RNA–Protein interactions for RNA: ENST00000323205.10

GCAT-202, Transcript of glycine C-acetyltransferase, humanhuman

TSL 2 BASIC

Gene GCAT, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCAT-202ENST00000323205 NISCHQ9Y2I1 1504 aa41.07■■■■■ 4.17
GCAT-202ENST00000323205 CCDC180Q9P1Z9 1646 aa36.17■■■■□ 3.38
GCAT-202ENST00000323205 ABCC9O60706 1549 aa34.83■■■■□ 3.17
GCAT-202ENST00000323205 ZCCHC6Q5VYS8 1495 aaKnown RBP34.35■■■■□ 3.09
GCAT-202ENST00000323205 DCAF8L2P0C7V8 631 aa34.1■■■■□ 3.05
GCAT-202ENST00000323205 DCAF1Q9Y4B6 1507 aa33.98■■■■□ 3.03
GCAT-202ENST00000323205 MYO15BQ96JP2 1530 aa33.88■■■■□ 3.01
GCAT-202ENST00000323205 NACADO15069 1562 aa33.87■■■■□ 3.01
GCAT-202ENST00000323205 RB1CC1Q8TDY2 1594 aa33.74■■■□□ 2.99
GCAT-202ENST00000323205 SCRIBQ14160 1630 aa33.11■■■□□ 2.89
GCAT-202ENST00000323205 UNC13AQ9UPW8 1703 aa33■■■□□ 2.87
GCAT-202ENST00000323205 SHROOM4Q9ULL8 1493 aa32.91■■■□□ 2.86
GCAT-202ENST00000323205 BICRAQ9NZM4 1560 aa32.75■■■□□ 2.83
GCAT-202ENST00000323205 PABPN1Q86U42 306 aaKnown RBP eCLIP32.7■■■□□ 2.83
GCAT-202ENST00000323205 CECR2Q9BXF3 1484 aa31.96■■■□□ 2.71
GCAT-202ENST00000323205 EIF4G1Q04637 1599 aaKnown RBP31.81■■■□□ 2.68
GCAT-202ENST00000323205 BAZ1AQ9NRL2 1556 aaPredicted RBP31.77■■■□□ 2.68
GCAT-202ENST00000323205 SMARCA4P51532 1647 aa31.72■■■□□ 2.67
GCAT-202ENST00000323205 MROH2BQ7Z745 1585 aa31.69■■■□□ 2.66
GCAT-202ENST00000323205 RSF1Q96T23 1441 aaPredicted RBP31.57■■■□□ 2.64
GCAT-202ENST00000323205 CC2D2AQ9P2K1 1620 aa31.52■■■□□ 2.64
GCAT-202ENST00000323205 DNAJC5BQ9UF47 199 aa31.44■■■□□ 2.62
GCAT-202ENST00000323205 ATAD2BQ9ULI0 1458 aa31.4■■■□□ 2.62
GCAT-202ENST00000323205 PEG3Q9GZU2 1588 aa31.39■■■□□ 2.62
GCAT-202ENST00000323205 WIZO95785 1651 aa31.37■■■□□ 2.61
GCAT-202ENST00000323205 SMARCA2P51531 1590 aa31.36■■■□□ 2.61
GCAT-202ENST00000323205 SUPT5HO00267 1087 aaKnown RBP31.29■■■□□ 2.6
GCAT-202ENST00000323205 NCAPD3P42695 1498 aa31.27■■■□□ 2.6
GCAT-202ENST00000323205 BAZ1BQ9UIG0 1483 aaKnown RBP31.16■■■□□ 2.58
GCAT-202ENST00000323205 HMGXB3Q12766 1538 aa31.15■■■□□ 2.58
GCAT-202ENST00000323205 TOP2AP11388 1531 aaKnown RBP31.05■■■□□ 2.56
GCAT-202ENST00000323205 CCDC88BA6NC98 1476 aa30.72■■■□□ 2.51
GCAT-202ENST00000323205 CADPSQ9ULU8 1353 aa30.41■■■□□ 2.46
GCAT-202ENST00000323205 CFTRP13569 1480 aa30.36■■■□□ 2.45
GCAT-202ENST00000323205 NESP48681 1621 aa30.35■■■□□ 2.45
GCAT-202ENST00000323205 LAMC3Q9Y6N6 1575 aa30.32■■■□□ 2.44
GCAT-202ENST00000323205 PRDM2Q13029 1718 aa30.12■■■□□ 2.41
GCAT-202ENST00000323205 PDS5BQ9NTI5 1447 aa30.1■■■□□ 2.41
GCAT-202ENST00000323205 FANCD2Q9BXW9 1451 aa30.05■■■□□ 2.4
GCAT-202ENST00000323205 KIF21AQ7Z4S6 1674 aa29.97■■■□□ 2.39
GCAT-202ENST00000323205 ERCC6Q03468 1493 aa29.94■■■□□ 2.38
GCAT-202ENST00000323205 CEP164Q9UPV0 1460 aa29.94■■■□□ 2.38
GCAT-202ENST00000323205 ABCC8Q09428 1581 aa29.8■■■□□ 2.36
GCAT-202ENST00000323205 MRC2Q9UBG0 1479 aa29.75■■■□□ 2.35
GCAT-202ENST00000323205 WRNQ14191 1432 aaPredicted RBP eCLIP29.72■■■□□ 2.351e-6■■■■■ 58.5
GCAT-202ENST00000323205 URB2Q14146 1524 aaKnown RBP29.72■■■□□ 2.35
GCAT-202ENST00000323205 THOC2Q8NI27 1593 aaKnown RBP29.71■■■□□ 2.35
GCAT-202ENST00000323205 CUX1P39880 1505 aa29.68■■■□□ 2.34
GCAT-202ENST00000323205 DNMBPQ6XZF7 1577 aa29.65■■■□□ 2.34
GCAT-202ENST00000323205 TOPBP1Q92547 1522 aa29.64■■■□□ 2.34
GCAT-202ENST00000323205 WDR62O43379 1518 aa29.63■■■□□ 2.33
GCAT-202ENST00000323205 SYNJ1O43426 1573 aa29.63■■■□□ 2.33
GCAT-202ENST00000323205 CHIC1Q5VXU3 224 aa29.6■■■□□ 2.33
GCAT-202ENST00000323205 TOP2BQ02880 1626 aa29.58■■■□□ 2.33
GCAT-202ENST00000323205 BIVM-ERCC5R4GMW8 1640 aa29.56■■■□□ 2.32
GCAT-202ENST00000323205 TRIM41Q8WV44 630 aa29.5■■■□□ 2.31
GCAT-202ENST00000323205 FGD5Q6ZNL6 1462 aa29.46■■■□□ 2.31
GCAT-202ENST00000323205 POLA1P09884 1462 aaPredicted RBP29.44■■■□□ 2.3
GCAT-202ENST00000323205 CUX2O14529 1486 aa29.38■■■□□ 2.29
GCAT-202ENST00000323205 SOGA1O94964 1423 aa29.34■■■□□ 2.29
GCAT-202ENST00000323205 RAD54L2Q9Y4B4 1467 aa29.33■■■□□ 2.29
GCAT-202ENST00000323205 IFT140Q96RY7 1462 aa29.27■■■□□ 2.28
GCAT-202ENST00000323205 TARBP1Q13395 1621 aaKnown RBP29.27■■■□□ 2.28
GCAT-202ENST00000323205 ABCA10Q8WWZ4 1543 aa29.2■■■□□ 2.27
GCAT-202ENST00000323205 WDR97A6NE52 1622 aa29.16■■■□□ 2.26
GCAT-202ENST00000323205 ZNF608Q9ULD9 1512 aaPredicted RBP29.13■■■□□ 2.25
GCAT-202ENST00000323205 TDRD9Q8NDG6 1382 aaKnown RBP29.11■■■□□ 2.25
GCAT-202ENST00000323205 AQRO60306 1485 aaKnown RBP eCLIP29.06■■■□□ 2.242e-7■■■■□ 24.2
GCAT-202ENST00000323205 KIF27Q86VH2 1401 aa29.04■■■□□ 2.24
GCAT-202ENST00000323205 RUSC2Q8N2Y8 1516 aa29.04■■■□□ 2.24
GCAT-202ENST00000323205 ABCA5Q8WWZ7 1642 aa29.02■■■□□ 2.24
GCAT-202ENST00000323205 EIF4G3O43432 1585 aaKnown RBP29.01■■■□□ 2.23
GCAT-202ENST00000323205 GAPVD1Q14C86 1478 aa29■■■□□ 2.23
GCAT-202ENST00000323205 EEA1Q15075 1411 aa28.9■■■□□ 2.22
GCAT-202ENST00000323205 FAM9AQ8IZU1 332 aaPredicted RBP28.9■■■□□ 2.22
GCAT-202ENST00000323205 GRIN2BQ13224 1484 aa28.89■■■□□ 2.22
GCAT-202ENST00000323205 IGF1RP08069 1367 aa28.88■■■□□ 2.21
GCAT-202ENST00000323205 PBRM1Q86U86 1689 aa28.87■■■□□ 2.21
GCAT-202ENST00000323205 ERICH3Q5RHP9 1530 aa28.85■■■□□ 2.21
GCAT-202ENST00000323205 CSRNP3Q8WYN3 585 aa28.82■■■□□ 2.2
GCAT-202ENST00000323205 SNAPC4Q5SXM2 1469 aa28.78■■■□□ 2.2
GCAT-202ENST00000323205 MAGI1Q96QZ7 1491 aaPredicted RBP28.74■■■□□ 2.19
GCAT-202ENST00000323205 CARMIL1Q5VZK9 1371 aa28.71■■■□□ 2.19
GCAT-202ENST00000323205 CUL7Q14999 1698 aa28.7■■■□□ 2.18
GCAT-202ENST00000323205 ADAMTS12P58397 1594 aa28.69■■■□□ 2.18
GCAT-202ENST00000323205 FHAD1B1AJZ9 1412 aa28.68■■■□□ 2.18
GCAT-202ENST00000323205 PRXQ9BXM0 1461 aa28.67■■■□□ 2.18
GCAT-202ENST00000323205 SYNJ2O15056 1496 aa28.63■■■□□ 2.17
GCAT-202ENST00000323205 RAPGEF2Q9Y4G8 1499 aa28.6■■■□□ 2.17
GCAT-202ENST00000323205 CHMP7Q8WUX9 453 aaPredicted RBP28.59■■■□□ 2.17
GCAT-202ENST00000323205 FBLN2P98095 1184 aa28.58■■■□□ 2.16
GCAT-202ENST00000323205 KIF21BO75037 1637 aa28.56■■■□□ 2.16
GCAT-202ENST00000323205 GRIN2AQ12879 1464 aa28.54■■■□□ 2.16
GCAT-202ENST00000323205 CHD1O14646 1710 aa28.51■■■□□ 2.16
GCAT-202ENST00000323205 EHMT2Q96KQ7 1210 aa28.5■■■□□ 2.15
GCAT-202ENST00000323205 GOLGA3Q08378 1498 aa28.46■■■□□ 2.15
GCAT-202ENST00000323205 LOC105371045A0A1W2PR82 267 aa28.42■■■□□ 2.14
GCAT-202ENST00000323205 NUP160Q12769 1436 aa28.39■■■□□ 2.13
GCAT-202ENST00000323205 CEP170Q5SW79 1584 aa28.37■■■□□ 2.13
GCAT-202ENST00000323205 UBTFP17480 764 aaKnown RBP28.35■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms