RNA–Protein interactions for RNA: ENST00000618781.1

SIT1-204, Transcript of signaling threshold regulating transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SIT1, Length 1,317 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIT1-204ENST00000618781 NISCHQ9Y2I1 1504 aa41.46■■■■■ 4.23
SIT1-204ENST00000618781 ABCC9O60706 1549 aa37.74■■■■□ 3.63
SIT1-204ENST00000618781 CCDC180Q9P1Z9 1646 aa37.45■■■■□ 3.59
SIT1-204ENST00000618781 DNAJC5BQ9UF47 199 aa35.92■■■■□ 3.34
SIT1-204ENST00000618781 RB1CC1Q8TDY2 1594 aa35.79■■■■□ 3.32
SIT1-204ENST00000618781 NACADO15069 1562 aa35.48■■■■□ 3.27
SIT1-204ENST00000618781 UNC13AQ9UPW8 1703 aa35.11■■■■□ 3.21
SIT1-204ENST00000618781 PABPN1Q86U42 306 aaKnown RBP eCLIP35.02■■■■□ 3.2
SIT1-204ENST00000618781 MYO15BQ96JP2 1530 aa34.94■■■■□ 3.18
SIT1-204ENST00000618781 DCAF8L2P0C7V8 631 aa34.9■■■■□ 3.18
SIT1-204ENST00000618781 BICRAQ9NZM4 1560 aa34.87■■■■□ 3.17
SIT1-204ENST00000618781 SHROOM4Q9ULL8 1493 aa34.34■■■■□ 3.09
SIT1-204ENST00000618781 DCAF1Q9Y4B6 1507 aa34.3■■■■□ 3.08
SIT1-204ENST00000618781 ZCCHC6Q5VYS8 1495 aaKnown RBP34.26■■■■□ 3.08
SIT1-204ENST00000618781 CC2D2AQ9P2K1 1620 aa34.15■■■■□ 3.06
SIT1-204ENST00000618781 CECR2Q9BXF3 1484 aa34.08■■■■□ 3.05
SIT1-204ENST00000618781 EIF4G1Q04637 1599 aaKnown RBP33.98■■■■□ 3.03
SIT1-204ENST00000618781 SCRIBQ14160 1630 aa33.94■■■■□ 3.02
SIT1-204ENST00000618781 DNAJC5Q9H3Z4 198 aa33.31■■■□□ 2.92
SIT1-204ENST00000618781 CUX2O14529 1486 aa32.81■■■□□ 2.84
SIT1-204ENST00000618781 NCAPD3P42695 1498 aa32.79■■■□□ 2.84
SIT1-204ENST00000618781 ATAD2BQ9ULI0 1458 aa32.58■■■□□ 2.81
SIT1-204ENST00000618781 ERCC6Q03468 1493 aa32.56■■■□□ 2.8
SIT1-204ENST00000618781 HMGXB3Q12766 1538 aa32.49■■■□□ 2.79
SIT1-204ENST00000618781 SMARCA2P51531 1590 aa32.44■■■□□ 2.78
SIT1-204ENST00000618781 SMARCA4P51532 1647 aa32.43■■■□□ 2.78
SIT1-204ENST00000618781 NESP48681 1621 aa32.33■■■□□ 2.77
SIT1-204ENST00000618781 PEG3Q9GZU2 1588 aa32.22■■■□□ 2.75
SIT1-204ENST00000618781 BAZ1AQ9NRL2 1556 aaPredicted RBP32.18■■■□□ 2.74
SIT1-204ENST00000618781 THOC2Q8NI27 1593 aaKnown RBP32.17■■■□□ 2.74
SIT1-204ENST00000618781 BAZ1BQ9UIG0 1483 aaKnown RBP32.16■■■□□ 2.74
SIT1-204ENST00000618781 LAMC3Q9Y6N6 1575 aa32.09■■■□□ 2.73
SIT1-204ENST00000618781 KIF21AQ7Z4S6 1674 aa31.95■■■□□ 2.71
SIT1-204ENST00000618781 MROH2BQ7Z745 1585 aa31.91■■■□□ 2.7
SIT1-204ENST00000618781 PDS5BQ9NTI5 1447 aa31.86■■■□□ 2.69
SIT1-204ENST00000618781 CADPSQ9ULU8 1353 aa31.7■■■□□ 2.67
SIT1-204ENST00000618781 WDR62O43379 1518 aa31.62■■■□□ 2.65
SIT1-204ENST00000618781 MRC2Q9UBG0 1479 aa31.62■■■□□ 2.65
SIT1-204ENST00000618781 WIZO95785 1651 aa31.5■■■□□ 2.63
SIT1-204ENST00000618781 TRIM41Q8WV44 630 aa31.45■■■□□ 2.62
SIT1-204ENST00000618781 CEP164Q9UPV0 1460 aa31.37■■■□□ 2.61
SIT1-204ENST00000618781 FANCD2Q9BXW9 1451 aa31.32■■■□□ 2.6
SIT1-204ENST00000618781 CFTRP13569 1480 aa31.29■■■□□ 2.6
SIT1-204ENST00000618781 OSCARQ8IYS5 282 aa31.16■■■□□ 2.58
SIT1-204ENST00000618781 URB2Q14146 1524 aaKnown RBP31.13■■■□□ 2.57
SIT1-204ENST00000618781 RSF1Q96T23 1441 aaPredicted RBP31.09■■■□□ 2.57
SIT1-204ENST00000618781 TOP2AP11388 1531 aaKnown RBP31.07■■■□□ 2.56
SIT1-204ENST00000618781 PRDM2Q13029 1718 aa30.98■■■□□ 2.55
SIT1-204ENST00000618781 RIMBP3CA6NJZ7 1639 aa30.86■■■□□ 2.53
SIT1-204ENST00000618781 RIMBP3BA6NNM3 1639 aa30.86■■■□□ 2.53
SIT1-204ENST00000618781 RIMBP3Q9UFD9 1639 aa30.86■■■□□ 2.53
SIT1-204ENST00000618781 IFT140Q96RY7 1462 aa30.79■■■□□ 2.52
SIT1-204ENST00000618781 ZNF608Q9ULD9 1512 aaPredicted RBP30.79■■■□□ 2.52
SIT1-204ENST00000618781 CCDC88BA6NC98 1476 aa30.72■■■□□ 2.51
SIT1-204ENST00000618781 ARHGEF11O15085 1522 aa30.71■■■□□ 2.51
SIT1-204ENST00000618781 TOPBP1Q92547 1522 aa30.7■■■□□ 2.51
SIT1-204ENST00000618781 ABCC8Q09428 1581 aa30.62■■■□□ 2.49
SIT1-204ENST00000618781 EIF4G3O43432 1585 aaKnown RBP30.61■■■□□ 2.49
SIT1-204ENST00000618781 DNMBPQ6XZF7 1577 aa30.55■■■□□ 2.48
SIT1-204ENST00000618781 TARBP1Q13395 1621 aaKnown RBP30.53■■■□□ 2.48
SIT1-204ENST00000618781 CHD1O14646 1710 aa30.49■■■□□ 2.47
SIT1-204ENST00000618781 AQRO60306 1485 aaKnown RBP eCLIP30.43■■■□□ 2.46
SIT1-204ENST00000618781 CYB5RLQ6IPT4 315 aa30.41■■■□□ 2.46
SIT1-204ENST00000618781 ARAP1Q96P48 1450 aa30.38■■■□□ 2.45
SIT1-204ENST00000618781 POLA1P09884 1462 aaPredicted RBP30.36■■■□□ 2.45
SIT1-204ENST00000618781 RAD54L2Q9Y4B4 1467 aa30.21■■■□□ 2.43
SIT1-204ENST00000618781 WDR97A6NE52 1622 aa30.19■■■□□ 2.42
SIT1-204ENST00000618781 CLASP1Q7Z460 1538 aa30.17■■■□□ 2.42
SIT1-204ENST00000618781 FBLN2P98095 1184 aa30.17■■■□□ 2.42
SIT1-204ENST00000618781 SOGA1O94964 1423 aa30.16■■■□□ 2.42
SIT1-204ENST00000618781 TDRD9Q8NDG6 1382 aaKnown RBP30.14■■■□□ 2.42
SIT1-204ENST00000618781 TRHP20396 242 aaPredicted RBP30.13■■■□□ 2.41
SIT1-204ENST00000618781 SNAPC4Q5SXM2 1469 aa30.09■■■□□ 2.41
SIT1-204ENST00000618781 FGD5Q6ZNL6 1462 aa30.07■■■□□ 2.4
SIT1-204ENST00000618781 MAGI1Q96QZ7 1491 aaPredicted RBP30.04■■■□□ 2.4
SIT1-204ENST00000618781 SYNJ1O43426 1573 aa30.02■■■□□ 2.4
SIT1-204ENST00000618781 CUX1P39880 1505 aa30.01■■■□□ 2.39
SIT1-204ENST00000618781 GRIN2BQ13224 1484 aa29.97■■■□□ 2.39
SIT1-204ENST00000618781 CHMP7Q8WUX9 453 aaPredicted RBP29.95■■■□□ 2.38
SIT1-204ENST00000618781 SYNJ2O15056 1496 aa29.94■■■□□ 2.38
SIT1-204ENST00000618781 PBRM1Q86U86 1689 aa29.86■■■□□ 2.37
SIT1-204ENST00000618781 GAPVD1Q14C86 1478 aa29.8■■■□□ 2.36
SIT1-204ENST00000618781 ABCA5Q8WWZ7 1642 aa29.77■■■□□ 2.36
SIT1-204ENST00000618781 ABCA10Q8WWZ4 1543 aa29.76■■■□□ 2.35
SIT1-204ENST00000618781 ERCC6L2Q5T890 1561 aa29.62■■■□□ 2.33
SIT1-204ENST00000618781 GRIN2AQ12879 1464 aa29.6■■■□□ 2.33
SIT1-204ENST00000618781 NUP160Q12769 1436 aa29.57■■■□□ 2.32
SIT1-204ENST00000618781 AEBP2Q6ZN18 517 aaPredicted RBP29.57■■■□□ 2.32
SIT1-204ENST00000618781 ADAMTS12P58397 1594 aa29.54■■■□□ 2.32
SIT1-204ENST00000618781 CEP170Q5SW79 1584 aa29.54■■■□□ 2.32
SIT1-204ENST00000618781 SHROOM2Q13796 1616 aa29.54■■■□□ 2.32
SIT1-204ENST00000618781 WRNQ14191 1432 aaPredicted RBP eCLIP29.47■■■□□ 2.31
SIT1-204ENST00000618781 BIVM-ERCC5R4GMW8 1640 aa29.45■■■□□ 2.31
SIT1-204ENST00000618781 TOP2BQ02880 1626 aa29.42■■■□□ 2.3
SIT1-204ENST00000618781 FHAD1B1AJZ9 1412 aa29.41■■■□□ 2.3
SIT1-204ENST00000618781 KIF13AQ9H1H9 1805 aa29.4■■■□□ 2.3
SIT1-204ENST00000618781 ERICH3Q5RHP9 1530 aa29.37■■■□□ 2.29
SIT1-204ENST00000618781 PRG4Q92954 1404 aaPredicted RBP29.23■■■□□ 2.27
SIT1-204ENST00000618781 JPH4Q96JJ6 628 aa29.2■■■□□ 2.26
SIT1-204ENST00000618781 SUPT5HO00267 1087 aaKnown RBP29.15■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms