RNA–Protein interactions for RNA: ENST00000376757.9

SSH3-203, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 2 BASIC

Gene SSH3, Length 2,990 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-203ENST00000376757 NISCHQ9Y2I1 1504 aa31.06■■■□□ 2.56
SSH3-203ENST00000376757 SHROOM4Q9ULL8 1493 aa27.74■■■□□ 2.03
SSH3-203ENST00000376757 SUPT5HO00267 1087 aaKnown RBP27.39■■□□□ 1.97
SSH3-203ENST00000376757 DCAF8L2P0C7V8 631 aa26.73■■□□□ 1.87
SSH3-203ENST00000376757 MYO15BQ96JP2 1530 aa26.48■■□□□ 1.83
SSH3-203ENST00000376757 CHIC1Q5VXU3 224 aa26.42■■□□□ 1.82
SSH3-203ENST00000376757 PCGF6Q9BYE7 350 aa26.39■■□□□ 1.82
SSH3-203ENST00000376757 HRCP23327 699 aa26.3■■□□□ 1.8
SSH3-203ENST00000376757 ZCCHC6Q5VYS8 1495 aaKnown RBP26.27■■□□□ 1.8
SSH3-203ENST00000376757 PPARGC1BQ86YN6 1023 aaKnown RBP26.22■■□□□ 1.79
SSH3-203ENST00000376757 LOC105371045A0A1W2PR82 267 aa26.04■■□□□ 1.76
SSH3-203ENST00000376757 CCDC180Q9P1Z9 1646 aa25.77■■□□□ 1.72
SSH3-203ENST00000376757 EHMT2Q96KQ7 1210 aa25.6■■□□□ 1.69
SSH3-203ENST00000376757 FAM9AQ8IZU1 332 aaPredicted RBP25.45■■□□□ 1.67
SSH3-203ENST00000376757 DCAF1Q9Y4B6 1507 aa25.38■■□□□ 1.65
SSH3-203ENST00000376757 TRIM26Q12899 539 aaPredicted RBP25.35■■□□□ 1.65
SSH3-203ENST00000376757 TRIM41Q8WV44 630 aa25.17■■□□□ 1.62
SSH3-203ENST00000376757 SCRIBQ14160 1630 aa24.95■■□□□ 1.58
SSH3-203ENST00000376757 RSF1Q96T23 1441 aaPredicted RBP24.92■■□□□ 1.58
SSH3-203ENST00000376757 ABCC9O60706 1549 aa24.85■■□□□ 1.57
SSH3-203ENST00000376757 RB1CC1Q8TDY2 1594 aa24.81■■□□□ 1.56
SSH3-203ENST00000376757 TTBK1Q5TCY1 1321 aaPredicted RBP24.8■■□□□ 1.56
SSH3-203ENST00000376757 ZEB1P37275 1124 aaPredicted RBP24.75■■□□□ 1.55
SSH3-203ENST00000376757 SCAF1Q9H7N4 1312 aaKnown RBP24.72■■□□□ 1.55
SSH3-203ENST00000376757 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.69■■□□□ 1.54
SSH3-203ENST00000376757 CECR2Q9BXF3 1484 aa24.57■■□□□ 1.52
SSH3-203ENST00000376757 CCER1Q8TC90 406 aaPredicted RBP24.51■■□□□ 1.51
SSH3-203ENST00000376757 MROH2BQ7Z745 1585 aa24.39■■□□□ 1.49
SSH3-203ENST00000376757 NEUROD1Q13562 356 aa24.3■■□□□ 1.48
SSH3-203ENST00000376757 WIZO95785 1651 aa24.29■■□□□ 1.48
SSH3-203ENST00000376757 DIEXFQ68CQ4 756 aaKnown RBP24.18■■□□□ 1.46
SSH3-203ENST00000376757 ACIN1Q9UKV3 1341 aaKnown RBP24.16■■□□□ 1.46
SSH3-203ENST00000376757 PELP1Q8IZL8 1130 aaKnown RBP24.13■■□□□ 1.45
SSH3-203ENST00000376757 GTF3C3Q9Y5Q9 886 aa24.12■■□□□ 1.45
SSH3-203ENST00000376757 ABCC8Q09428 1581 aa24.08■■□□□ 1.45
SSH3-203ENST00000376757 YTHDC1Q96MU7 727 aaKnown RBP24.06■■□□□ 1.44
SSH3-203ENST00000376757 UBTFP17480 764 aaKnown RBP24.05■■□□□ 1.44
SSH3-203ENST00000376757 CCDC88BA6NC98 1476 aa24.02■■□□□ 1.44
SSH3-203ENST00000376757 SOGA1O94964 1423 aa23.97■■□□□ 1.43
SSH3-203ENST00000376757 RANGAP1P46060 587 aaPredicted RBP23.96■■□□□ 1.43
SSH3-203ENST00000376757 CEP162Q5TB80 1403 aa23.92■■□□□ 1.42
SSH3-203ENST00000376757 HNRNPUL2Q1KMD3 747 aaKnown RBP23.91■■□□□ 1.42
SSH3-203ENST00000376757 NACADO15069 1562 aa23.9■■□□□ 1.42
SSH3-203ENST00000376757 CENPBP07199 599 aaPredicted RBP23.89■■□□□ 1.41
SSH3-203ENST00000376757 RUSC2Q8N2Y8 1516 aa23.88■■□□□ 1.41
SSH3-203ENST00000376757 BAZ1AQ9NRL2 1556 aaPredicted RBP23.84■■□□□ 1.41
SSH3-203ENST00000376757 CSRNP3Q8WYN3 585 aa23.79■■□□□ 1.4
SSH3-203ENST00000376757 EIF4G1Q04637 1599 aaKnown RBP23.77■■□□□ 1.4
SSH3-203ENST00000376757 PABPN1Q86U42 306 aaKnown RBP eCLIP23.75■■□□□ 1.39
SSH3-203ENST00000376757 ZNF316A6NFI3 1004 aaPredicted RBP23.74■■□□□ 1.39
SSH3-203ENST00000376757 MIER1Q8N108 512 aa23.69■■□□□ 1.38
SSH3-203ENST00000376757 TNIKQ9UKE5 1360 aa23.66■■□□□ 1.38
SSH3-203ENST00000376757 WRNQ14191 1432 aaPredicted RBP eCLIP23.66■■□□□ 1.38
SSH3-203ENST00000376757 TOP2AP11388 1531 aaKnown RBP23.62■■□□□ 1.37
SSH3-203ENST00000376757 SMARCA2P51531 1590 aa23.61■■□□□ 1.37
SSH3-203ENST00000376757 SMARCA4P51532 1647 aa23.54■■□□□ 1.36
SSH3-203ENST00000376757 GOLGA3Q08378 1498 aa23.46■■□□□ 1.35
SSH3-203ENST00000376757 APLP2Q06481 763 aa23.46■■□□□ 1.35
SSH3-203ENST00000376757 CLIP1P30622 1438 aa23.39■■□□□ 1.33
SSH3-203ENST00000376757 EEA1Q15075 1411 aa23.33■■□□□ 1.33
SSH3-203ENST00000376757 UNC13AQ9UPW8 1703 aa23.27■■□□□ 1.32
SSH3-203ENST00000376757 SYNJ1O43426 1573 aa23.27■■□□□ 1.32
SSH3-203ENST00000376757 RAPGEF2Q9Y4G8 1499 aa23.27■■□□□ 1.32
SSH3-203ENST00000376757 ITGAEP38570 1179 aa23.27■■□□□ 1.32
SSH3-203ENST00000376757 CEP164Q9UPV0 1460 aa23.24■■□□□ 1.31
SSH3-203ENST00000376757 VPS8Q8N3P4 1428 aa23.2■■□□□ 1.3
SSH3-203ENST00000376757 KANK4Q5T7N3 995 aaPredicted RBP23.17■■□□□ 1.3
SSH3-203ENST00000376757 KIF21BO75037 1637 aa23.05■■□□□ 1.28
SSH3-203ENST00000376757 KCNH8Q96L42 1107 aa23.04■■□□□ 1.28
SSH3-203ENST00000376757 DHX57Q6P158 1386 aaKnown RBP23.03■■□□□ 1.28
SSH3-203ENST00000376757 BICRAQ9NZM4 1560 aa23■■□□□ 1.27
SSH3-203ENST00000376757 SUPT16HQ9Y5B9 1047 aaKnown RBP22.98■■□□□ 1.27
SSH3-203ENST00000376757 BAZ1BQ9UIG0 1483 aaKnown RBP22.97■■□□□ 1.27
SSH3-203ENST00000376757 BCANQ96GW7 911 aa22.95■■□□□ 1.26
SSH3-203ENST00000376757 ATAD2BQ9ULI0 1458 aa22.94■■□□□ 1.26
SSH3-203ENST00000376757 HIRIP3Q9BW71 556 aaPredicted RBP22.87■■□□□ 1.25
SSH3-203ENST00000376757 ARAP1Q96P48 1450 aa22.85■■□□□ 1.25
SSH3-203ENST00000376757 MYT1Q01538 1121 aa22.84■■□□□ 1.25
SSH3-203ENST00000376757 ATP1B4Q9UN42 357 aaPredicted RBP22.83■■□□□ 1.25
SSH3-203ENST00000376757 P3H3Q8IVL6 736 aa22.77■■□□□ 1.24
SSH3-203ENST00000376757 SIN3AQ96ST3 1273 aa22.77■■□□□ 1.24
SSH3-203ENST00000376757 PEG3Q9GZU2 1588 aa22.76■■□□□ 1.23
SSH3-203ENST00000376757 DDX10Q13206 875 aaKnown RBP22.76■■□□□ 1.23
SSH3-203ENST00000376757 FAM50AQ14320 339 aaKnown RBP22.73■■□□□ 1.23
SSH3-203ENST00000376757 CCNB3Q8WWL7 1395 aa22.72■■□□□ 1.23
SSH3-203ENST00000376757 TOP2BQ02880 1626 aa22.72■■□□□ 1.23
SSH3-203ENST00000376757 TSHZ2Q9NRE2 1034 aa22.72■■□□□ 1.23
SSH3-203ENST00000376757 CLSPNQ9HAW4 1339 aa22.71■■□□□ 1.23
SSH3-203ENST00000376757 PRXQ9BXM0 1461 aa22.71■■□□□ 1.23
SSH3-203ENST00000376757 RAB3GAP2Q9H2M9 1393 aa22.68■■□□□ 1.22
SSH3-203ENST00000376757 FKBP8Q14318 412 aa22.64■■□□□ 1.21
SSH3-203ENST00000376757 TRIM52Q96A61 297 aa22.63■■□□□ 1.21
SSH3-203ENST00000376757 RRBP1Q9P2E9 1410 aaKnown RBP22.62■■□□□ 1.21
SSH3-203ENST00000376757 ARHGAP35Q9NRY4 1499 aa22.61■■□□□ 1.21
SSH3-203ENST00000376757 CUX1P39880 1505 aa22.61■■□□□ 1.21
SSH3-203ENST00000376757 KIF27Q86VH2 1401 aa22.6■■□□□ 1.21
SSH3-203ENST00000376757 ERICH3Q5RHP9 1530 aa22.55■■□□□ 1.2
SSH3-203ENST00000376757 BIVM-ERCC5R4GMW8 1640 aa22.51■■□□□ 1.19
SSH3-203ENST00000376757 MAPKBP1O60336 1514 aa22.49■■□□□ 1.19
SSH3-203ENST00000376757 PHLDB1Q86UU1 1377 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms