RNA–Protein interactions for RNA: ENST00000393883.6

ZNF559-202, Transcript of zinc finger protein 559, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF559, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF559-202ENST00000393883 DCAF8L2P0C7V8 631 aa25.68■■□□□ 1.7
ZNF559-202ENST00000393883 NISCHQ9Y2I1 1504 aa24.58■■□□□ 1.53
ZNF559-202ENST00000393883 SUPT5HO00267 1087 aaKnown RBP23.87■■□□□ 1.41
ZNF559-202ENST00000393883 FAM9AQ8IZU1 332 aaPredicted RBP23.47■■□□□ 1.35
ZNF559-202ENST00000393883 SHROOM4Q9ULL8 1493 aa23.44■■□□□ 1.34
ZNF559-202ENST00000393883 APLP2Q06481 763 aa23.22■■□□□ 1.31
ZNF559-202ENST00000393883 EHMT2Q96KQ7 1210 aa22.85■■□□□ 1.25
ZNF559-202ENST00000393883 PELP1Q8IZL8 1130 aaKnown RBP22.64■■□□□ 1.21
ZNF559-202ENST00000393883 TRIM41Q8WV44 630 aa22.36■■□□□ 1.17
ZNF559-202ENST00000393883 ATP1B4Q9UN42 357 aaPredicted RBP22.28■■□□□ 1.16
ZNF559-202ENST00000393883 RANGAP1P46060 587 aaPredicted RBP22.18■■□□□ 1.14
ZNF559-202ENST00000393883 UBTFP17480 764 aaKnown RBP22.16■■□□□ 1.14
ZNF559-202ENST00000393883 TTBK1Q5TCY1 1321 aaPredicted RBP22.06■■□□□ 1.12
ZNF559-202ENST00000393883 ZEB1P37275 1124 aaPredicted RBP21.93■■□□□ 1.1
ZNF559-202ENST00000393883 PCGF6Q9BYE7 350 aa21.88■■□□□ 1.09
ZNF559-202ENST00000393883 CCER1Q8TC90 406 aaPredicted RBP21.78■■□□□ 1.08
ZNF559-202ENST00000393883 MYT1LQ9UL68 1186 aa21.76■■□□□ 1.07
ZNF559-202ENST00000393883 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.72■■□□□ 1.07
ZNF559-202ENST00000393883 HNRNPUL2Q1KMD3 747 aaKnown RBP21.72■■□□□ 1.07
ZNF559-202ENST00000393883 MYT1Q01538 1121 aa21.72■■□□□ 1.07
ZNF559-202ENST00000393883 CENPBP07199 599 aaPredicted RBP21.62■■□□□ 1.05
ZNF559-202ENST00000393883 ABCC9O60706 1549 aa21.5■■□□□ 1.03
ZNF559-202ENST00000393883 NEFLP07196 543 aa21.41■■□□□ 1.02
ZNF559-202ENST00000393883 ERICH6Q7L0X2 663 aa21.4■■□□□ 1.02
ZNF559-202ENST00000393883 PABPN1Q86U42 306 aaKnown RBP eCLIP21.31■■□□□ 1
ZNF559-202ENST00000393883 ITGAEP38570 1179 aa21.21■□□□□ 0.99
ZNF559-202ENST00000393883 TRIM26Q12899 539 aaPredicted RBP21.17■□□□□ 0.98
ZNF559-202ENST00000393883 POLR3GLQ9BT43 218 aa21.08■□□□□ 0.96
ZNF559-202ENST00000393883 PPARGC1BQ86YN6 1023 aaKnown RBP21.07■□□□□ 0.96
ZNF559-202ENST00000393883 CHIC1Q5VXU3 224 aa21■□□□□ 0.95
ZNF559-202ENST00000393883 FBLN2P98095 1184 aa20.97■□□□□ 0.95
ZNF559-202ENST00000393883 HRCP23327 699 aa20.95■□□□□ 0.94
ZNF559-202ENST00000393883 SLC4A1APQ9BWU0 796 aaKnown RBP20.94■□□□□ 0.94
ZNF559-202ENST00000393883 FAM50AQ14320 339 aaKnown RBP20.87■□□□□ 0.93
ZNF559-202ENST00000393883 YTHDC1Q96MU7 727 aaKnown RBP20.85■□□□□ 0.93
ZNF559-202ENST00000393883 TRIM52Q96A61 297 aa20.83■□□□□ 0.93
ZNF559-202ENST00000393883 DAXXQ9UER7 740 aaPredicted RBP20.83■□□□□ 0.92
ZNF559-202ENST00000393883 LOC105371045A0A1W2PR82 267 aa20.76■□□□□ 0.91
ZNF559-202ENST00000393883 CDK11AQ9UQ88 783 aaPredicted RBP20.73■□□□□ 0.91
ZNF559-202ENST00000393883 NPM1P06748 294 aaKnown RBP eCLIP20.65■□□□□ 0.9
ZNF559-202ENST00000393883 ESF1Q9H501 851 aaKnown RBP20.64■□□□□ 0.89
ZNF559-202ENST00000393883 CNGB1Q14028 1251 aaPredicted RBP20.58■□□□□ 0.88
ZNF559-202ENST00000393883 BCANQ96GW7 911 aa20.56■□□□□ 0.88
ZNF559-202ENST00000393883 SCRIBQ14160 1630 aa20.52■□□□□ 0.88
ZNF559-202ENST00000393883 CSRNP3Q8WYN3 585 aa20.5■□□□□ 0.87
ZNF559-202ENST00000393883 NEFMP07197 916 aa20.49■□□□□ 0.87
ZNF559-202ENST00000393883 CLSPNQ9HAW4 1339 aa20.44■□□□□ 0.86
ZNF559-202ENST00000393883 ZNF326Q5BKZ1 582 aaKnown RBP20.44■□□□□ 0.86
ZNF559-202ENST00000393883 NEUROD1Q13562 356 aa20.43■□□□□ 0.86
ZNF559-202ENST00000393883 ZBTB47Q9UFB7 747 aaPredicted RBP20.42■□□□□ 0.86
ZNF559-202ENST00000393883 ZNF777Q9ULD5 760 aaPredicted RBP20.38■□□□□ 0.85
ZNF559-202ENST00000393883 P3H3Q8IVL6 736 aa20.37■□□□□ 0.85
ZNF559-202ENST00000393883 STAG3Q9UJ98 1225 aa20.33■□□□□ 0.85
ZNF559-202ENST00000393883 CCDC180Q9P1Z9 1646 aa20.32■□□□□ 0.84
ZNF559-202ENST00000393883 ARID3CA6NKF2 412 aa20.3■□□□□ 0.84
ZNF559-202ENST00000393883 ANP32CO43423 234 aa20.29■□□□□ 0.84
ZNF559-202ENST00000393883 RB1CC1Q8TDY2 1594 aa20.28■□□□□ 0.84
ZNF559-202ENST00000393883 ZNF316A6NFI3 1004 aaPredicted RBP20.26■□□□□ 0.83
ZNF559-202ENST00000393883 ZCCHC6Q5VYS8 1495 aaKnown RBP20.26■□□□□ 0.83
ZNF559-202ENST00000393883 SLC24A1O60721 1099 aa20.22■□□□□ 0.83
ZNF559-202ENST00000393883 CHMP7Q8WUX9 453 aaPredicted RBP20.21■□□□□ 0.83
ZNF559-202ENST00000393883 DIEXFQ68CQ4 756 aaKnown RBP20.21■□□□□ 0.83
ZNF559-202ENST00000393883 CHGAP10645 457 aaKnown RBP20.14■□□□□ 0.81
ZNF559-202ENST00000393883 CANXP27824 592 aaKnown RBP20.13■□□□□ 0.81
ZNF559-202ENST00000393883 TSPY4P0CV99 314 aa20.1■□□□□ 0.81
ZNF559-202ENST00000393883 TSPY10P0CW01 314 aa20.1■□□□□ 0.81
ZNF559-202ENST00000393883 RTL5Q5HYW3 569 aaPredicted RBP20.04■□□□□ 0.8
ZNF559-202ENST00000393883 ACIN1Q9UKV3 1341 aaKnown RBP20.02■□□□□ 0.79
ZNF559-202ENST00000393883 NACADO15069 1562 aa20.01■□□□□ 0.79
ZNF559-202ENST00000393883 TONSLQ96HA7 1378 aa19.99■□□□□ 0.79
ZNF559-202ENST00000393883 PLPPR3Q6T4P5 718 aa19.98■□□□□ 0.79
ZNF559-202ENST00000393883 GTF3C3Q9Y5Q9 886 aa19.95■□□□□ 0.78
ZNF559-202ENST00000393883 MTUS2Q5JR59 1369 aa19.95■□□□□ 0.78
ZNF559-202ENST00000393883 PLEKHD1A6NEE1 506 aa19.9■□□□□ 0.78
ZNF559-202ENST00000393883 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.89■□□□□ 0.77
ZNF559-202ENST00000393883 RSF1Q96T23 1441 aaPredicted RBP19.86■□□□□ 0.77
ZNF559-202ENST00000393883 BAZ1BQ9UIG0 1483 aaKnown RBP19.84■□□□□ 0.77
ZNF559-202ENST00000393883 ERCC6Q03468 1493 aa19.84■□□□□ 0.77
ZNF559-202ENST00000393883 EEA1Q15075 1411 aa19.84■□□□□ 0.77
ZNF559-202ENST00000393883 PPP1R15AO75807 674 aaPredicted RBP19.8■□□□□ 0.76
ZNF559-202ENST00000393883 CHIC2Q9UKJ5 165 aa19.77■□□□□ 0.76
ZNF559-202ENST00000393883 KCNH8Q96L42 1107 aa19.74■□□□□ 0.75
ZNF559-202ENST00000393883 NPM2Q86SE8 214 aaKnown RBP19.74■□□□□ 0.75
ZNF559-202ENST00000393883 ARID4BQ4LE39 1312 aaPredicted RBP19.71■□□□□ 0.75
ZNF559-202ENST00000393883 BCL11AQ9H165 835 aa19.7■□□□□ 0.74
ZNF559-202ENST00000393883 KIF27Q86VH2 1401 aa19.7■□□□□ 0.74
ZNF559-202ENST00000393883 CLIP1P30622 1438 aa19.7■□□□□ 0.74
ZNF559-202ENST00000393883 C14orf37Q86TY3 774 aa19.68■□□□□ 0.74
ZNF559-202ENST00000393883 SCAF1Q9H7N4 1312 aaKnown RBP19.68■□□□□ 0.74
ZNF559-202ENST00000393883 WRNQ14191 1432 aaPredicted RBP eCLIP19.64■□□□□ 0.74
ZNF559-202ENST00000393883 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.64■□□□□ 0.73
ZNF559-202ENST00000393883 WDR43Q15061 677 aaKnown RBP eCLIP19.63■□□□□ 0.73
ZNF559-202ENST00000393883 GOLGA3Q08378 1498 aa19.61■□□□□ 0.73
ZNF559-202ENST00000393883 CFDP1Q9UEE9 299 aaPredicted RBP19.6■□□□□ 0.73
ZNF559-202ENST00000393883 TMC1Q8TDI8 760 aa19.59■□□□□ 0.73
ZNF559-202ENST00000393883 KDM2AQ9Y2K7 1162 aa19.59■□□□□ 0.73
ZNF559-202ENST00000393883 CDCA8Q53HL2 280 aa19.58■□□□□ 0.73
ZNF559-202ENST00000393883 UPF2Q9HAU5 1272 aaKnown RBP19.57■□□□□ 0.72
ZNF559-202ENST00000393883 HAP1P54257 671 aaPredicted RBP19.57■□□□□ 0.72
ZNF559-202ENST00000393883 BAZ1AQ9NRL2 1556 aaPredicted RBP19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms