Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP3S2P59780 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.24□□□□□ -0.13
AP3S2P59780 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP3S2P59780 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP3S2P59780 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
AP3S2P59780 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
AP3S2P59780 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP3S2P59780 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC14.24□□□□□ -0.13
AP3S2P59780 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.24□□□□□ -0.13
AP3S2P59780 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
AP3S2P59780 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
AP3S2P59780 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
AP3S2P59780 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
AP3S2P59780 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.23□□□□□ -0.13
AP3S2P59780 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.23□□□□□ -0.13
AP3S2P59780 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
AP3S2P59780 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
AP3S2P59780 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.23□□□□□ -0.13
AP3S2P59780 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
AP3S2P59780 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AP3S2P59780 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AP3S2P59780 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
AP3S2P59780 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
AP3S2P59780 KLF4P1-201ENST00000412782 1185 ntBASIC14.23□□□□□ -0.13
AP3S2P59780 HLA-F-220ENST00000434407 884 ntBASIC14.23□□□□□ -0.13
AP3S2P59780 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC14.23□□□□□ -0.13
AP3S2P59780 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
AP3S2P59780 ZNF444P1-201ENST00000559497 298 ntBASIC14.23□□□□□ -0.13
AP3S2P59780 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
AP3S2P59780 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.23□□□□□ -0.13
AP3S2P59780 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC14.23□□□□□ -0.13
AP3S2P59780 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC14.23□□□□□ -0.13
AP3S2P59780 AC079602.3-201ENST00000623931 403 ntBASIC14.23□□□□□ -0.13
AP3S2P59780 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC14.23□□□□□ -0.13
AP3S2P59780 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AP3S2P59780 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
AP3S2P59780 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AP3S2P59780 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
AP3S2P59780 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AP3S2P59780 AC069224.1-201ENST00000566372 1715 ntBASIC14.23□□□□□ -0.13
AP3S2P59780 TMBIM7P-203ENST00000641617 1718 ntBASIC14.23□□□□□ -0.13
AP3S2P59780 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
AP3S2P59780 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AP3S2P59780 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
AP3S2P59780 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AP3S2P59780 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC14.23□□□□□ -0.13
AP3S2P59780 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
AP3S2P59780 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.23□□□□□ -0.13
AP3S2P59780 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
AP3S2P59780 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
AP3S2P59780 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AP3S2P59780 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
AP3S2P59780 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
AP3S2P59780 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
AP3S2P59780 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
AP3S2P59780 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
AP3S2P59780 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP3S2P59780 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
AP3S2P59780 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
AP3S2P59780 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP3S2P59780 SSR4P1-203ENST00000599569 2260 ntBASIC14.22□□□□□ -0.13
AP3S2P59780 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
AP3S2P59780 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
AP3S2P59780 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
AP3S2P59780 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP3S2P59780 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP3S2P59780 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP3S2P59780 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
AP3S2P59780 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
AP3S2P59780 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP3S2P59780 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
AP3S2P59780 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP3S2P59780 MIR1238-201ENST00000408483 83 ntBASIC14.22□□□□□ -0.13
AP3S2P59780 AL390955.1-201ENST00000428694 934 ntBASIC14.22□□□□□ -0.13
AP3S2P59780 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
AP3S2P59780 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC14.22□□□□□ -0.13
AP3S2P59780 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC14.22□□□□□ -0.13
AP3S2P59780 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
AP3S2P59780 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC14.22□□□□□ -0.13
AP3S2P59780 GCSHP2-201ENST00000560971 527 ntBASIC14.22□□□□□ -0.13
AP3S2P59780 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC14.22□□□□□ -0.13
AP3S2P59780 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
AP3S2P59780 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.22□□□□□ -0.13
AP3S2P59780 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
AP3S2P59780 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP3S2P59780 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.22□□□□□ -0.13
AP3S2P59780 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP3S2P59780 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.22□□□□□ -0.13
AP3S2P59780 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP3S2P59780 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP3S2P59780 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC14.22□□□□□ -0.13
AP3S2P59780 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
AP3S2P59780 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
AP3S2P59780 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP3S2P59780 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP3S2P59780 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP3S2P59780 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.22□□□□□ -0.13
AP3S2P59780 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.22□□□□□ -0.13
AP3S2P59780 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
AP3S2P59780 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms