RNA–Protein interactions for RNA: ENST00000599569.2

SSR4P1-203, Transcript of signal sequence receptor subunit 4 pseudogene 1, humanhuman

BASIC

Gene SSR4P1, Length 2,260 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P1-203ENST00000599569 NISCHQ9Y2I1 1504 aa34.12■■■■□ 3.05
SSR4P1-203ENST00000599569 CCDC180Q9P1Z9 1646 aa29.84■■■□□ 2.37
SSR4P1-203ENST00000599569 ABCC9O60706 1549 aa28.61■■■□□ 2.17
SSR4P1-203ENST00000599569 ZCCHC6Q5VYS8 1495 aaKnown RBP28.59■■■□□ 2.17
SSR4P1-203ENST00000599569 DCAF8L2P0C7V8 631 aa28.39■■■□□ 2.14
SSR4P1-203ENST00000599569 SHROOM4Q9ULL8 1493 aa28.34■■■□□ 2.13
SSR4P1-203ENST00000599569 DCAF1Q9Y4B6 1507 aa28.14■■■□□ 2.1
SSR4P1-203ENST00000599569 MYO15BQ96JP2 1530 aa27.9■■■□□ 2.06
SSR4P1-203ENST00000599569 NACADO15069 1562 aa27.87■■■□□ 2.05
SSR4P1-203ENST00000599569 RB1CC1Q8TDY2 1594 aa27.72■■■□□ 2.03
SSR4P1-203ENST00000599569 SUPT5HO00267 1087 aaKnown RBP27.67■■■□□ 2.02
SSR4P1-203ENST00000599569 SCRIBQ14160 1630 aa27.5■■□□□ 1.99
SSR4P1-203ENST00000599569 UNC13AQ9UPW8 1703 aa27.2■■□□□ 1.94
SSR4P1-203ENST00000599569 PABPN1Q86U42 306 aaKnown RBP eCLIP26.96■■□□□ 1.91
SSR4P1-203ENST00000599569 BICRAQ9NZM4 1560 aa26.94■■□□□ 1.9
SSR4P1-203ENST00000599569 CHIC1Q5VXU3 224 aa26.85■■□□□ 1.89
SSR4P1-203ENST00000599569 CECR2Q9BXF3 1484 aa26.6■■□□□ 1.85
SSR4P1-203ENST00000599569 RSF1Q96T23 1441 aaPredicted RBP26.59■■□□□ 1.85
SSR4P1-203ENST00000599569 MROH2BQ7Z745 1585 aa26.39■■□□□ 1.81
SSR4P1-203ENST00000599569 BAZ1AQ9NRL2 1556 aaPredicted RBP26.35■■□□□ 1.81
SSR4P1-203ENST00000599569 SMARCA4P51532 1647 aa26.29■■□□□ 1.8
SSR4P1-203ENST00000599569 WIZO95785 1651 aa26.16■■□□□ 1.78
SSR4P1-203ENST00000599569 EIF4G1Q04637 1599 aaKnown RBP26.14■■□□□ 1.78
SSR4P1-203ENST00000599569 ATAD2BQ9ULI0 1458 aa25.95■■□□□ 1.74
SSR4P1-203ENST00000599569 PEG3Q9GZU2 1588 aa25.94■■□□□ 1.74
SSR4P1-203ENST00000599569 LOC105371045A0A1W2PR82 267 aa25.94■■□□□ 1.74
SSR4P1-203ENST00000599569 TRIM41Q8WV44 630 aa25.9■■□□□ 1.74
SSR4P1-203ENST00000599569 SMARCA2P51531 1590 aa25.88■■□□□ 1.73
SSR4P1-203ENST00000599569 CC2D2AQ9P2K1 1620 aa25.85■■□□□ 1.73
SSR4P1-203ENST00000599569 TOP2AP11388 1531 aaKnown RBP25.83■■□□□ 1.73
SSR4P1-203ENST00000599569 BAZ1BQ9UIG0 1483 aaKnown RBP25.78■■□□□ 1.72
SSR4P1-203ENST00000599569 NCAPD3P42695 1498 aa25.75■■□□□ 1.71
SSR4P1-203ENST00000599569 HMGXB3Q12766 1538 aa25.67■■□□□ 1.7
SSR4P1-203ENST00000599569 CCDC88BA6NC98 1476 aa25.6■■□□□ 1.69
SSR4P1-203ENST00000599569 PCGF6Q9BYE7 350 aa25.58■■□□□ 1.69
SSR4P1-203ENST00000599569 DNAJC5BQ9UF47 199 aa25.56■■□□□ 1.68
SSR4P1-203ENST00000599569 FAM9AQ8IZU1 332 aaPredicted RBP25.54■■□□□ 1.68
SSR4P1-203ENST00000599569 HRCP23327 699 aa25.43■■□□□ 1.66
SSR4P1-203ENST00000599569 TRIM26Q12899 539 aaPredicted RBP25.29■■□□□ 1.64
SSR4P1-203ENST00000599569 ABCC8Q09428 1581 aa25.28■■□□□ 1.64
SSR4P1-203ENST00000599569 EHMT2Q96KQ7 1210 aa25.22■■□□□ 1.63
SSR4P1-203ENST00000599569 CFTRP13569 1480 aa25.1■■□□□ 1.61
SSR4P1-203ENST00000599569 CADPSQ9ULU8 1353 aa25.09■■□□□ 1.61
SSR4P1-203ENST00000599569 NESP48681 1621 aa25.03■■□□□ 1.6
SSR4P1-203ENST00000599569 SOGA1O94964 1423 aa25■■□□□ 1.59
SSR4P1-203ENST00000599569 WRNQ14191 1432 aaPredicted RBP eCLIP24.99■■□□□ 1.59
SSR4P1-203ENST00000599569 EEA1Q15075 1411 aa24.98■■□□□ 1.59
SSR4P1-203ENST00000599569 PRDM2Q13029 1718 aa24.92■■□□□ 1.58
SSR4P1-203ENST00000599569 LAMC3Q9Y6N6 1575 aa24.91■■□□□ 1.58
SSR4P1-203ENST00000599569 CSRNP3Q8WYN3 585 aa24.89■■□□□ 1.58
SSR4P1-203ENST00000599569 RUSC2Q8N2Y8 1516 aa24.88■■□□□ 1.57
SSR4P1-203ENST00000599569 SYNJ1O43426 1573 aa24.84■■□□□ 1.57
SSR4P1-203ENST00000599569 FANCD2Q9BXW9 1451 aa24.82■■□□□ 1.56
SSR4P1-203ENST00000599569 TNIKQ9UKE5 1360 aa24.81■■□□□ 1.56
SSR4P1-203ENST00000599569 PPARGC1BQ86YN6 1023 aaKnown RBP24.81■■□□□ 1.56
SSR4P1-203ENST00000599569 CEP162Q5TB80 1403 aa24.76■■□□□ 1.55
SSR4P1-203ENST00000599569 PDS5BQ9NTI5 1447 aa24.74■■□□□ 1.55
SSR4P1-203ENST00000599569 GOLGA3Q08378 1498 aa24.72■■□□□ 1.55
SSR4P1-203ENST00000599569 UBTFP17480 764 aaKnown RBP24.69■■□□□ 1.54
SSR4P1-203ENST00000599569 KIF21AQ7Z4S6 1674 aa24.69■■□□□ 1.54
SSR4P1-203ENST00000599569 CUX1P39880 1505 aa24.68■■□□□ 1.54
SSR4P1-203ENST00000599569 CEP164Q9UPV0 1460 aa24.68■■□□□ 1.54
SSR4P1-203ENST00000599569 ZEB1P37275 1124 aaPredicted RBP24.64■■□□□ 1.54
SSR4P1-203ENST00000599569 TOP2BQ02880 1626 aa24.64■■□□□ 1.53
SSR4P1-203ENST00000599569 KIF21BO75037 1637 aa24.61■■□□□ 1.53
SSR4P1-203ENST00000599569 BIVM-ERCC5R4GMW8 1640 aa24.61■■□□□ 1.53
SSR4P1-203ENST00000599569 URB2Q14146 1524 aaKnown RBP24.54■■□□□ 1.52
SSR4P1-203ENST00000599569 ERCC6Q03468 1493 aa24.53■■□□□ 1.52
SSR4P1-203ENST00000599569 TOPBP1Q92547 1522 aa24.52■■□□□ 1.52
SSR4P1-203ENST00000599569 DNMBPQ6XZF7 1577 aa24.52■■□□□ 1.52
SSR4P1-203ENST00000599569 FGD5Q6ZNL6 1462 aa24.45■■□□□ 1.51
SSR4P1-203ENST00000599569 MRC2Q9UBG0 1479 aa24.45■■□□□ 1.5
SSR4P1-203ENST00000599569 RAPGEF2Q9Y4G8 1499 aa24.43■■□□□ 1.5
SSR4P1-203ENST00000599569 CLIP1P30622 1438 aa24.39■■□□□ 1.49
SSR4P1-203ENST00000599569 POLA1P09884 1462 aaPredicted RBP24.38■■□□□ 1.49
SSR4P1-203ENST00000599569 THOC2Q8NI27 1593 aaKnown RBP24.34■■□□□ 1.49
SSR4P1-203ENST00000599569 RAD54L2Q9Y4B4 1467 aa24.34■■□□□ 1.49
SSR4P1-203ENST00000599569 TTBK1Q5TCY1 1321 aaPredicted RBP24.33■■□□□ 1.49
SSR4P1-203ENST00000599569 WDR62O43379 1518 aa24.33■■□□□ 1.49
SSR4P1-203ENST00000599569 PRXQ9BXM0 1461 aa24.31■■□□□ 1.48
SSR4P1-203ENST00000599569 ERICH3Q5RHP9 1530 aa24.3■■□□□ 1.48
SSR4P1-203ENST00000599569 KIF27Q86VH2 1401 aa24.28■■□□□ 1.48
SSR4P1-203ENST00000599569 VPS8Q8N3P4 1428 aa24.27■■□□□ 1.47
SSR4P1-203ENST00000599569 CUX2O14529 1486 aa24.25■■□□□ 1.47
SSR4P1-203ENST00000599569 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.24■■□□□ 1.47
SSR4P1-203ENST00000599569 ABCA10Q8WWZ4 1543 aa24.2■■□□□ 1.46
SSR4P1-203ENST00000599569 CCER1Q8TC90 406 aaPredicted RBP24.2■■□□□ 1.46
SSR4P1-203ENST00000599569 TARBP1Q13395 1621 aaKnown RBP24.17■■□□□ 1.46
SSR4P1-203ENST00000599569 WDR97A6NE52 1622 aa24.15■■□□□ 1.46
SSR4P1-203ENST00000599569 RANGAP1P46060 587 aaPredicted RBP24.14■■□□□ 1.46
SSR4P1-203ENST00000599569 TDRD9Q8NDG6 1382 aaKnown RBP24.13■■□□□ 1.45
SSR4P1-203ENST00000599569 APLP2Q06481 763 aa24.11■■□□□ 1.45
SSR4P1-203ENST00000599569 IFT140Q96RY7 1462 aa24.09■■□□□ 1.45
SSR4P1-203ENST00000599569 IGF1RP08069 1367 aa24.06■■□□□ 1.44
SSR4P1-203ENST00000599569 ZNF608Q9ULD9 1512 aaPredicted RBP24.05■■□□□ 1.44
SSR4P1-203ENST00000599569 ABCA5Q8WWZ7 1642 aa24.04■■□□□ 1.44
SSR4P1-203ENST00000599569 AQRO60306 1485 aaKnown RBP eCLIP24.03■■□□□ 1.44
SSR4P1-203ENST00000599569 ARAP1Q96P48 1450 aa24.03■■□□□ 1.44
SSR4P1-203ENST00000599569 GAPVD1Q14C86 1478 aa24.02■■□□□ 1.44
SSR4P1-203ENST00000599569 EIF4G3O43432 1585 aaKnown RBP23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms