RNA–Protein interactions for RNA: ENST00000408483.1

MIR1238-201, Transcript of microRNA 1238, humanhuman

BASIC

Gene MIR1238, Length 83 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR1238-201ENST00000408483 NISCHQ9Y2I1 1504 aa47.2■■■■■ 5.15
MIR1238-201ENST00000408483 CCDC180Q9P1Z9 1646 aa42.09■■■■■ 4.33
MIR1238-201ENST00000408483 ABCC9O60706 1549 aa41.78■■■■■ 4.28
MIR1238-201ENST00000408483 RB1CC1Q8TDY2 1594 aa39.89■■■■□ 3.98
MIR1238-201ENST00000408483 DCAF8L2P0C7V8 631 aa39.82■■■■□ 3.97
MIR1238-201ENST00000408483 NACADO15069 1562 aa39.72■■■■□ 3.95
MIR1238-201ENST00000408483 MYO15BQ96JP2 1530 aa39.26■■■■□ 3.88
MIR1238-201ENST00000408483 ZCCHC6Q5VYS8 1495 aaKnown RBP39.21■■■■□ 3.87
MIR1238-201ENST00000408483 PABPN1Q86U42 306 aaKnown RBP eCLIP39.02■■■■□ 3.84
MIR1238-201ENST00000408483 DCAF1Q9Y4B6 1507 aa38.95■■■■□ 3.83
MIR1238-201ENST00000408483 UNC13AQ9UPW8 1703 aa38.95■■■■□ 3.83
MIR1238-201ENST00000408483 DNAJC5BQ9UF47 199 aa38.76■■■■□ 3.8
MIR1238-201ENST00000408483 BICRAQ9NZM4 1560 aa38.7■■■■□ 3.79
MIR1238-201ENST00000408483 SCRIBQ14160 1630 aa38.5■■■■□ 3.75
MIR1238-201ENST00000408483 SHROOM4Q9ULL8 1493 aa38.16■■■■□ 3.7
MIR1238-201ENST00000408483 EIF4G1Q04637 1599 aaKnown RBP37.73■■■■□ 3.63
MIR1238-201ENST00000408483 CC2D2AQ9P2K1 1620 aa37.7■■■■□ 3.63
MIR1238-201ENST00000408483 CECR2Q9BXF3 1484 aa37.55■■■■□ 3.6
MIR1238-201ENST00000408483 SMARCA4P51532 1647 aa36.72■■■■□ 3.47
MIR1238-201ENST00000408483 NCAPD3P42695 1498 aa36.66■■■■□ 3.46
MIR1238-201ENST00000408483 ATAD2BQ9ULI0 1458 aa36.65■■■■□ 3.46
MIR1238-201ENST00000408483 BAZ1AQ9NRL2 1556 aaPredicted RBP36.61■■■■□ 3.45
MIR1238-201ENST00000408483 SMARCA2P51531 1590 aa36.55■■■■□ 3.44
MIR1238-201ENST00000408483 HMGXB3Q12766 1538 aa36.42■■■■□ 3.42
MIR1238-201ENST00000408483 MROH2BQ7Z745 1585 aa36.4■■■■□ 3.42
MIR1238-201ENST00000408483 BAZ1BQ9UIG0 1483 aaKnown RBP36.35■■■■□ 3.41
MIR1238-201ENST00000408483 PEG3Q9GZU2 1588 aa36.3■■■■□ 3.4
MIR1238-201ENST00000408483 ERCC6Q03468 1493 aa36.05■■■■□ 3.36
MIR1238-201ENST00000408483 NESP48681 1621 aa36.01■■■■□ 3.35
MIR1238-201ENST00000408483 WIZO95785 1651 aa36■■■■□ 3.35
MIR1238-201ENST00000408483 RSF1Q96T23 1441 aaPredicted RBP35.83■■■■□ 3.33
MIR1238-201ENST00000408483 LAMC3Q9Y6N6 1575 aa35.76■■■■□ 3.32
MIR1238-201ENST00000408483 CUX2O14529 1486 aa35.73■■■■□ 3.31
MIR1238-201ENST00000408483 CADPSQ9ULU8 1353 aa35.61■■■■□ 3.29
MIR1238-201ENST00000408483 PDS5BQ9NTI5 1447 aa35.58■■■■□ 3.29
MIR1238-201ENST00000408483 TOP2AP11388 1531 aaKnown RBP35.55■■■■□ 3.28
MIR1238-201ENST00000408483 KIF21AQ7Z4S6 1674 aa35.51■■■■□ 3.28
MIR1238-201ENST00000408483 THOC2Q8NI27 1593 aaKnown RBP35.48■■■■□ 3.27
MIR1238-201ENST00000408483 CFTRP13569 1480 aa35.28■■■■□ 3.24
MIR1238-201ENST00000408483 MRC2Q9UBG0 1479 aa35.25■■■■□ 3.23
MIR1238-201ENST00000408483 FANCD2Q9BXW9 1451 aa35.22■■■■□ 3.23
MIR1238-201ENST00000408483 CEP164Q9UPV0 1460 aa35.22■■■■□ 3.23
MIR1238-201ENST00000408483 DNAJC5Q9H3Z4 198 aa35.21■■■■□ 3.23
MIR1238-201ENST00000408483 CCDC88BA6NC98 1476 aa35.17■■■■□ 3.22
MIR1238-201ENST00000408483 WDR62O43379 1518 aa35.11■■■■□ 3.21
MIR1238-201ENST00000408483 PRDM2Q13029 1718 aa34.91■■■■□ 3.18
MIR1238-201ENST00000408483 URB2Q14146 1524 aaKnown RBP34.89■■■■□ 3.18
MIR1238-201ENST00000408483 SUPT5HO00267 1087 aaKnown RBP34.72■■■■□ 3.15
MIR1238-201ENST00000408483 TOPBP1Q92547 1522 aa34.6■■■■□ 3.13
MIR1238-201ENST00000408483 ABCC8Q09428 1581 aa34.52■■■■□ 3.12
MIR1238-201ENST00000408483 DNMBPQ6XZF7 1577 aa34.49■■■■□ 3.11
MIR1238-201ENST00000408483 IFT140Q96RY7 1462 aa34.47■■■■□ 3.11
MIR1238-201ENST00000408483 ZNF608Q9ULD9 1512 aaPredicted RBP34.4■■■■□ 3.1
MIR1238-201ENST00000408483 POLA1P09884 1462 aaPredicted RBP34.27■■■■□ 3.08
MIR1238-201ENST00000408483 OSCARQ8IYS5 282 aa34.24■■■■□ 3.07
MIR1238-201ENST00000408483 TARBP1Q13395 1621 aaKnown RBP34.22■■■■□ 3.07
MIR1238-201ENST00000408483 EIF4G3O43432 1585 aaKnown RBP34.2■■■■□ 3.07
MIR1238-201ENST00000408483 RAD54L2Q9Y4B4 1467 aa34.18■■■■□ 3.06
MIR1238-201ENST00000408483 CUX1P39880 1505 aa34.18■■■■□ 3.06
MIR1238-201ENST00000408483 AQRO60306 1485 aaKnown RBP eCLIP34.17■■■■□ 3.06
MIR1238-201ENST00000408483 SOGA1O94964 1423 aa34.16■■■■□ 3.06
MIR1238-201ENST00000408483 FGD5Q6ZNL6 1462 aa34.14■■■■□ 3.06
MIR1238-201ENST00000408483 TDRD9Q8NDG6 1382 aaKnown RBP34.05■■■■□ 3.04
MIR1238-201ENST00000408483 TRIM41Q8WV44 630 aa33.99■■■■□ 3.03
MIR1238-201ENST00000408483 FBLN2P98095 1184 aa33.93■■■■□ 3.02
MIR1238-201ENST00000408483 WDR97A6NE52 1622 aa33.86■■■■□ 3.01
MIR1238-201ENST00000408483 CHD1O14646 1710 aa33.85■■■■□ 3.01
MIR1238-201ENST00000408483 SNAPC4Q5SXM2 1469 aa33.82■■■■□ 3.01
MIR1238-201ENST00000408483 WRNQ14191 1432 aaPredicted RBP eCLIP33.8■■■■□ 3
MIR1238-201ENST00000408483 GRIN2BQ13224 1484 aa33.78■■■■□ 3
MIR1238-201ENST00000408483 ABCA10Q8WWZ4 1543 aa33.74■■■□□ 2.99
MIR1238-201ENST00000408483 GAPVD1Q14C86 1478 aa33.74■■■□□ 2.99
MIR1238-201ENST00000408483 SYNJ1O43426 1573 aa33.73■■■□□ 2.99
MIR1238-201ENST00000408483 TOP2BQ02880 1626 aa33.72■■■□□ 2.99
MIR1238-201ENST00000408483 MAGI1Q96QZ7 1491 aaPredicted RBP33.71■■■□□ 2.99
MIR1238-201ENST00000408483 CHMP7Q8WUX9 453 aaPredicted RBP33.71■■■□□ 2.99
MIR1238-201ENST00000408483 RIMBP3CA6NJZ7 1639 aa33.71■■■□□ 2.99
MIR1238-201ENST00000408483 RIMBP3BA6NNM3 1639 aa33.71■■■□□ 2.99
MIR1238-201ENST00000408483 RIMBP3Q9UFD9 1639 aa33.71■■■□□ 2.99
MIR1238-201ENST00000408483 BIVM-ERCC5R4GMW8 1640 aa33.71■■■□□ 2.99
MIR1238-201ENST00000408483 ARHGEF11O15085 1522 aa33.66■■■□□ 2.98
MIR1238-201ENST00000408483 PBRM1Q86U86 1689 aa33.65■■■□□ 2.98
MIR1238-201ENST00000408483 ABCA5Q8WWZ7 1642 aa33.64■■■□□ 2.98
MIR1238-201ENST00000408483 SYNJ2O15056 1496 aa33.61■■■□□ 2.97
MIR1238-201ENST00000408483 CLASP1Q7Z460 1538 aa33.47■■■□□ 2.95
MIR1238-201ENST00000408483 CYB5RLQ6IPT4 315 aa33.46■■■□□ 2.95
MIR1238-201ENST00000408483 ADAMTS12P58397 1594 aa33.37■■■□□ 2.93
MIR1238-201ENST00000408483 ARAP1Q96P48 1450 aa33.37■■■□□ 2.93
MIR1238-201ENST00000408483 GRIN2AQ12879 1464 aa33.34■■■□□ 2.93
MIR1238-201ENST00000408483 ERICH3Q5RHP9 1530 aa33.33■■■□□ 2.93
MIR1238-201ENST00000408483 FHAD1B1AJZ9 1412 aa33.31■■■□□ 2.92
MIR1238-201ENST00000408483 CEP170Q5SW79 1584 aa33.2■■■□□ 2.91
MIR1238-201ENST00000408483 NUP160Q12769 1436 aa33.19■■■□□ 2.9
MIR1238-201ENST00000408483 KIF27Q86VH2 1401 aa33.12■■■□□ 2.89
MIR1238-201ENST00000408483 IGF1RP08069 1367 aa33.05■■■□□ 2.88
MIR1238-201ENST00000408483 ERCC6L2Q5T890 1561 aa33.03■■■□□ 2.88
MIR1238-201ENST00000408483 TRHP20396 242 aaPredicted RBP32.98■■■□□ 2.87
MIR1238-201ENST00000408483 SHROOM2Q13796 1616 aa32.95■■■□□ 2.87
MIR1238-201ENST00000408483 CUL7Q14999 1698 aa32.93■■■□□ 2.86
MIR1238-201ENST00000408483 JPH4Q96JJ6 628 aa32.92■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms