RNA–Protein interactions for RNA: ENST00000627680.2

CCNC-219, Transcript of cyclin C, humanhuman

TSL 5 BASIC

Gene CCNC, Length 896 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-219ENST00000627680 NISCHQ9Y2I1 1504 aa43.69■■■■■ 4.59
CCNC-219ENST00000627680 CCDC180Q9P1Z9 1646 aa38.85■■■■□ 3.81
CCNC-219ENST00000627680 ABCC9O60706 1549 aa38.29■■■■□ 3.72
CCNC-219ENST00000627680 RB1CC1Q8TDY2 1594 aa36.72■■■■□ 3.47
CCNC-219ENST00000627680 NACADO15069 1562 aa36.66■■■■□ 3.46
CCNC-219ENST00000627680 DCAF8L2P0C7V8 631 aa36.58■■■■□ 3.45
CCNC-219ENST00000627680 MYO15BQ96JP2 1530 aa36.42■■■■□ 3.42
CCNC-219ENST00000627680 ZCCHC6Q5VYS8 1495 aaKnown RBP36.35■■■■□ 3.41
CCNC-219ENST00000627680 DCAF1Q9Y4B6 1507 aa36.16■■■■□ 3.38
CCNC-219ENST00000627680 PABPN1Q86U42 306 aaKnown RBP eCLIP35.78■■■■□ 3.32
CCNC-219ENST00000627680 UNC13AQ9UPW8 1703 aa35.77■■■■□ 3.32
CCNC-219ENST00000627680 BICRAQ9NZM4 1560 aa35.64■■■■□ 3.3
CCNC-219ENST00000627680 SCRIBQ14160 1630 aa35.44■■■■□ 3.26
CCNC-219ENST00000627680 DNAJC5BQ9UF47 199 aa35.42■■■■□ 3.26
CCNC-219ENST00000627680 SHROOM4Q9ULL8 1493 aa35.29■■■■□ 3.24
CCNC-219ENST00000627680 EIF4G1Q04637 1599 aaKnown RBP34.71■■■■□ 3.15
CCNC-219ENST00000627680 CC2D2AQ9P2K1 1620 aa34.6■■■■□ 3.13
CCNC-219ENST00000627680 CECR2Q9BXF3 1484 aa34.45■■■■□ 3.1
CCNC-219ENST00000627680 SMARCA4P51532 1647 aa33.9■■■■□ 3.02
CCNC-219ENST00000627680 NCAPD3P42695 1498 aa33.88■■■■□ 3.01
CCNC-219ENST00000627680 BAZ1AQ9NRL2 1556 aaPredicted RBP33.85■■■■□ 3.01
CCNC-219ENST00000627680 ATAD2BQ9ULI0 1458 aa33.84■■■■□ 3.01
CCNC-219ENST00000627680 SMARCA2P51531 1590 aa33.75■■■□□ 2.99
CCNC-219ENST00000627680 MROH2BQ7Z745 1585 aa33.66■■■□□ 2.98
CCNC-219ENST00000627680 HMGXB3Q12766 1538 aa33.63■■■□□ 2.97
CCNC-219ENST00000627680 PEG3Q9GZU2 1588 aa33.62■■■□□ 2.97
CCNC-219ENST00000627680 BAZ1BQ9UIG0 1483 aaKnown RBP33.51■■■□□ 2.96
CCNC-219ENST00000627680 RSF1Q96T23 1441 aaPredicted RBP33.24■■■□□ 2.91
CCNC-219ENST00000627680 WIZO95785 1651 aa33.22■■■□□ 2.91
CCNC-219ENST00000627680 NESP48681 1621 aa33.07■■■□□ 2.88
CCNC-219ENST00000627680 ERCC6Q03468 1493 aa33.01■■■□□ 2.88
CCNC-219ENST00000627680 LAMC3Q9Y6N6 1575 aa32.95■■■□□ 2.86
CCNC-219ENST00000627680 TOP2AP11388 1531 aaKnown RBP32.9■■■□□ 2.86
CCNC-219ENST00000627680 CADPSQ9ULU8 1353 aa32.87■■■□□ 2.85
CCNC-219ENST00000627680 PDS5BQ9NTI5 1447 aa32.78■■■□□ 2.84
CCNC-219ENST00000627680 CUX2O14529 1486 aa32.78■■■□□ 2.84
CCNC-219ENST00000627680 CFTRP13569 1480 aa32.62■■■□□ 2.81
CCNC-219ENST00000627680 THOC2Q8NI27 1593 aaKnown RBP32.59■■■□□ 2.81
CCNC-219ENST00000627680 KIF21AQ7Z4S6 1674 aa32.58■■■□□ 2.81
CCNC-219ENST00000627680 CCDC88BA6NC98 1476 aa32.54■■■□□ 2.8
CCNC-219ENST00000627680 FANCD2Q9BXW9 1451 aa32.46■■■□□ 2.79
CCNC-219ENST00000627680 MRC2Q9UBG0 1479 aa32.43■■■□□ 2.78
CCNC-219ENST00000627680 CEP164Q9UPV0 1460 aa32.42■■■□□ 2.78
CCNC-219ENST00000627680 WDR62O43379 1518 aa32.33■■■□□ 2.77
CCNC-219ENST00000627680 SUPT5HO00267 1087 aaKnown RBP32.19■■■□□ 2.74
CCNC-219ENST00000627680 PRDM2Q13029 1718 aa32.17■■■□□ 2.74
CCNC-219ENST00000627680 URB2Q14146 1524 aaKnown RBP32.15■■■□□ 2.74
CCNC-219ENST00000627680 DNAJC5Q9H3Z4 198 aa32.08■■■□□ 2.73
CCNC-219ENST00000627680 TOPBP1Q92547 1522 aa31.91■■■□□ 2.7
CCNC-219ENST00000627680 ABCC8Q09428 1581 aa31.91■■■□□ 2.7
CCNC-219ENST00000627680 DNMBPQ6XZF7 1577 aa31.83■■■□□ 2.69
CCNC-219ENST00000627680 IFT140Q96RY7 1462 aa31.78■■■□□ 2.68
CCNC-219ENST00000627680 ZNF608Q9ULD9 1512 aaPredicted RBP31.65■■■□□ 2.66
CCNC-219ENST00000627680 POLA1P09884 1462 aaPredicted RBP31.64■■■□□ 2.66
CCNC-219ENST00000627680 CUX1P39880 1505 aa31.59■■■□□ 2.65
CCNC-219ENST00000627680 TARBP1Q13395 1621 aaKnown RBP31.56■■■□□ 2.64
CCNC-219ENST00000627680 SOGA1O94964 1423 aa31.51■■■□□ 2.64
CCNC-219ENST00000627680 FGD5Q6ZNL6 1462 aa31.51■■■□□ 2.63
CCNC-219ENST00000627680 RAD54L2Q9Y4B4 1467 aa31.5■■■□□ 2.63
CCNC-219ENST00000627680 EIF4G3O43432 1585 aaKnown RBP31.45■■■□□ 2.63
CCNC-219ENST00000627680 AQRO60306 1485 aaKnown RBP eCLIP31.45■■■□□ 2.62
CCNC-219ENST00000627680 OSCARQ8IYS5 282 aa31.41■■■□□ 2.62
CCNC-219ENST00000627680 TDRD9Q8NDG6 1382 aaKnown RBP31.37■■■□□ 2.61
CCNC-219ENST00000627680 WRNQ14191 1432 aaPredicted RBP eCLIP31.32■■■□□ 2.6
CCNC-219ENST00000627680 WDR97A6NE52 1622 aa31.3■■■□□ 2.6
CCNC-219ENST00000627680 TOP2BQ02880 1626 aa31.24■■■□□ 2.59
CCNC-219ENST00000627680 ABCA10Q8WWZ4 1543 aa31.22■■■□□ 2.59
CCNC-219ENST00000627680 SYNJ1O43426 1573 aa31.21■■■□□ 2.59
CCNC-219ENST00000627680 BIVM-ERCC5R4GMW8 1640 aa31.2■■■□□ 2.59
CCNC-219ENST00000627680 GRIN2BQ13224 1484 aa31.16■■■□□ 2.58
CCNC-219ENST00000627680 GAPVD1Q14C86 1478 aa31.14■■■□□ 2.57
CCNC-219ENST00000627680 SNAPC4Q5SXM2 1469 aa31.14■■■□□ 2.57
CCNC-219ENST00000627680 MAGI1Q96QZ7 1491 aaPredicted RBP31.1■■■□□ 2.57
CCNC-219ENST00000627680 FBLN2P98095 1184 aa31.1■■■□□ 2.57
CCNC-219ENST00000627680 ABCA5Q8WWZ7 1642 aa31.06■■■□□ 2.56
CCNC-219ENST00000627680 CHD1O14646 1710 aa31.04■■■□□ 2.56
CCNC-219ENST00000627680 CHMP7Q8WUX9 453 aaPredicted RBP31.01■■■□□ 2.55
CCNC-219ENST00000627680 SYNJ2O15056 1496 aa30.99■■■□□ 2.55
CCNC-219ENST00000627680 PBRM1Q86U86 1689 aa30.96■■■□□ 2.55
CCNC-219ENST00000627680 TRIM41Q8WV44 630 aa30.86■■■□□ 2.53
CCNC-219ENST00000627680 ARHGEF11O15085 1522 aa30.85■■■□□ 2.53
CCNC-219ENST00000627680 RIMBP3CA6NJZ7 1639 aa30.84■■■□□ 2.53
CCNC-219ENST00000627680 RIMBP3BA6NNM3 1639 aa30.84■■■□□ 2.53
CCNC-219ENST00000627680 RIMBP3Q9UFD9 1639 aa30.84■■■□□ 2.53
CCNC-219ENST00000627680 ERICH3Q5RHP9 1530 aa30.83■■■□□ 2.53
CCNC-219ENST00000627680 CLASP1Q7Z460 1538 aa30.8■■■□□ 2.52
CCNC-219ENST00000627680 FHAD1B1AJZ9 1412 aa30.79■■■□□ 2.52
CCNC-219ENST00000627680 ADAMTS12P58397 1594 aa30.78■■■□□ 2.52
CCNC-219ENST00000627680 GRIN2AQ12879 1464 aa30.76■■■□□ 2.51
CCNC-219ENST00000627680 KIF27Q86VH2 1401 aa30.69■■■□□ 2.5
CCNC-219ENST00000627680 NUP160Q12769 1436 aa30.66■■■□□ 2.5
CCNC-219ENST00000627680 IGF1RP08069 1367 aa30.63■■■□□ 2.49
CCNC-219ENST00000627680 CYB5RLQ6IPT4 315 aa30.61■■■□□ 2.49
CCNC-219ENST00000627680 ARAP1Q96P48 1450 aa30.61■■■□□ 2.49
CCNC-219ENST00000627680 CEP170Q5SW79 1584 aa30.58■■■□□ 2.49
CCNC-219ENST00000627680 CUL7Q14999 1698 aa30.44■■■□□ 2.46
CCNC-219ENST00000627680 CARMIL1Q5VZK9 1371 aa30.42■■■□□ 2.46
CCNC-219ENST00000627680 SHROOM2Q13796 1616 aa30.39■■■□□ 2.46
CCNC-219ENST00000627680 JPH4Q96JJ6 628 aa30.36■■■□□ 2.45
CCNC-219ENST00000627680 ERCC6L2Q5T890 1561 aa30.34■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms