RNA–Protein interactions for RNA: ENST00000374232.7

SNX30-201, Transcript of sorting nexin family member 30, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNX30, Length 7,622 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30-201ENST00000374232 DCAF8L2P0C7V8 631 aa25.35■■□□□ 1.65
SNX30-201ENST00000374232 EHMT2Q96KQ7 1210 aa24.36■■□□□ 1.49
SNX30-201ENST00000374232 SUPT5HO00267 1087 aaKnown RBP24.01■■□□□ 1.43
SNX30-201ENST00000374232 SHROOM4Q9ULL8 1493 aa23.52■■□□□ 1.36
SNX30-201ENST00000374232 TTBK1Q5TCY1 1321 aaPredicted RBP23.47■■□□□ 1.35
SNX30-201ENST00000374232 PELP1Q8IZL8 1130 aaKnown RBP23.12■■□□□ 1.29
SNX30-201ENST00000374232 FAM9AQ8IZU1 332 aaPredicted RBP22.97■■□□□ 1.27
SNX30-201ENST00000374232 RANGAP1P46060 587 aaPredicted RBP22.92■■□□□ 1.26
SNX30-201ENST00000374232 PCGF6Q9BYE7 350 aa22.79■■□□□ 1.24
SNX30-201ENST00000374232 ERICH6Q7L0X2 663 aa22.76■■□□□ 1.23
SNX30-201ENST00000374232 APLP2Q06481 763 aa22.68■■□□□ 1.22
SNX30-201ENST00000374232 YTHDC1Q96MU7 727 aaKnown RBP22.57■■□□□ 1.2
SNX30-201ENST00000374232 MYT1Q01538 1121 aa22.51■■□□□ 1.19
SNX30-201ENST00000374232 ATP1B4Q9UN42 357 aaPredicted RBP22.49■■□□□ 1.19
SNX30-201ENST00000374232 PPARGC1BQ86YN6 1023 aaKnown RBP22.34■■□□□ 1.17
SNX30-201ENST00000374232 CCER1Q8TC90 406 aaPredicted RBP22.27■■□□□ 1.16
SNX30-201ENST00000374232 CENPBP07199 599 aaPredicted RBP22.16■■□□□ 1.14
SNX30-201ENST00000374232 CNGB1Q14028 1251 aaPredicted RBP22.08■■□□□ 1.13
SNX30-201ENST00000374232 POLR3GLQ9BT43 218 aa21.89■■□□□ 1.09
SNX30-201ENST00000374232 NEFLP07196 543 aa21.88■■□□□ 1.09
SNX30-201ENST00000374232 UBTFP17480 764 aaKnown RBP21.81■■□□□ 1.08
SNX30-201ENST00000374232 CHIC1Q5VXU3 224 aa21.76■■□□□ 1.07
SNX30-201ENST00000374232 TRIM41Q8WV44 630 aa21.76■■□□□ 1.07
SNX30-201ENST00000374232 ITGAEP38570 1179 aa21.72■■□□□ 1.07
SNX30-201ENST00000374232 NISCHQ9Y2I1 1504 aa21.63■■□□□ 1.05
SNX30-201ENST00000374232 MYT1LQ9UL68 1186 aa21.62■■□□□ 1.05
SNX30-201ENST00000374232 ZEB1P37275 1124 aaPredicted RBP21.56■■□□□ 1.04
SNX30-201ENST00000374232 DAXXQ9UER7 740 aaPredicted RBP21.55■■□□□ 1.04
SNX30-201ENST00000374232 SLC4A1APQ9BWU0 796 aaKnown RBP21.41■■□□□ 1.02
SNX30-201ENST00000374232 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.34■■□□□ 1.01
SNX30-201ENST00000374232 HNRNPUL2Q1KMD3 747 aaKnown RBP21.34■■□□□ 1.01
SNX30-201ENST00000374232 BCL11AQ9H165 835 aa21.26■□□□□ 0.99
SNX30-201ENST00000374232 LOC105371045A0A1W2PR82 267 aa21.26■□□□□ 0.99
SNX30-201ENST00000374232 HRCP23327 699 aa21.23■□□□□ 0.99
SNX30-201ENST00000374232 BCANQ96GW7 911 aa21.23■□□□□ 0.99
SNX30-201ENST00000374232 CLSPNQ9HAW4 1339 aa21.13■□□□□ 0.97
SNX30-201ENST00000374232 ZNF316A6NFI3 1004 aaPredicted RBP21.08■□□□□ 0.97
SNX30-201ENST00000374232 TRIM26Q12899 539 aaPredicted RBP21.06■□□□□ 0.96
SNX30-201ENST00000374232 RTL5Q5HYW3 569 aaPredicted RBP20.96■□□□□ 0.95
SNX30-201ENST00000374232 NEUROD1Q13562 356 aa20.86■□□□□ 0.93
SNX30-201ENST00000374232 SLC24A1O60721 1099 aa20.86■□□□□ 0.93
SNX30-201ENST00000374232 DIEXFQ68CQ4 756 aaKnown RBP20.83■□□□□ 0.93
SNX30-201ENST00000374232 FAM50AQ14320 339 aaKnown RBP20.75■□□□□ 0.91
SNX30-201ENST00000374232 ZNF326Q5BKZ1 582 aaKnown RBP20.75■□□□□ 0.91
SNX30-201ENST00000374232 GTF3C3Q9Y5Q9 886 aa20.74■□□□□ 0.91
SNX30-201ENST00000374232 TRIM52Q96A61 297 aa20.68■□□□□ 0.9
SNX30-201ENST00000374232 NPM2Q86SE8 214 aaKnown RBP20.59■□□□□ 0.89
SNX30-201ENST00000374232 ZBTB47Q9UFB7 747 aaPredicted RBP20.51■□□□□ 0.87
SNX30-201ENST00000374232 ARID3CA6NKF2 412 aa20.5■□□□□ 0.87
SNX30-201ENST00000374232 EIF5BO60841 1220 aaKnown RBP20.47■□□□□ 0.87
SNX30-201ENST00000374232 CDK11AQ9UQ88 783 aaPredicted RBP20.43■□□□□ 0.86
SNX30-201ENST00000374232 CANXP27824 592 aaKnown RBP20.42■□□□□ 0.86
SNX30-201ENST00000374232 ARXQ96QS3 562 aa20.41■□□□□ 0.86
SNX30-201ENST00000374232 PLPPR3Q6T4P5 718 aa20.4■□□□□ 0.86
SNX30-201ENST00000374232 ANP32CO43423 234 aa20.31■□□□□ 0.84
SNX30-201ENST00000374232 SALL2Q9Y467 1007 aaPredicted RBP20.29■□□□□ 0.84
SNX30-201ENST00000374232 FBLN2P98095 1184 aa20.25■□□□□ 0.83
SNX30-201ENST00000374232 P3H3Q8IVL6 736 aa20.24■□□□□ 0.83
SNX30-201ENST00000374232 NBR1Q14596 966 aa20.22■□□□□ 0.83
SNX30-201ENST00000374232 SENP3Q9H4L4 574 aaPredicted RBP20.19■□□□□ 0.82
SNX30-201ENST00000374232 FKBP8Q14318 412 aa20.11■□□□□ 0.81
SNX30-201ENST00000374232 PABPN1Q86U42 306 aaKnown RBP eCLIP20.09■□□□□ 0.81
SNX30-201ENST00000374232 ANP32AP39687 249 aaKnown RBP20.09■□□□□ 0.81
SNX30-201ENST00000374232 SENP3-EIF4A1A0A087X0R7 540 aa20.09■□□□□ 0.81
SNX30-201ENST00000374232 NEFMP07197 916 aa20.08■□□□□ 0.8
SNX30-201ENST00000374232 PLEKHG5O94827 1062 aa20.08■□□□□ 0.8
SNX30-201ENST00000374232 ZNF777Q9ULD5 760 aaPredicted RBP20.04■□□□□ 0.8
SNX30-201ENST00000374232 IRX6P78412 446 aaPredicted RBP20.04■□□□□ 0.8
SNX30-201ENST00000374232 HSP90AA1P07900 732 aaKnown RBP20.01■□□□□ 0.79
SNX30-201ENST00000374232 FAM9BQ8IZU0 186 aa19.99■□□□□ 0.79
SNX30-201ENST00000374232 ACIN1Q9UKV3 1341 aaKnown RBP19.99■□□□□ 0.79
SNX30-201ENST00000374232 CHGAP10645 457 aaKnown RBP19.94■□□□□ 0.78
SNX30-201ENST00000374232 A0A0G2JS52 829 aa19.92■□□□□ 0.78
SNX30-201ENST00000374232 TPRNQ4KMQ1 711 aa19.92■□□□□ 0.78
SNX30-201ENST00000374232 HIRIP3Q9BW71 556 aaPredicted RBP19.89■□□□□ 0.77
SNX30-201ENST00000374232 ANP32BQ92688 251 aaKnown RBP19.87■□□□□ 0.77
SNX30-201ENST00000374232 SCAF1Q9H7N4 1312 aaKnown RBP19.86■□□□□ 0.77
SNX30-201ENST00000374232 HNRNPUQ00839 825 aaKnown RBP eCLIP19.86■□□□□ 0.77
SNX30-201ENST00000374232 DDX10Q13206 875 aaKnown RBP19.84■□□□□ 0.77
SNX30-201ENST00000374232 STAG3Q9UJ98 1225 aa19.78■□□□□ 0.76
SNX30-201ENST00000374232 ZBTB7CA1YPR0 619 aa19.76■□□□□ 0.75
SNX30-201ENST00000374232 TULP1O00294 542 aaPredicted RBP19.75■□□□□ 0.75
SNX30-201ENST00000374232 ESF1Q9H501 851 aaKnown RBP19.75■□□□□ 0.75
SNX30-201ENST00000374232 TAOK2Q9UL54 1235 aa19.7■□□□□ 0.74
SNX30-201ENST00000374232 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.7■□□□□ 0.749e-6■■■□□ 18.9
SNX30-201ENST00000374232 RTN4Q9NQC3 1192 aaKnown RBP19.68■□□□□ 0.74
SNX30-201ENST00000374232 CHIC2Q9UKJ5 165 aa19.67■□□□□ 0.74
SNX30-201ENST00000374232 KDM2AQ9Y2K7 1162 aa19.67■□□□□ 0.74
SNX30-201ENST00000374232 CCDC136Q96JN2 1154 aa19.64■□□□□ 0.73
SNX30-201ENST00000374232 UPF2Q9HAU5 1272 aaKnown RBP19.63■□□□□ 0.73
SNX30-201ENST00000374232 CDK11BP21127 795 aaKnown RBP19.6■□□□□ 0.73
SNX30-201ENST00000374232 AMER1Q5JTC6 1135 aaPredicted RBP19.53■□□□□ 0.72
SNX30-201ENST00000374232 TMC1Q8TDI8 760 aa19.53■□□□□ 0.72
SNX30-201ENST00000374232 ABCC9O60706 1549 aa19.51■□□□□ 0.71
SNX30-201ENST00000374232 NCLP19338 710 aaKnown RBP19.49■□□□□ 0.71
SNX30-201ENST00000374232 GLIPR1L2Q4G1C9 344 aa19.48■□□□□ 0.71
SNX30-201ENST00000374232 TONSLQ96HA7 1378 aa19.48■□□□□ 0.71
SNX30-201ENST00000374232 C14orf37Q86TY3 774 aa19.47■□□□□ 0.71
SNX30-201ENST00000374232 MIER1Q8N108 512 aa19.47■□□□□ 0.71
SNX30-201ENST00000374232 NCBP3Q53F19 620 aaKnown RBP19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms