RNA–Protein interactions for RNA: ENST00000368171.3

CD1D-201, Transcript of CD1d molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD1D, Length 2,253 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD1D-201ENST00000368171 NISCHQ9Y2I1 1504 aa38.71■■■■□ 3.79
CD1D-201ENST00000368171 CCDC180Q9P1Z9 1646 aa33.71■■■□□ 2.99
CD1D-201ENST00000368171 ABCC9O60706 1549 aa32.55■■■□□ 2.8
CD1D-201ENST00000368171 DCAF8L2P0C7V8 631 aa32.48■■■□□ 2.79
CD1D-201ENST00000368171 ZCCHC6Q5VYS8 1495 aaKnown RBP32.4■■■□□ 2.78
CD1D-201ENST00000368171 DCAF1Q9Y4B6 1507 aa31.81■■■□□ 2.68
CD1D-201ENST00000368171 SHROOM4Q9ULL8 1493 aa31.71■■■□□ 2.67
CD1D-201ENST00000368171 NACADO15069 1562 aa31.54■■■□□ 2.64
CD1D-201ENST00000368171 MYO15BQ96JP2 1530 aa31.51■■■□□ 2.63
CD1D-201ENST00000368171 RB1CC1Q8TDY2 1594 aa31.38■■■□□ 2.61
CD1D-201ENST00000368171 SCRIBQ14160 1630 aa31.24■■■□□ 2.59
CD1D-201ENST00000368171 UNC13AQ9UPW8 1703 aa30.85■■■□□ 2.53
CD1D-201ENST00000368171 PABPN1Q86U42 306 aaKnown RBP eCLIP30.77■■■□□ 2.52
CD1D-201ENST00000368171 BICRAQ9NZM4 1560 aa30.56■■■□□ 2.48
CD1D-201ENST00000368171 SUPT5HO00267 1087 aaKnown RBP30.34■■■□□ 2.45
CD1D-201ENST00000368171 CECR2Q9BXF3 1484 aa30.28■■■□□ 2.44
CD1D-201ENST00000368171 MROH2BQ7Z745 1585 aa29.99■■■□□ 2.39
CD1D-201ENST00000368171 RSF1Q96T23 1441 aaPredicted RBP29.98■■■□□ 2.39
CD1D-201ENST00000368171 BAZ1AQ9NRL2 1556 aaPredicted RBP29.85■■■□□ 2.37
CD1D-201ENST00000368171 SMARCA4P51532 1647 aa29.8■■■□□ 2.36
CD1D-201ENST00000368171 WIZO95785 1651 aa29.74■■■□□ 2.35
CD1D-201ENST00000368171 EIF4G1Q04637 1599 aaKnown RBP29.65■■■□□ 2.34
CD1D-201ENST00000368171 ATAD2BQ9ULI0 1458 aa29.45■■■□□ 2.3
CD1D-201ENST00000368171 PEG3Q9GZU2 1588 aa29.35■■■□□ 2.29
CD1D-201ENST00000368171 CC2D2AQ9P2K1 1620 aa29.33■■■□□ 2.29
CD1D-201ENST00000368171 SMARCA2P51531 1590 aa29.3■■■□□ 2.28
CD1D-201ENST00000368171 TOP2AP11388 1531 aaKnown RBP29.26■■■□□ 2.27
CD1D-201ENST00000368171 BAZ1BQ9UIG0 1483 aaKnown RBP29.25■■■□□ 2.27
CD1D-201ENST00000368171 NCAPD3P42695 1498 aa29.19■■■□□ 2.26
CD1D-201ENST00000368171 DNAJC5BQ9UF47 199 aa29.19■■■□□ 2.26
CD1D-201ENST00000368171 CCDC88BA6NC98 1476 aa29.1■■■□□ 2.25
CD1D-201ENST00000368171 HMGXB3Q12766 1538 aa29.03■■■□□ 2.24
CD1D-201ENST00000368171 CHIC1Q5VXU3 224 aa28.74■■■□□ 2.19
CD1D-201ENST00000368171 NESP48681 1621 aa28.5■■■□□ 2.15
CD1D-201ENST00000368171 CADPSQ9ULU8 1353 aa28.48■■■□□ 2.15
CD1D-201ENST00000368171 CFTRP13569 1480 aa28.48■■■□□ 2.15
CD1D-201ENST00000368171 ABCC8Q09428 1581 aa28.46■■■□□ 2.15
CD1D-201ENST00000368171 TRIM41Q8WV44 630 aa28.41■■■□□ 2.14
CD1D-201ENST00000368171 WRNQ14191 1432 aaPredicted RBP eCLIP28.2■■■□□ 2.1
CD1D-201ENST00000368171 LAMC3Q9Y6N6 1575 aa28.19■■■□□ 2.1
CD1D-201ENST00000368171 FANCD2Q9BXW9 1451 aa28.18■■■□□ 2.1
CD1D-201ENST00000368171 PRDM2Q13029 1718 aa28.16■■■□□ 2.1
CD1D-201ENST00000368171 SYNJ1O43426 1573 aa28.12■■■□□ 2.09
CD1D-201ENST00000368171 FAM9AQ8IZU1 332 aaPredicted RBP28.08■■■□□ 2.09
CD1D-201ENST00000368171 PDS5BQ9NTI5 1447 aa28.05■■■□□ 2.08
CD1D-201ENST00000368171 CUX1P39880 1505 aa28.03■■■□□ 2.08
CD1D-201ENST00000368171 KIF21AQ7Z4S6 1674 aa28.02■■■□□ 2.08
CD1D-201ENST00000368171 CEP164Q9UPV0 1460 aa27.99■■■□□ 2.07
CD1D-201ENST00000368171 TOP2BQ02880 1626 aa27.93■■■□□ 2.06
CD1D-201ENST00000368171 SOGA1O94964 1423 aa27.88■■■□□ 2.05
CD1D-201ENST00000368171 URB2Q14146 1524 aaKnown RBP27.87■■■□□ 2.05
CD1D-201ENST00000368171 BIVM-ERCC5R4GMW8 1640 aa27.86■■■□□ 2.05
CD1D-201ENST00000368171 EHMT2Q96KQ7 1210 aa27.85■■■□□ 2.05
CD1D-201ENST00000368171 RUSC2Q8N2Y8 1516 aa27.85■■■□□ 2.05
CD1D-201ENST00000368171 ERCC6Q03468 1493 aa27.85■■■□□ 2.05
CD1D-201ENST00000368171 TOPBP1Q92547 1522 aa27.82■■■□□ 2.04
CD1D-201ENST00000368171 LOC105371045A0A1W2PR82 267 aa27.81■■■□□ 2.04
CD1D-201ENST00000368171 FGD5Q6ZNL6 1462 aa27.77■■■□□ 2.04
CD1D-201ENST00000368171 DNMBPQ6XZF7 1577 aa27.77■■■□□ 2.04
CD1D-201ENST00000368171 RAD54L2Q9Y4B4 1467 aa27.71■■■□□ 2.03
CD1D-201ENST00000368171 MRC2Q9UBG0 1479 aa27.7■■■□□ 2.02
CD1D-201ENST00000368171 POLA1P09884 1462 aaPredicted RBP27.69■■■□□ 2.02
CD1D-201ENST00000368171 CSRNP3Q8WYN3 585 aa27.58■■■□□ 2.01
CD1D-201ENST00000368171 THOC2Q8NI27 1593 aaKnown RBP27.56■■■□□ 2
CD1D-201ENST00000368171 CUX2O14529 1486 aa27.56■■■□□ 2
CD1D-201ENST00000368171 WDR62O43379 1518 aa27.54■■■□□ 2
CD1D-201ENST00000368171 TDRD9Q8NDG6 1382 aaKnown RBP27.5■■□□□ 1.99
CD1D-201ENST00000368171 KIF27Q86VH2 1401 aa27.47■■□□□ 1.99
CD1D-201ENST00000368171 ABCA10Q8WWZ4 1543 aa27.43■■□□□ 1.98
CD1D-201ENST00000368171 EEA1Q15075 1411 aa27.43■■□□□ 1.98
CD1D-201ENST00000368171 TARBP1Q13395 1621 aaKnown RBP27.41■■□□□ 1.98
CD1D-201ENST00000368171 IGF1RP08069 1367 aa27.37■■□□□ 1.97
CD1D-201ENST00000368171 AQRO60306 1485 aaKnown RBP eCLIP27.36■■□□□ 1.97
CD1D-201ENST00000368171 ZNF608Q9ULD9 1512 aaPredicted RBP27.36■■□□□ 1.97
CD1D-201ENST00000368171 WDR97A6NE52 1622 aa27.33■■□□□ 1.97
CD1D-201ENST00000368171 IFT140Q96RY7 1462 aa27.29■■□□□ 1.96
CD1D-201ENST00000368171 UBTFP17480 764 aaKnown RBP27.29■■□□□ 1.96
CD1D-201ENST00000368171 GAPVD1Q14C86 1478 aa27.27■■□□□ 1.96
CD1D-201ENST00000368171 RAPGEF2Q9Y4G8 1499 aa27.27■■□□□ 1.96
CD1D-201ENST00000368171 ABCA5Q8WWZ7 1642 aa27.22■■□□□ 1.95
CD1D-201ENST00000368171 PRXQ9BXM0 1461 aa27.21■■□□□ 1.95
CD1D-201ENST00000368171 CARMIL1Q5VZK9 1371 aa27.2■■□□□ 1.94
CD1D-201ENST00000368171 RANGAP1P46060 587 aaPredicted RBP27.17■■□□□ 1.94
CD1D-201ENST00000368171 GOLGA3Q08378 1498 aa27.16■■□□□ 1.94
CD1D-201ENST00000368171 KIF21BO75037 1637 aa27.15■■□□□ 1.94
CD1D-201ENST00000368171 EIF4G3O43432 1585 aaKnown RBP27.11■■□□□ 1.93
CD1D-201ENST00000368171 PBRM1Q86U86 1689 aa27.07■■□□□ 1.92
CD1D-201ENST00000368171 ERICH3Q5RHP9 1530 aa27.06■■□□□ 1.92
CD1D-201ENST00000368171 GRIN2BQ13224 1484 aa27.06■■□□□ 1.92
CD1D-201ENST00000368171 TNIKQ9UKE5 1360 aa27.04■■□□□ 1.92
CD1D-201ENST00000368171 SNAPC4Q5SXM2 1469 aa26.99■■□□□ 1.91
CD1D-201ENST00000368171 FBLN2P98095 1184 aa26.98■■□□□ 1.91
CD1D-201ENST00000368171 CUL7Q14999 1698 aa26.97■■□□□ 1.91
CD1D-201ENST00000368171 CEP162Q5TB80 1403 aa26.94■■□□□ 1.9
CD1D-201ENST00000368171 FHAD1B1AJZ9 1412 aa26.91■■□□□ 1.9
CD1D-201ENST00000368171 ADAMTS12P58397 1594 aa26.89■■□□□ 1.9
CD1D-201ENST00000368171 CHMP7Q8WUX9 453 aaPredicted RBP26.88■■□□□ 1.89
CD1D-201ENST00000368171 MAGI1Q96QZ7 1491 aaPredicted RBP26.81■■□□□ 1.88
CD1D-201ENST00000368171 CLIP1P30622 1438 aa26.8■■□□□ 1.88
CD1D-201ENST00000368171 P3H3Q8IVL6 736 aa26.77■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 140.7 ms