RNA–Protein interactions for RNA: ENST00000370470.5

FMR1-203, Transcript of fragile X mental retardation 1, humanhuman

TSL 5 BASIC

Gene FMR1, Length 1,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-203ENST00000370470 NISCHQ9Y2I1 1504 aa31.46■■■□□ 2.63
FMR1-203ENST00000370470 CCDC180Q9P1Z9 1646 aa26.78■■□□□ 1.88
FMR1-203ENST00000370470 ZCCHC6Q5VYS8 1495 aaKnown RBP26.66■■□□□ 1.86
FMR1-203ENST00000370470 SHROOM4Q9ULL8 1493 aa26.42■■□□□ 1.82
FMR1-203ENST00000370470 SUPT5HO00267 1087 aaKnown RBP26.12■■□□□ 1.77
FMR1-203ENST00000370470 DCAF1Q9Y4B6 1507 aa26.09■■□□□ 1.77
FMR1-203ENST00000370470 CHIC1Q5VXU3 224 aa25.73■■□□□ 1.71
FMR1-203ENST00000370470 DCAF8L2P0C7V8 631 aa25.58■■□□□ 1.69
FMR1-203ENST00000370470 MYO15BQ96JP2 1530 aa25.43■■□□□ 1.66
FMR1-203ENST00000370470 HRCP23327 699 aa25.28■■□□□ 1.64
FMR1-203ENST00000370470 ABCC9O60706 1549 aa25.13■■□□□ 1.61
FMR1-203ENST00000370470 PCGF6Q9BYE7 350 aa24.93■■□□□ 1.58
FMR1-203ENST00000370470 RSF1Q96T23 1441 aaPredicted RBP24.9■■□□□ 1.58
FMR1-203ENST00000370470 NACADO15069 1562 aa24.75■■□□□ 1.55
FMR1-203ENST00000370470 RB1CC1Q8TDY2 1594 aa24.74■■□□□ 1.55
FMR1-203ENST00000370470 SCRIBQ14160 1630 aa24.74■■□□□ 1.55
FMR1-203ENST00000370470 LOC105371045A0A1W2PR82 267 aa24.73■■□□□ 1.55
FMR1-203ENST00000370470 TRIM26Q12899 539 aaPredicted RBP24.72■■□□□ 1.55
FMR1-203ENST00000370470 TRIM41Q8WV44 630 aa24.55■■□□□ 1.52
FMR1-203ENST00000370470 ZEB1P37275 1124 aaPredicted RBP24.49■■□□□ 1.51
FMR1-203ENST00000370470 PPARGC1BQ86YN6 1023 aaKnown RBP24.31■■□□□ 1.48
FMR1-203ENST00000370470 CECR2Q9BXF3 1484 aa24.3■■□□□ 1.48
FMR1-203ENST00000370470 MROH2BQ7Z745 1585 aa24.3■■□□□ 1.48
FMR1-203ENST00000370470 BAZ1AQ9NRL2 1556 aaPredicted RBP24.2■■□□□ 1.46
FMR1-203ENST00000370470 WIZO95785 1651 aa24.1■■□□□ 1.45
FMR1-203ENST00000370470 EIF4G1Q04637 1599 aaKnown RBP24.02■■□□□ 1.44
FMR1-203ENST00000370470 FAM9AQ8IZU1 332 aaPredicted RBP24.02■■□□□ 1.44
FMR1-203ENST00000370470 TOP2AP11388 1531 aaKnown RBP23.96■■□□□ 1.43
FMR1-203ENST00000370470 SMARCA4P51532 1647 aa23.85■■□□□ 1.41
FMR1-203ENST00000370470 EEA1Q15075 1411 aa23.81■■□□□ 1.4
FMR1-203ENST00000370470 WRNQ14191 1432 aaPredicted RBP eCLIP23.81■■□□□ 1.4
FMR1-203ENST00000370470 CCDC88BA6NC98 1476 aa23.78■■□□□ 1.4
FMR1-203ENST00000370470 SMARCA2P51531 1590 aa23.75■■□□□ 1.39
FMR1-203ENST00000370470 TNIKQ9UKE5 1360 aa23.68■■□□□ 1.38
FMR1-203ENST00000370470 PEG3Q9GZU2 1588 aa23.6■■□□□ 1.37
FMR1-203ENST00000370470 UNC13AQ9UPW8 1703 aa23.57■■□□□ 1.36
FMR1-203ENST00000370470 ABCC8Q09428 1581 aa23.55■■□□□ 1.36
FMR1-203ENST00000370470 CEP162Q5TB80 1403 aa23.55■■□□□ 1.36
FMR1-203ENST00000370470 CSRNP3Q8WYN3 585 aa23.55■■□□□ 1.36
FMR1-203ENST00000370470 EHMT2Q96KQ7 1210 aa23.54■■□□□ 1.36
FMR1-203ENST00000370470 PELP1Q8IZL8 1130 aaKnown RBP23.48■■□□□ 1.35
FMR1-203ENST00000370470 CCER1Q8TC90 406 aaPredicted RBP23.47■■□□□ 1.35
FMR1-203ENST00000370470 SOGA1O94964 1423 aa23.46■■□□□ 1.35
FMR1-203ENST00000370470 GOLGA3Q08378 1498 aa23.44■■□□□ 1.34
FMR1-203ENST00000370470 BICRAQ9NZM4 1560 aa23.4■■□□□ 1.34
FMR1-203ENST00000370470 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.37■■□□□ 1.33
FMR1-203ENST00000370470 CEP164Q9UPV0 1460 aa23.32■■□□□ 1.32
FMR1-203ENST00000370470 KIF21BO75037 1637 aa23.3■■□□□ 1.32
FMR1-203ENST00000370470 UBTFP17480 764 aaKnown RBP23.29■■□□□ 1.32
FMR1-203ENST00000370470 RUSC2Q8N2Y8 1516 aa23.26■■□□□ 1.31
FMR1-203ENST00000370470 BAZ1BQ9UIG0 1483 aaKnown RBP23.25■■□□□ 1.31
FMR1-203ENST00000370470 ATAD2BQ9ULI0 1458 aa23.24■■□□□ 1.31
FMR1-203ENST00000370470 SCAF1Q9H7N4 1312 aaKnown RBP23.21■■□□□ 1.31
FMR1-203ENST00000370470 DIEXFQ68CQ4 756 aaKnown RBP23.16■■□□□ 1.3
FMR1-203ENST00000370470 PABPN1Q86U42 306 aaKnown RBP eCLIP23.14■■□□□ 1.3
FMR1-203ENST00000370470 SYNJ1O43426 1573 aa23.14■■□□□ 1.29
FMR1-203ENST00000370470 ACIN1Q9UKV3 1341 aaKnown RBP23.13■■□□□ 1.29
FMR1-203ENST00000370470 CLIP1P30622 1438 aa23.11■■□□□ 1.29
FMR1-203ENST00000370470 CENPBP07199 599 aaPredicted RBP23.1■■□□□ 1.29
FMR1-203ENST00000370470 VPS8Q8N3P4 1428 aa23.1■■□□□ 1.29
FMR1-203ENST00000370470 ZNF316A6NFI3 1004 aaPredicted RBP23.04■■□□□ 1.28
FMR1-203ENST00000370470 TOP2BQ02880 1626 aa23.01■■□□□ 1.27
FMR1-203ENST00000370470 APLP2Q06481 763 aa22.99■■□□□ 1.27
FMR1-203ENST00000370470 ERICH3Q5RHP9 1530 aa22.96■■□□□ 1.27
FMR1-203ENST00000370470 CLSPNQ9HAW4 1339 aa22.94■■□□□ 1.26
FMR1-203ENST00000370470 BIVM-ERCC5R4GMW8 1640 aa22.93■■□□□ 1.26
FMR1-203ENST00000370470 RAPGEF2Q9Y4G8 1499 aa22.92■■□□□ 1.26
FMR1-203ENST00000370470 NEUROD1Q13562 356 aa22.91■■□□□ 1.26
FMR1-203ENST00000370470 NCAPD3P42695 1498 aa22.89■■□□□ 1.26
FMR1-203ENST00000370470 HMGXB3Q12766 1538 aa22.88■■□□□ 1.25
FMR1-203ENST00000370470 PRXQ9BXM0 1461 aa22.88■■□□□ 1.25
FMR1-203ENST00000370470 TTBK1Q5TCY1 1321 aaPredicted RBP22.88■■□□□ 1.25
FMR1-203ENST00000370470 HNRNPUL2Q1KMD3 747 aaKnown RBP22.76■■□□□ 1.23
FMR1-203ENST00000370470 KIF27Q86VH2 1401 aa22.74■■□□□ 1.23
FMR1-203ENST00000370470 GTF3C3Q9Y5Q9 886 aa22.72■■□□□ 1.23
FMR1-203ENST00000370470 CFTRP13569 1480 aa22.69■■□□□ 1.22
FMR1-203ENST00000370470 ARAP1Q96P48 1450 aa22.67■■□□□ 1.22
FMR1-203ENST00000370470 RRBP1Q9P2E9 1410 aaKnown RBP22.64■■□□□ 1.22
FMR1-203ENST00000370470 CUX1P39880 1505 aa22.63■■□□□ 1.21
FMR1-203ENST00000370470 CUX2O14529 1486 aa22.61■■□□□ 1.21
FMR1-203ENST00000370470 DHX57Q6P158 1386 aaKnown RBP22.57■■□□□ 1.2
FMR1-203ENST00000370470 MAP3K1Q13233 1512 aa22.56■■□□□ 1.2
FMR1-203ENST00000370470 MIER1Q8N108 512 aa22.55■■□□□ 1.2
FMR1-203ENST00000370470 ARHGAP35Q9NRY4 1499 aa22.47■■□□□ 1.19
FMR1-203ENST00000370470 MYT1Q01538 1121 aa22.47■■□□□ 1.19
FMR1-203ENST00000370470 KANK4Q5T7N3 995 aaPredicted RBP22.46■■□□□ 1.19
FMR1-203ENST00000370470 CCNB3Q8WWL7 1395 aa22.46■■□□□ 1.19
FMR1-203ENST00000370470 PRDM2Q13029 1718 aa22.44■■□□□ 1.18
FMR1-203ENST00000370470 IGF1RP08069 1367 aa22.43■■□□□ 1.18
FMR1-203ENST00000370470 RANGAP1P46060 587 aaPredicted RBP22.41■■□□□ 1.18
FMR1-203ENST00000370470 CADPSQ9ULU8 1353 aa22.39■■□□□ 1.17
FMR1-203ENST00000370470 CARMIL1Q5VZK9 1371 aa22.32■■□□□ 1.16
FMR1-203ENST00000370470 FHAD1B1AJZ9 1412 aa22.31■■□□□ 1.16
FMR1-203ENST00000370470 YTHDC1Q96MU7 727 aaKnown RBP22.3■■□□□ 1.16
FMR1-203ENST00000370470 TIMELESSQ9UNS1 1208 aa22.29■■□□□ 1.16
FMR1-203ENST00000370470 TIAM1Q13009 1591 aa22.29■■□□□ 1.16
FMR1-203ENST00000370470 LRRC9Q6ZRR7 1453 aa22.23■■□□□ 1.15
FMR1-203ENST00000370470 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.23■■□□□ 1.15
FMR1-203ENST00000370470 SETD5Q9C0A6 1442 aa22.21■■□□□ 1.15
FMR1-203ENST00000370470 FGD5Q6ZNL6 1462 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms