RNA–Protein interactions for RNA: ENST00000603838.5

SMAGP-204, Transcript of small cell adhesion glycoprotein, humanhuman

TSL 2 BASIC

Gene SMAGP, Length 816 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAGP-204ENST00000603838 NISCHQ9Y2I1 1504 aa48.05■■■■■ 5.28
SMAGP-204ENST00000603838 CCDC180Q9P1Z9 1646 aa43.04■■■■■ 4.48
SMAGP-204ENST00000603838 ABCC9O60706 1549 aa42.37■■■■■ 4.37
SMAGP-204ENST00000603838 RB1CC1Q8TDY2 1594 aa40.6■■■■■ 4.09
SMAGP-204ENST00000603838 NACADO15069 1562 aa40.44■■■■■ 4.06
SMAGP-204ENST00000603838 MYO15BQ96JP2 1530 aa40.06■■■■■ 4
SMAGP-204ENST00000603838 DCAF8L2P0C7V8 631 aa40.01■■■■■ 4
SMAGP-204ENST00000603838 ZCCHC6Q5VYS8 1495 aaKnown RBP40■■■■□ 3.99
SMAGP-204ENST00000603838 UNC13AQ9UPW8 1703 aa39.91■■■■□ 3.98
SMAGP-204ENST00000603838 DCAF1Q9Y4B6 1507 aa39.75■■■■□ 3.95
SMAGP-204ENST00000603838 BICRAQ9NZM4 1560 aa39.5■■■■□ 3.91
SMAGP-204ENST00000603838 PABPN1Q86U42 306 aaKnown RBP eCLIP39.4■■■■□ 3.9
SMAGP-204ENST00000603838 DNAJC5BQ9UF47 199 aa39.21■■■■□ 3.87
SMAGP-204ENST00000603838 SCRIBQ14160 1630 aa39.19■■■■□ 3.86
SMAGP-204ENST00000603838 SHROOM4Q9ULL8 1493 aa38.94■■■■□ 3.82
SMAGP-204ENST00000603838 EIF4G1Q04637 1599 aaKnown RBP38.43■■■■□ 3.74
SMAGP-204ENST00000603838 CC2D2AQ9P2K1 1620 aa38.38■■■■□ 3.74
SMAGP-204ENST00000603838 CECR2Q9BXF3 1484 aa38.09■■■■□ 3.69
SMAGP-204ENST00000603838 SMARCA4P51532 1647 aa37.46■■■■□ 3.59
SMAGP-204ENST00000603838 BAZ1AQ9NRL2 1556 aaPredicted RBP37.27■■■■□ 3.56
SMAGP-204ENST00000603838 NCAPD3P42695 1498 aa37.26■■■■□ 3.56
SMAGP-204ENST00000603838 ATAD2BQ9ULI0 1458 aa37.26■■■■□ 3.56
SMAGP-204ENST00000603838 SMARCA2P51531 1590 aa37.2■■■■□ 3.55
SMAGP-204ENST00000603838 HMGXB3Q12766 1538 aa37.15■■■■□ 3.54
SMAGP-204ENST00000603838 PEG3Q9GZU2 1588 aa37.09■■■■□ 3.53
SMAGP-204ENST00000603838 MROH2BQ7Z745 1585 aa37.06■■■■□ 3.52
SMAGP-204ENST00000603838 BAZ1BQ9UIG0 1483 aaKnown RBP36.92■■■■□ 3.5
SMAGP-204ENST00000603838 WIZO95785 1651 aa36.69■■■■□ 3.46
SMAGP-204ENST00000603838 NESP48681 1621 aa36.59■■■■□ 3.45
SMAGP-204ENST00000603838 ERCC6Q03468 1493 aa36.49■■■■□ 3.43
SMAGP-204ENST00000603838 LAMC3Q9Y6N6 1575 aa36.43■■■■□ 3.42
SMAGP-204ENST00000603838 RSF1Q96T23 1441 aaPredicted RBP36.41■■■■□ 3.42
SMAGP-204ENST00000603838 CUX2O14529 1486 aa36.31■■■■□ 3.4
SMAGP-204ENST00000603838 KIF21AQ7Z4S6 1674 aa36.27■■■■□ 3.4
SMAGP-204ENST00000603838 THOC2Q8NI27 1593 aaKnown RBP36.24■■■■□ 3.39
SMAGP-204ENST00000603838 TOP2AP11388 1531 aaKnown RBP36.24■■■■□ 3.39
SMAGP-204ENST00000603838 CADPSQ9ULU8 1353 aa36.11■■■■□ 3.37
SMAGP-204ENST00000603838 PDS5BQ9NTI5 1447 aa36.05■■■■□ 3.36
SMAGP-204ENST00000603838 CFTRP13569 1480 aa35.88■■■■□ 3.33
SMAGP-204ENST00000603838 MRC2Q9UBG0 1479 aa35.82■■■■□ 3.32
SMAGP-204ENST00000603838 PRDM2Q13029 1718 aa35.81■■■■□ 3.32
SMAGP-204ENST00000603838 WDR62O43379 1518 aa35.79■■■■□ 3.32
SMAGP-204ENST00000603838 FANCD2Q9BXW9 1451 aa35.77■■■■□ 3.32
SMAGP-204ENST00000603838 CEP164Q9UPV0 1460 aa35.77■■■■□ 3.32
SMAGP-204ENST00000603838 CCDC88BA6NC98 1476 aa35.73■■■■□ 3.31
SMAGP-204ENST00000603838 DNAJC5Q9H3Z4 198 aa35.55■■■■□ 3.28
SMAGP-204ENST00000603838 URB2Q14146 1524 aaKnown RBP35.51■■■■□ 3.27
SMAGP-204ENST00000603838 TOPBP1Q92547 1522 aa35.18■■■■□ 3.22
SMAGP-204ENST00000603838 DNMBPQ6XZF7 1577 aa35.14■■■■□ 3.22
SMAGP-204ENST00000603838 ABCC8Q09428 1581 aa35.04■■■■□ 3.2
SMAGP-204ENST00000603838 IFT140Q96RY7 1462 aa35.01■■■■□ 3.19
SMAGP-204ENST00000603838 SUPT5HO00267 1087 aaKnown RBP34.98■■■■□ 3.19
SMAGP-204ENST00000603838 ZNF608Q9ULD9 1512 aaPredicted RBP34.96■■■■□ 3.19
SMAGP-204ENST00000603838 TARBP1Q13395 1621 aaKnown RBP34.92■■■■□ 3.18
SMAGP-204ENST00000603838 EIF4G3O43432 1585 aaKnown RBP34.9■■■■□ 3.18
SMAGP-204ENST00000603838 POLA1P09884 1462 aaPredicted RBP34.87■■■■□ 3.17
SMAGP-204ENST00000603838 CUX1P39880 1505 aa34.81■■■■□ 3.16
SMAGP-204ENST00000603838 FGD5Q6ZNL6 1462 aa34.71■■■■□ 3.15
SMAGP-204ENST00000603838 RAD54L2Q9Y4B4 1467 aa34.69■■■■□ 3.14
SMAGP-204ENST00000603838 WDR97A6NE52 1622 aa34.63■■■■□ 3.13
SMAGP-204ENST00000603838 AQRO60306 1485 aaKnown RBP eCLIP34.63■■■■□ 3.13
SMAGP-204ENST00000603838 SOGA1O94964 1423 aa34.58■■■■□ 3.13
SMAGP-204ENST00000603838 CHD1O14646 1710 aa34.58■■■■□ 3.13
SMAGP-204ENST00000603838 OSCARQ8IYS5 282 aa34.52■■■■□ 3.12
SMAGP-204ENST00000603838 TDRD9Q8NDG6 1382 aaKnown RBP34.46■■■■□ 3.11
SMAGP-204ENST00000603838 BIVM-ERCC5R4GMW8 1640 aa34.45■■■■□ 3.11
SMAGP-204ENST00000603838 SYNJ1O43426 1573 aa34.41■■■■□ 3.1
SMAGP-204ENST00000603838 PBRM1Q86U86 1689 aa34.4■■■■□ 3.1
SMAGP-204ENST00000603838 TOP2BQ02880 1626 aa34.4■■■■□ 3.1
SMAGP-204ENST00000603838 ABCA5Q8WWZ7 1642 aa34.37■■■■□ 3.09
SMAGP-204ENST00000603838 SNAPC4Q5SXM2 1469 aa34.36■■■■□ 3.09
SMAGP-204ENST00000603838 ABCA10Q8WWZ4 1543 aa34.34■■■■□ 3.09
SMAGP-204ENST00000603838 RIMBP3CA6NJZ7 1639 aa34.32■■■■□ 3.08
SMAGP-204ENST00000603838 RIMBP3BA6NNM3 1639 aa34.32■■■■□ 3.08
SMAGP-204ENST00000603838 RIMBP3Q9UFD9 1639 aa34.32■■■■□ 3.08
SMAGP-204ENST00000603838 WRNQ14191 1432 aaPredicted RBP eCLIP34.31■■■■□ 3.08
SMAGP-204ENST00000603838 GRIN2BQ13224 1484 aa34.29■■■■□ 3.08
SMAGP-204ENST00000603838 MAGI1Q96QZ7 1491 aaPredicted RBP34.27■■■■□ 3.08
SMAGP-204ENST00000603838 GAPVD1Q14C86 1478 aa34.23■■■■□ 3.07
SMAGP-204ENST00000603838 ARHGEF11O15085 1522 aa34.22■■■■□ 3.07
SMAGP-204ENST00000603838 TRIM41Q8WV44 630 aa34.18■■■■□ 3.06
SMAGP-204ENST00000603838 SYNJ2O15056 1496 aa34.14■■■■□ 3.06
SMAGP-204ENST00000603838 CLASP1Q7Z460 1538 aa34.14■■■■□ 3.06
SMAGP-204ENST00000603838 FBLN2P98095 1184 aa34.13■■■■□ 3.05
SMAGP-204ENST00000603838 ADAMTS12P58397 1594 aa34.06■■■■□ 3.04
SMAGP-204ENST00000603838 CHMP7Q8WUX9 453 aaPredicted RBP33.97■■■■□ 3.03
SMAGP-204ENST00000603838 ARAP1Q96P48 1450 aa33.93■■■■□ 3.02
SMAGP-204ENST00000603838 ERICH3Q5RHP9 1530 aa33.93■■■■□ 3.02
SMAGP-204ENST00000603838 GRIN2AQ12879 1464 aa33.9■■■■□ 3.02
SMAGP-204ENST00000603838 CEP170Q5SW79 1584 aa33.83■■■■□ 3.01
SMAGP-204ENST00000603838 FHAD1B1AJZ9 1412 aa33.8■■■■□ 3
SMAGP-204ENST00000603838 NUP160Q12769 1436 aa33.77■■■■□ 3
SMAGP-204ENST00000603838 CYB5RLQ6IPT4 315 aa33.7■■■□□ 2.99
SMAGP-204ENST00000603838 SHROOM2Q13796 1616 aa33.68■■■□□ 2.98
SMAGP-204ENST00000603838 ERCC6L2Q5T890 1561 aa33.64■■■□□ 2.98
SMAGP-204ENST00000603838 CUL7Q14999 1698 aa33.6■■■□□ 2.97
SMAGP-204ENST00000603838 RUSC2Q8N2Y8 1516 aa33.59■■■□□ 2.97
SMAGP-204ENST00000603838 KIF27Q86VH2 1401 aa33.58■■■□□ 2.97
SMAGP-204ENST00000603838 IGF1RP08069 1367 aa33.49■■■□□ 2.95
SMAGP-204ENST00000603838 PRG4Q92954 1404 aaPredicted RBP33.32■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms