RNA–Protein interactions for RNA: ENST00000607942.5

CCDC116-203, Transcript of coiled-coil domain containing 116, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC116, Length 1,913 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116-203ENST00000607942 NISCHQ9Y2I1 1504 aa36.86■■■■□ 3.49
CCDC116-203ENST00000607942 CCDC180Q9P1Z9 1646 aa31.97■■■□□ 2.71
CCDC116-203ENST00000607942 ZCCHC6Q5VYS8 1495 aaKnown RBP30.97■■■□□ 2.55
CCDC116-203ENST00000607942 DCAF8L2P0C7V8 631 aa30.62■■■□□ 2.49
CCDC116-203ENST00000607942 SHROOM4Q9ULL8 1493 aa30.4■■■□□ 2.46
CCDC116-203ENST00000607942 DCAF1Q9Y4B6 1507 aa30.37■■■□□ 2.45
CCDC116-203ENST00000607942 ABCC9O60706 1549 aa30.31■■■□□ 2.44
CCDC116-203ENST00000607942 MYO15BQ96JP2 1530 aa29.92■■■□□ 2.38
CCDC116-203ENST00000607942 NACADO15069 1562 aa29.77■■■□□ 2.36
CCDC116-203ENST00000607942 SCRIBQ14160 1630 aa29.6■■■□□ 2.33
CCDC116-203ENST00000607942 RB1CC1Q8TDY2 1594 aa29.51■■■□□ 2.31
CCDC116-203ENST00000607942 SUPT5HO00267 1087 aaKnown RBP29.32■■■□□ 2.28
CCDC116-203ENST00000607942 UNC13AQ9UPW8 1703 aa28.95■■■□□ 2.23
CCDC116-203ENST00000607942 CECR2Q9BXF3 1484 aa28.72■■■□□ 2.19
CCDC116-203ENST00000607942 RSF1Q96T23 1441 aaPredicted RBP28.7■■■□□ 2.19
CCDC116-203ENST00000607942 PABPN1Q86U42 306 aaKnown RBP eCLIP28.69■■■□□ 2.18
CCDC116-203ENST00000607942 BICRAQ9NZM4 1560 aa28.67■■■□□ 2.18
CCDC116-203ENST00000607942 MROH2BQ7Z745 1585 aa28.55■■■□□ 2.16
CCDC116-203ENST00000607942 BAZ1AQ9NRL2 1556 aaPredicted RBP28.42■■■□□ 2.14
CCDC116-203ENST00000607942 WIZO95785 1651 aa28.32■■■□□ 2.12
CCDC116-203ENST00000607942 SMARCA4P51532 1647 aa28.3■■■□□ 2.12
CCDC116-203ENST00000607942 CHIC1Q5VXU3 224 aa28.07■■■□□ 2.08
CCDC116-203ENST00000607942 TOP2AP11388 1531 aaKnown RBP27.96■■■□□ 2.07
CCDC116-203ENST00000607942 PEG3Q9GZU2 1588 aa27.87■■■□□ 2.05
CCDC116-203ENST00000607942 ATAD2BQ9ULI0 1458 aa27.82■■■□□ 2.04
CCDC116-203ENST00000607942 EIF4G1Q04637 1599 aaKnown RBP27.78■■■□□ 2.04
CCDC116-203ENST00000607942 SMARCA2P51531 1590 aa27.75■■■□□ 2.03
CCDC116-203ENST00000607942 CCDC88BA6NC98 1476 aa27.74■■■□□ 2.03
CCDC116-203ENST00000607942 BAZ1BQ9UIG0 1483 aaKnown RBP27.68■■■□□ 2.02
CCDC116-203ENST00000607942 NCAPD3P42695 1498 aa27.51■■□□□ 1.99
CCDC116-203ENST00000607942 TRIM41Q8WV44 630 aa27.47■■□□□ 1.99
CCDC116-203ENST00000607942 HMGXB3Q12766 1538 aa27.45■■□□□ 1.98
CCDC116-203ENST00000607942 CC2D2AQ9P2K1 1620 aa27.36■■□□□ 1.97
CCDC116-203ENST00000607942 ABCC8Q09428 1581 aa27.25■■□□□ 1.95
CCDC116-203ENST00000607942 LOC105371045A0A1W2PR82 267 aa27.1■■□□□ 1.93
CCDC116-203ENST00000607942 FAM9AQ8IZU1 332 aaPredicted RBP27.1■■□□□ 1.93
CCDC116-203ENST00000607942 WRNQ14191 1432 aaPredicted RBP eCLIP27■■□□□ 1.91
CCDC116-203ENST00000607942 CFTRP13569 1480 aa26.95■■□□□ 1.91
CCDC116-203ENST00000607942 SYNJ1O43426 1573 aa26.9■■□□□ 1.9
CCDC116-203ENST00000607942 CADPSQ9ULU8 1353 aa26.86■■□□□ 1.89
CCDC116-203ENST00000607942 EHMT2Q96KQ7 1210 aa26.8■■□□□ 1.88
CCDC116-203ENST00000607942 DNAJC5BQ9UF47 199 aa26.8■■□□□ 1.88
CCDC116-203ENST00000607942 SOGA1O94964 1423 aa26.78■■□□□ 1.88
CCDC116-203ENST00000607942 PRDM2Q13029 1718 aa26.75■■□□□ 1.87
CCDC116-203ENST00000607942 TOP2BQ02880 1626 aa26.72■■□□□ 1.87
CCDC116-203ENST00000607942 RUSC2Q8N2Y8 1516 aa26.7■■□□□ 1.86
CCDC116-203ENST00000607942 CUX1P39880 1505 aa26.67■■□□□ 1.86
CCDC116-203ENST00000607942 BIVM-ERCC5R4GMW8 1640 aa26.67■■□□□ 1.86
CCDC116-203ENST00000607942 NESP48681 1621 aa26.66■■□□□ 1.86
CCDC116-203ENST00000607942 EEA1Q15075 1411 aa26.61■■□□□ 1.85
CCDC116-203ENST00000607942 FANCD2Q9BXW9 1451 aa26.58■■□□□ 1.85
CCDC116-203ENST00000607942 CSRNP3Q8WYN3 585 aa26.57■■□□□ 1.84
CCDC116-203ENST00000607942 LAMC3Q9Y6N6 1575 aa26.52■■□□□ 1.84
CCDC116-203ENST00000607942 CEP164Q9UPV0 1460 aa26.38■■□□□ 1.81
CCDC116-203ENST00000607942 PDS5BQ9NTI5 1447 aa26.36■■□□□ 1.81
CCDC116-203ENST00000607942 FGD5Q6ZNL6 1462 aa26.35■■□□□ 1.81
CCDC116-203ENST00000607942 DNMBPQ6XZF7 1577 aa26.33■■□□□ 1.8
CCDC116-203ENST00000607942 GOLGA3Q08378 1498 aa26.32■■□□□ 1.8
CCDC116-203ENST00000607942 UBTFP17480 764 aaKnown RBP26.31■■□□□ 1.8
CCDC116-203ENST00000607942 TOPBP1Q92547 1522 aa26.3■■□□□ 1.8
CCDC116-203ENST00000607942 KIF27Q86VH2 1401 aa26.29■■□□□ 1.8
CCDC116-203ENST00000607942 KIF21BO75037 1637 aa26.28■■□□□ 1.8
CCDC116-203ENST00000607942 TNIKQ9UKE5 1360 aa26.27■■□□□ 1.8
CCDC116-203ENST00000607942 KIF21AQ7Z4S6 1674 aa26.27■■□□□ 1.8
CCDC116-203ENST00000607942 URB2Q14146 1524 aaKnown RBP26.26■■□□□ 1.79
CCDC116-203ENST00000607942 CUX2O14529 1486 aa26.23■■□□□ 1.79
CCDC116-203ENST00000607942 RAPGEF2Q9Y4G8 1499 aa26.2■■□□□ 1.78
CCDC116-203ENST00000607942 POLA1P09884 1462 aaPredicted RBP26.19■■□□□ 1.78
CCDC116-203ENST00000607942 RAD54L2Q9Y4B4 1467 aa26.18■■□□□ 1.78
CCDC116-203ENST00000607942 CEP162Q5TB80 1403 aa26.18■■□□□ 1.78
CCDC116-203ENST00000607942 PRXQ9BXM0 1461 aa26.14■■□□□ 1.77
CCDC116-203ENST00000607942 IGF1RP08069 1367 aa26.08■■□□□ 1.77
CCDC116-203ENST00000607942 ABCA10Q8WWZ4 1543 aa26.07■■□□□ 1.76
CCDC116-203ENST00000607942 ERICH3Q5RHP9 1530 aa26.06■■□□□ 1.76
CCDC116-203ENST00000607942 MRC2Q9UBG0 1479 aa26.03■■□□□ 1.76
CCDC116-203ENST00000607942 PCGF6Q9BYE7 350 aa25.98■■□□□ 1.75
CCDC116-203ENST00000607942 RANGAP1P46060 587 aaPredicted RBP25.96■■□□□ 1.75
CCDC116-203ENST00000607942 CARMIL1Q5VZK9 1371 aa25.95■■□□□ 1.74
CCDC116-203ENST00000607942 WDR97A6NE52 1622 aa25.95■■□□□ 1.74
CCDC116-203ENST00000607942 CLIP1P30622 1438 aa25.94■■□□□ 1.74
CCDC116-203ENST00000607942 ERCC6Q03468 1493 aa25.93■■□□□ 1.74
CCDC116-203ENST00000607942 TDRD9Q8NDG6 1382 aaKnown RBP25.92■■□□□ 1.74
CCDC116-203ENST00000607942 PPARGC1BQ86YN6 1023 aaKnown RBP25.89■■□□□ 1.74
CCDC116-203ENST00000607942 TARBP1Q13395 1621 aaKnown RBP25.87■■□□□ 1.73
CCDC116-203ENST00000607942 TRIM26Q12899 539 aaPredicted RBP25.85■■□□□ 1.73
CCDC116-203ENST00000607942 WDR62O43379 1518 aa25.85■■□□□ 1.73
CCDC116-203ENST00000607942 ABCA5Q8WWZ7 1642 aa25.84■■□□□ 1.73
CCDC116-203ENST00000607942 GAPVD1Q14C86 1478 aa25.83■■□□□ 1.72
CCDC116-203ENST00000607942 CUL7Q14999 1698 aa25.76■■□□□ 1.71
CCDC116-203ENST00000607942 THOC2Q8NI27 1593 aaKnown RBP25.76■■□□□ 1.71
CCDC116-203ENST00000607942 AQRO60306 1485 aaKnown RBP eCLIP25.72■■□□□ 1.71
CCDC116-203ENST00000607942 IFT140Q96RY7 1462 aa25.72■■□□□ 1.71
CCDC116-203ENST00000607942 VPS8Q8N3P4 1428 aa25.7■■□□□ 1.7
CCDC116-203ENST00000607942 ARAP1Q96P48 1450 aa25.67■■□□□ 1.7
CCDC116-203ENST00000607942 ZNF608Q9ULD9 1512 aaPredicted RBP25.67■■□□□ 1.7
CCDC116-203ENST00000607942 TTBK1Q5TCY1 1321 aaPredicted RBP25.66■■□□□ 1.7
CCDC116-203ENST00000607942 PBRM1Q86U86 1689 aa25.64■■□□□ 1.69
CCDC116-203ENST00000607942 ARHGAP35Q9NRY4 1499 aa25.63■■□□□ 1.69
CCDC116-203ENST00000607942 GRIN2BQ13224 1484 aa25.57■■□□□ 1.68
CCDC116-203ENST00000607942 FHAD1B1AJZ9 1412 aa25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 233.2 ms