RNA–Protein interactions for RNA: ENST00000378391.6

PRDM16-203, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRDM16, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-203ENST00000378391 NISCHQ9Y2I1 1504 aa25.5■■□□□ 1.67
PRDM16-203ENST00000378391 DCAF8L2P0C7V8 631 aa24.34■■□□□ 1.49
PRDM16-203ENST00000378391 MYT1Q01538 1121 aa23.63■■□□□ 1.37
PRDM16-203ENST00000378391 SUPT5HO00267 1087 aaKnown RBP23.58■■□□□ 1.37
PRDM16-203ENST00000378391 SHROOM4Q9ULL8 1493 aa23.49■■□□□ 1.35
PRDM16-203ENST00000378391 PELP1Q8IZL8 1130 aaKnown RBP23.3■■□□□ 1.32
PRDM16-203ENST00000378391 PCGF6Q9BYE7 350 aa22.8■■□□□ 1.24
PRDM16-203ENST00000378391 EHMT2Q96KQ7 1210 aa22.61■■□□□ 1.21
PRDM16-203ENST00000378391 HRCP23327 699 aa22.56■■□□□ 1.2
PRDM16-203ENST00000378391 ERICH6Q7L0X2 663 aa22.46■■□□□ 1.19
PRDM16-203ENST00000378391 APLP2Q06481 763 aa22.42■■□□□ 1.18
PRDM16-203ENST00000378391 TTBK1Q5TCY1 1321 aaPredicted RBP22.38■■□□□ 1.17
PRDM16-203ENST00000378391 ZEB1P37275 1124 aaPredicted RBP22.23■■□□□ 1.15
PRDM16-203ENST00000378391 CHIC1Q5VXU3 224 aa22.22■■□□□ 1.15
PRDM16-203ENST00000378391 FAM9AQ8IZU1 332 aaPredicted RBP22.19■■□□□ 1.14
PRDM16-203ENST00000378391 CENPBP07199 599 aaPredicted RBP22.17■■□□□ 1.14
PRDM16-203ENST00000378391 PPARGC1BQ86YN6 1023 aaKnown RBP22.13■■□□□ 1.13
PRDM16-203ENST00000378391 CCER1Q8TC90 406 aaPredicted RBP22.07■■□□□ 1.12
PRDM16-203ENST00000378391 TRIM26Q12899 539 aaPredicted RBP21.97■■□□□ 1.11
PRDM16-203ENST00000378391 LOC105371045A0A1W2PR82 267 aa21.93■■□□□ 1.1
PRDM16-203ENST00000378391 TRIM41Q8WV44 630 aa21.88■■□□□ 1.09
PRDM16-203ENST00000378391 YTHDC1Q96MU7 727 aaKnown RBP21.56■■□□□ 1.04
PRDM16-203ENST00000378391 MYO15BQ96JP2 1530 aa21.56■■□□□ 1.04
PRDM16-203ENST00000378391 RANGAP1P46060 587 aaPredicted RBP21.55■■□□□ 1.04
PRDM16-203ENST00000378391 UBTFP17480 764 aaKnown RBP21.55■■□□□ 1.04
PRDM16-203ENST00000378391 NEFLP07196 543 aa21.54■■□□□ 1.04
PRDM16-203ENST00000378391 ZCCHC6Q5VYS8 1495 aaKnown RBP21.46■■□□□ 1.03
PRDM16-203ENST00000378391 DCAF1Q9Y4B6 1507 aa21.43■■□□□ 1.02
PRDM16-203ENST00000378391 ATP1B4Q9UN42 357 aaPredicted RBP21.37■■□□□ 1.01
PRDM16-203ENST00000378391 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.18■□□□□ 0.98
PRDM16-203ENST00000378391 DIEXFQ68CQ4 756 aaKnown RBP21.09■□□□□ 0.97
PRDM16-203ENST00000378391 CCDC180Q9P1Z9 1646 aa21.03■□□□□ 0.96
PRDM16-203ENST00000378391 SCAF1Q9H7N4 1312 aaKnown RBP21■□□□□ 0.95
PRDM16-203ENST00000378391 GTF3C3Q9Y5Q9 886 aa20.99■□□□□ 0.95
PRDM16-203ENST00000378391 ACIN1Q9UKV3 1341 aaKnown RBP20.97■□□□□ 0.95
PRDM16-203ENST00000378391 HNRNPUL2Q1KMD3 747 aaKnown RBP20.85■□□□□ 0.93
PRDM16-203ENST00000378391 ITGAEP38570 1179 aa20.83■□□□□ 0.93
PRDM16-203ENST00000378391 DAXXQ9UER7 740 aaPredicted RBP20.83■□□□□ 0.92
PRDM16-203ENST00000378391 RTL5Q5HYW3 569 aaPredicted RBP20.81■□□□□ 0.92
PRDM16-203ENST00000378391 GLIPR1L2Q4G1C9 344 aa20.77■□□□□ 0.92
PRDM16-203ENST00000378391 NEUROD1Q13562 356 aa20.74■□□□□ 0.91
PRDM16-203ENST00000378391 ZNF316A6NFI3 1004 aaPredicted RBP20.66■□□□□ 0.9
PRDM16-203ENST00000378391 POLR3GLQ9BT43 218 aa20.65■□□□□ 0.9
PRDM16-203ENST00000378391 EIF5BO60841 1220 aaKnown RBP20.64■□□□□ 0.89
PRDM16-203ENST00000378391 SCRIBQ14160 1630 aa20.62■□□□□ 0.89
PRDM16-203ENST00000378391 RSF1Q96T23 1441 aaPredicted RBP20.52■□□□□ 0.87
PRDM16-203ENST00000378391 CNGB1Q14028 1251 aaPredicted RBP20.43■□□□□ 0.86
PRDM16-203ENST00000378391 MYT1LQ9UL68 1186 aa20.36■□□□□ 0.85
PRDM16-203ENST00000378391 ABCC9O60706 1549 aa20.34■□□□□ 0.85
PRDM16-203ENST00000378391 FAM50AQ14320 339 aaKnown RBP20.32■□□□□ 0.84
PRDM16-203ENST00000378391 CSRNP3Q8WYN3 585 aa20.32■□□□□ 0.84
PRDM16-203ENST00000378391 CLSPNQ9HAW4 1339 aa20.3■□□□□ 0.84
PRDM16-203ENST00000378391 RB1CC1Q8TDY2 1594 aa20.28■□□□□ 0.84
PRDM16-203ENST00000378391 ANP32CO43423 234 aa20.26■□□□□ 0.83
PRDM16-203ENST00000378391 MIER1Q8N108 512 aa20.24■□□□□ 0.83
PRDM16-203ENST00000378391 BCANQ96GW7 911 aa20.24■□□□□ 0.83
PRDM16-203ENST00000378391 CDK11AQ9UQ88 783 aaPredicted RBP20.23■□□□□ 0.83
PRDM16-203ENST00000378391 TRIM52Q96A61 297 aa20.2■□□□□ 0.82
PRDM16-203ENST00000378391 CEP162Q5TB80 1403 aa20.15■□□□□ 0.82
PRDM16-203ENST00000378391 SLC4A1APQ9BWU0 796 aaKnown RBP20.12■□□□□ 0.81
PRDM16-203ENST00000378391 CECR2Q9BXF3 1484 aa19.99■□□□□ 0.79
PRDM16-203ENST00000378391 TNIKQ9UKE5 1360 aa19.98■□□□□ 0.79
PRDM16-203ENST00000378391 PABPN1Q86U42 306 aaKnown RBP eCLIP19.97■□□□□ 0.79
PRDM16-203ENST00000378391 ZNF326Q5BKZ1 582 aaKnown RBP19.93■□□□□ 0.78
PRDM16-203ENST00000378391 GOLGA3Q08378 1498 aa19.93■□□□□ 0.78
PRDM16-203ENST00000378391 EEA1Q15075 1411 aa19.92■□□□□ 0.78
PRDM16-203ENST00000378391 CLIP1P30622 1438 aa19.89■□□□□ 0.78
PRDM16-203ENST00000378391 ANP32AP39687 249 aaKnown RBP19.89■□□□□ 0.77
PRDM16-203ENST00000378391 MROH2BQ7Z745 1585 aa19.87■□□□□ 0.77
PRDM16-203ENST00000378391 FKBP8Q14318 412 aa19.87■□□□□ 0.77
PRDM16-203ENST00000378391 ZBTB47Q9UFB7 747 aaPredicted RBP19.83■□□□□ 0.76
PRDM16-203ENST00000378391 SOGA1O94964 1423 aa19.82■□□□□ 0.76
PRDM16-203ENST00000378391 NACADO15069 1562 aa19.8■□□□□ 0.76
PRDM16-203ENST00000378391 ABCC8Q09428 1581 aa19.78■□□□□ 0.76
PRDM16-203ENST00000378391 SUPT16HQ9Y5B9 1047 aaKnown RBP19.77■□□□□ 0.76
PRDM16-203ENST00000378391 SLC24A1O60721 1099 aa19.77■□□□□ 0.76
PRDM16-203ENST00000378391 CANXP27824 592 aaKnown RBP19.76■□□□□ 0.75
PRDM16-203ENST00000378391 CCDC88BA6NC98 1476 aa19.75■□□□□ 0.75
PRDM16-203ENST00000378391 WIZO95785 1651 aa19.75■□□□□ 0.75
PRDM16-203ENST00000378391 DDX10Q13206 875 aaKnown RBP19.74■□□□□ 0.75
PRDM16-203ENST00000378391 BAZ1AQ9NRL2 1556 aaPredicted RBP19.74■□□□□ 0.75
PRDM16-203ENST00000378391 WRNQ14191 1432 aaPredicted RBP eCLIP19.72■□□□□ 0.75
PRDM16-203ENST00000378391 CEP164Q9UPV0 1460 aa19.71■□□□□ 0.75
PRDM16-203ENST00000378391 ANP32EQ9BTT0 268 aa19.7■□□□□ 0.74
PRDM16-203ENST00000378391 P3H3Q8IVL6 736 aa19.67■□□□□ 0.74
PRDM16-203ENST00000378391 TONSLQ96HA7 1378 aa19.67■□□□□ 0.74
PRDM16-203ENST00000378391 HNRNPUQ00839 825 aaKnown RBP eCLIP19.65■□□□□ 0.74
PRDM16-203ENST00000378391 TNNT2P45379 298 aaPredicted RBP19.64■□□□□ 0.73
PRDM16-203ENST00000378391 NPM2Q86SE8 214 aaKnown RBP19.64■□□□□ 0.73
PRDM16-203ENST00000378391 NEFMP07197 916 aa19.62■□□□□ 0.73
PRDM16-203ENST00000378391 BCL11AQ9H165 835 aa19.58■□□□□ 0.72
PRDM16-203ENST00000378391 CDK11BP21127 795 aaKnown RBP19.58■□□□□ 0.72
PRDM16-203ENST00000378391 VPS8Q8N3P4 1428 aa19.55■□□□□ 0.72
PRDM16-203ENST00000378391 FBLN2P98095 1184 aa19.53■□□□□ 0.72
PRDM16-203ENST00000378391 FAM9BQ8IZU0 186 aa19.52■□□□□ 0.71
PRDM16-203ENST00000378391 HIRIP3Q9BW71 556 aaPredicted RBP19.51■□□□□ 0.71
PRDM16-203ENST00000378391 TOP2AP11388 1531 aaKnown RBP19.5■□□□□ 0.71
PRDM16-203ENST00000378391 ZNF777Q9ULD5 760 aaPredicted RBP19.48■□□□□ 0.71
PRDM16-203ENST00000378391 ARID3CA6NKF2 412 aa19.48■□□□□ 0.71
PRDM16-203ENST00000378391 ANP32BQ92688 251 aaKnown RBP19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms