RNA–Protein interactions for RNA: ENST00000402506.5

LFNG-205, Transcript of LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase, humanhuman

TSL 2 BASIC

Gene LFNG, Length 2,268 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LFNG-205ENST00000402506 NISCHQ9Y2I1 1504 aa34.22■■■■□ 3.07
LFNG-205ENST00000402506 CCDC180Q9P1Z9 1646 aa29.23■■■□□ 2.27
LFNG-205ENST00000402506 SHROOM4Q9ULL8 1493 aa28.95■■■□□ 2.22
LFNG-205ENST00000402506 ZCCHC6Q5VYS8 1495 aaKnown RBP28.93■■■□□ 2.22
LFNG-205ENST00000402506 SUPT5HO00267 1087 aaKnown RBP28.32■■■□□ 2.12
LFNG-205ENST00000402506 DCAF8L2P0C7V8 631 aa28.26■■■□□ 2.11
LFNG-205ENST00000402506 DCAF1Q9Y4B6 1507 aa28.13■■■□□ 2.09
LFNG-205ENST00000402506 CHIC1Q5VXU3 224 aa27.52■■■□□ 2
LFNG-205ENST00000402506 MYO15BQ96JP2 1530 aa27.39■■□□□ 1.98
LFNG-205ENST00000402506 SCRIBQ14160 1630 aa27.29■■□□□ 1.96
LFNG-205ENST00000402506 ABCC9O60706 1549 aa27.27■■□□□ 1.96
LFNG-205ENST00000402506 NACADO15069 1562 aa27.02■■□□□ 1.92
LFNG-205ENST00000402506 RSF1Q96T23 1441 aaPredicted RBP27■■□□□ 1.91
LFNG-205ENST00000402506 RB1CC1Q8TDY2 1594 aa26.71■■□□□ 1.87
LFNG-205ENST00000402506 LOC105371045A0A1W2PR82 267 aa26.67■■□□□ 1.86
LFNG-205ENST00000402506 CECR2Q9BXF3 1484 aa26.67■■□□□ 1.86
LFNG-205ENST00000402506 MROH2BQ7Z745 1585 aa26.58■■□□□ 1.85
LFNG-205ENST00000402506 PCGF6Q9BYE7 350 aa26.48■■□□□ 1.83
LFNG-205ENST00000402506 WIZO95785 1651 aa26.45■■□□□ 1.83
LFNG-205ENST00000402506 TRIM41Q8WV44 630 aa26.42■■□□□ 1.82
LFNG-205ENST00000402506 HRCP23327 699 aa26.42■■□□□ 1.82
LFNG-205ENST00000402506 BAZ1AQ9NRL2 1556 aaPredicted RBP26.3■■□□□ 1.8
LFNG-205ENST00000402506 UNC13AQ9UPW8 1703 aa26.27■■□□□ 1.8
LFNG-205ENST00000402506 FAM9AQ8IZU1 332 aaPredicted RBP26.15■■□□□ 1.78
LFNG-205ENST00000402506 SMARCA4P51532 1647 aa26.11■■□□□ 1.77
LFNG-205ENST00000402506 EIF4G1Q04637 1599 aaKnown RBP26.06■■□□□ 1.76
LFNG-205ENST00000402506 TRIM26Q12899 539 aaPredicted RBP26.05■■□□□ 1.76
LFNG-205ENST00000402506 TOP2AP11388 1531 aaKnown RBP26.04■■□□□ 1.76
LFNG-205ENST00000402506 CCDC88BA6NC98 1476 aa25.9■■□□□ 1.74
LFNG-205ENST00000402506 SMARCA2P51531 1590 aa25.89■■□□□ 1.74
LFNG-205ENST00000402506 BICRAQ9NZM4 1560 aa25.89■■□□□ 1.74
LFNG-205ENST00000402506 EHMT2Q96KQ7 1210 aa25.89■■□□□ 1.73
LFNG-205ENST00000402506 PPARGC1BQ86YN6 1023 aaKnown RBP25.85■■□□□ 1.73
LFNG-205ENST00000402506 PABPN1Q86U42 306 aaKnown RBP eCLIP25.83■■□□□ 1.72
LFNG-205ENST00000402506 ABCC8Q09428 1581 aa25.77■■□□□ 1.72
LFNG-205ENST00000402506 PEG3Q9GZU2 1588 aa25.64■■□□□ 1.7
LFNG-205ENST00000402506 SOGA1O94964 1423 aa25.49■■□□□ 1.67
LFNG-205ENST00000402506 ATAD2BQ9ULI0 1458 aa25.44■■□□□ 1.66
LFNG-205ENST00000402506 ZEB1P37275 1124 aaPredicted RBP25.42■■□□□ 1.66
LFNG-205ENST00000402506 RUSC2Q8N2Y8 1516 aa25.38■■□□□ 1.65
LFNG-205ENST00000402506 EEA1Q15075 1411 aa25.37■■□□□ 1.65
LFNG-205ENST00000402506 WRNQ14191 1432 aaPredicted RBP eCLIP25.35■■□□□ 1.65
LFNG-205ENST00000402506 BAZ1BQ9UIG0 1483 aaKnown RBP25.35■■□□□ 1.65
LFNG-205ENST00000402506 CSRNP3Q8WYN3 585 aa25.33■■□□□ 1.64
LFNG-205ENST00000402506 CEP162Q5TB80 1403 aa25.31■■□□□ 1.64
LFNG-205ENST00000402506 TNIKQ9UKE5 1360 aa25.3■■□□□ 1.64
LFNG-205ENST00000402506 SYNJ1O43426 1573 aa25.27■■□□□ 1.64
LFNG-205ENST00000402506 UBTFP17480 764 aaKnown RBP25.18■■□□□ 1.62
LFNG-205ENST00000402506 GOLGA3Q08378 1498 aa25.18■■□□□ 1.62
LFNG-205ENST00000402506 KIF21BO75037 1637 aa25.07■■□□□ 1.6
LFNG-205ENST00000402506 CEP164Q9UPV0 1460 aa25.06■■□□□ 1.6
LFNG-205ENST00000402506 TTBK1Q5TCY1 1321 aaPredicted RBP25.03■■□□□ 1.6
LFNG-205ENST00000402506 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.01■■□□□ 1.59
LFNG-205ENST00000402506 TOP2BQ02880 1626 aa24.99■■□□□ 1.59
LFNG-205ENST00000402506 HMGXB3Q12766 1538 aa24.99■■□□□ 1.59
LFNG-205ENST00000402506 NCAPD3P42695 1498 aa24.98■■□□□ 1.59
LFNG-205ENST00000402506 CCER1Q8TC90 406 aaPredicted RBP24.93■■□□□ 1.58
LFNG-205ENST00000402506 BIVM-ERCC5R4GMW8 1640 aa24.93■■□□□ 1.58
LFNG-205ENST00000402506 RAPGEF2Q9Y4G8 1499 aa24.89■■□□□ 1.57
LFNG-205ENST00000402506 CLIP1P30622 1438 aa24.87■■□□□ 1.57
LFNG-205ENST00000402506 CUX1P39880 1505 aa24.76■■□□□ 1.55
LFNG-205ENST00000402506 VPS8Q8N3P4 1428 aa24.76■■□□□ 1.55
LFNG-205ENST00000402506 CFTRP13569 1480 aa24.75■■□□□ 1.55
LFNG-205ENST00000402506 ERICH3Q5RHP9 1530 aa24.69■■□□□ 1.54
LFNG-205ENST00000402506 PRXQ9BXM0 1461 aa24.69■■□□□ 1.54
LFNG-205ENST00000402506 RANGAP1P46060 587 aaPredicted RBP24.66■■□□□ 1.54
LFNG-205ENST00000402506 PRDM2Q13029 1718 aa24.63■■□□□ 1.53
LFNG-205ENST00000402506 KIF27Q86VH2 1401 aa24.59■■□□□ 1.53
LFNG-205ENST00000402506 APLP2Q06481 763 aa24.58■■□□□ 1.53
LFNG-205ENST00000402506 CC2D2AQ9P2K1 1620 aa24.56■■□□□ 1.52
LFNG-205ENST00000402506 HNRNPUL2Q1KMD3 747 aaKnown RBP24.52■■□□□ 1.52
LFNG-205ENST00000402506 ARAP1Q96P48 1450 aa24.51■■□□□ 1.51
LFNG-205ENST00000402506 CADPSQ9ULU8 1353 aa24.47■■□□□ 1.51
LFNG-205ENST00000402506 DIEXFQ68CQ4 756 aaKnown RBP24.37■■□□□ 1.49
LFNG-205ENST00000402506 CUX2O14529 1486 aa24.37■■□□□ 1.49
LFNG-205ENST00000402506 IGF1RP08069 1367 aa24.34■■□□□ 1.49
LFNG-205ENST00000402506 FGD5Q6ZNL6 1462 aa24.32■■□□□ 1.48
LFNG-205ENST00000402506 ARHGAP35Q9NRY4 1499 aa24.32■■□□□ 1.48
LFNG-205ENST00000402506 KANK4Q5T7N3 995 aaPredicted RBP24.32■■□□□ 1.48
LFNG-205ENST00000402506 ZNF316A6NFI3 1004 aaPredicted RBP24.25■■□□□ 1.47
LFNG-205ENST00000402506 FANCD2Q9BXW9 1451 aa24.24■■□□□ 1.47
LFNG-205ENST00000402506 CARMIL1Q5VZK9 1371 aa24.22■■□□□ 1.47
LFNG-205ENST00000402506 SCAF1Q9H7N4 1312 aaKnown RBP24.22■■□□□ 1.47
LFNG-205ENST00000402506 RRBP1Q9P2E9 1410 aaKnown RBP24.17■■□□□ 1.46
LFNG-205ENST00000402506 DNMBPQ6XZF7 1577 aa24.13■■□□□ 1.45
LFNG-205ENST00000402506 NESP48681 1621 aa24.1■■□□□ 1.45
LFNG-205ENST00000402506 DNAJC5BQ9UF47 199 aa24.08■■□□□ 1.45
LFNG-205ENST00000402506 DHX57Q6P158 1386 aaKnown RBP24.08■■□□□ 1.45
LFNG-205ENST00000402506 RAD54L2Q9Y4B4 1467 aa24.08■■□□□ 1.45
LFNG-205ENST00000402506 TOPBP1Q92547 1522 aa24.08■■□□□ 1.45
LFNG-205ENST00000402506 ACIN1Q9UKV3 1341 aaKnown RBP24.06■■□□□ 1.44
LFNG-205ENST00000402506 ABCA10Q8WWZ4 1543 aa24.06■■□□□ 1.44
LFNG-205ENST00000402506 POLA1P09884 1462 aaPredicted RBP24.06■■□□□ 1.44
LFNG-205ENST00000402506 CCNB3Q8WWL7 1395 aa24.06■■□□□ 1.44
LFNG-205ENST00000402506 TIAM1Q13009 1591 aa24.05■■□□□ 1.44
LFNG-205ENST00000402506 CLSPNQ9HAW4 1339 aa24.05■■□□□ 1.44
LFNG-205ENST00000402506 NEUROD1Q13562 356 aa24.04■■□□□ 1.44
LFNG-205ENST00000402506 MAP3K1Q13233 1512 aa24.04■■□□□ 1.44
LFNG-205ENST00000402506 LAMC3Q9Y6N6 1575 aa23.95■■□□□ 1.42
LFNG-205ENST00000402506 LRRC9Q6ZRR7 1453 aa23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 146.7 ms