RNA–Protein interactions for RNA: ENST00000539345.6

TBCD-202, Transcript of tubulin folding cofactor D, humanhuman

TSL 5 BASIC

Gene TBCD, Length 3,975 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBCD-202ENST00000539345 NISCHQ9Y2I1 1504 aa30.23■■■□□ 2.43
TBCD-202ENST00000539345 SHROOM4Q9ULL8 1493 aa26.48■■□□□ 1.83
TBCD-202ENST00000539345 SUPT5HO00267 1087 aaKnown RBP26.24■■□□□ 1.79
TBCD-202ENST00000539345 HRCP23327 699 aa25.75■■□□□ 1.71
TBCD-202ENST00000539345 ZCCHC6Q5VYS8 1495 aaKnown RBP25.64■■□□□ 1.69
TBCD-202ENST00000539345 CHIC1Q5VXU3 224 aa25.63■■□□□ 1.69
TBCD-202ENST00000539345 MYO15BQ96JP2 1530 aa25.62■■□□□ 1.69
TBCD-202ENST00000539345 PCGF6Q9BYE7 350 aa25.49■■□□□ 1.67
TBCD-202ENST00000539345 DCAF8L2P0C7V8 631 aa25.33■■□□□ 1.65
TBCD-202ENST00000539345 CCDC180Q9P1Z9 1646 aa25.27■■□□□ 1.64
TBCD-202ENST00000539345 PPARGC1BQ86YN6 1023 aaKnown RBP25.25■■□□□ 1.63
TBCD-202ENST00000539345 LOC105371045A0A1W2PR82 267 aa25.01■■□□□ 1.59
TBCD-202ENST00000539345 DCAF1Q9Y4B6 1507 aa24.98■■□□□ 1.59
TBCD-202ENST00000539345 TRIM26Q12899 539 aaPredicted RBP24.78■■□□□ 1.56
TBCD-202ENST00000539345 ZEB1P37275 1124 aaPredicted RBP24.43■■□□□ 1.5
TBCD-202ENST00000539345 TRIM41Q8WV44 630 aa24.32■■□□□ 1.48
TBCD-202ENST00000539345 FAM9AQ8IZU1 332 aaPredicted RBP24.27■■□□□ 1.48
TBCD-202ENST00000539345 ABCC9O60706 1549 aa24.26■■□□□ 1.47
TBCD-202ENST00000539345 RSF1Q96T23 1441 aaPredicted RBP24.2■■□□□ 1.46
TBCD-202ENST00000539345 EHMT2Q96KQ7 1210 aa24.16■■□□□ 1.46
TBCD-202ENST00000539345 PELP1Q8IZL8 1130 aaKnown RBP24.16■■□□□ 1.46
TBCD-202ENST00000539345 SCAF1Q9H7N4 1312 aaKnown RBP24.1■■□□□ 1.45
TBCD-202ENST00000539345 SCRIBQ14160 1630 aa24.02■■□□□ 1.44
TBCD-202ENST00000539345 RB1CC1Q8TDY2 1594 aa24■■□□□ 1.43
TBCD-202ENST00000539345 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.78■■□□□ 1.4
TBCD-202ENST00000539345 CCER1Q8TC90 406 aaPredicted RBP23.75■■□□□ 1.39
TBCD-202ENST00000539345 ACIN1Q9UKV3 1341 aaKnown RBP23.67■■□□□ 1.38
TBCD-202ENST00000539345 CECR2Q9BXF3 1484 aa23.66■■□□□ 1.38
TBCD-202ENST00000539345 NEUROD1Q13562 356 aa23.63■■□□□ 1.37
TBCD-202ENST00000539345 MROH2BQ7Z745 1585 aa23.59■■□□□ 1.37
TBCD-202ENST00000539345 DIEXFQ68CQ4 756 aaKnown RBP23.54■■□□□ 1.36
TBCD-202ENST00000539345 TTBK1Q5TCY1 1321 aaPredicted RBP23.5■■□□□ 1.35
TBCD-202ENST00000539345 GTF3C3Q9Y5Q9 886 aa23.47■■□□□ 1.35
TBCD-202ENST00000539345 WIZO95785 1651 aa23.47■■□□□ 1.35
TBCD-202ENST00000539345 CENPBP07199 599 aaPredicted RBP23.47■■□□□ 1.35
TBCD-202ENST00000539345 NACADO15069 1562 aa23.34■■□□□ 1.33
TBCD-202ENST00000539345 BAZ1AQ9NRL2 1556 aaPredicted RBP23.27■■□□□ 1.32
TBCD-202ENST00000539345 WRNQ14191 1432 aaPredicted RBP eCLIP23.26■■□□□ 1.319e-6■■■■■ 50.1
TBCD-202ENST00000539345 EIF4G1Q04637 1599 aaKnown RBP23.24■■□□□ 1.31
TBCD-202ENST00000539345 CEP162Q5TB80 1403 aa23.24■■□□□ 1.31
TBCD-202ENST00000539345 CCDC88BA6NC98 1476 aa23.22■■□□□ 1.31
TBCD-202ENST00000539345 ABCC8Q09428 1581 aa23.2■■□□□ 1.3
TBCD-202ENST00000539345 ZNF316A6NFI3 1004 aaPredicted RBP23.19■■□□□ 1.3
TBCD-202ENST00000539345 UBTFP17480 764 aaKnown RBP23.14■■□□□ 1.29
TBCD-202ENST00000539345 SOGA1O94964 1423 aa23.13■■□□□ 1.29
TBCD-202ENST00000539345 TNIKQ9UKE5 1360 aa23.13■■□□□ 1.29
TBCD-202ENST00000539345 YTHDC1Q96MU7 727 aaKnown RBP23.13■■□□□ 1.29
TBCD-202ENST00000539345 CSRNP3Q8WYN3 585 aa23.08■■□□□ 1.28
TBCD-202ENST00000539345 MYT1Q01538 1121 aa23.07■■□□□ 1.28
TBCD-202ENST00000539345 TOP2AP11388 1531 aaKnown RBP23.04■■□□□ 1.28
TBCD-202ENST00000539345 RUSC2Q8N2Y8 1516 aa22.99■■□□□ 1.27
TBCD-202ENST00000539345 MIER1Q8N108 512 aa22.98■■□□□ 1.27
TBCD-202ENST00000539345 HNRNPUL2Q1KMD3 747 aaKnown RBP22.97■■□□□ 1.27
TBCD-202ENST00000539345 EEA1Q15075 1411 aa22.96■■□□□ 1.27
TBCD-202ENST00000539345 SMARCA2P51531 1590 aa22.95■■□□□ 1.26
TBCD-202ENST00000539345 GOLGA3Q08378 1498 aa22.89■■□□□ 1.25
TBCD-202ENST00000539345 SMARCA4P51532 1647 aa22.88■■□□□ 1.25
TBCD-202ENST00000539345 APLP2Q06481 763 aa22.73■■□□□ 1.23
TBCD-202ENST00000539345 CLIP1P30622 1438 aa22.71■■□□□ 1.23
TBCD-202ENST00000539345 CEP164Q9UPV0 1460 aa22.69■■□□□ 1.22
TBCD-202ENST00000539345 RANGAP1P46060 587 aaPredicted RBP22.67■■□□□ 1.22
TBCD-202ENST00000539345 VPS8Q8N3P4 1428 aa22.63■■□□□ 1.21
TBCD-202ENST00000539345 KIF21BO75037 1637 aa22.57■■□□□ 1.2
TBCD-202ENST00000539345 SYNJ1O43426 1573 aa22.54■■□□□ 1.2
TBCD-202ENST00000539345 PABPN1Q86U42 306 aaKnown RBP eCLIP22.53■■□□□ 1.25e-7■■■■□ 19.8
TBCD-202ENST00000539345 RAPGEF2Q9Y4G8 1499 aa22.51■■□□□ 1.19
TBCD-202ENST00000539345 UNC13AQ9UPW8 1703 aa22.49■■□□□ 1.19
TBCD-202ENST00000539345 BAZ1BQ9UIG0 1483 aaKnown RBP22.47■■□□□ 1.19
TBCD-202ENST00000539345 CLSPNQ9HAW4 1339 aa22.44■■□□□ 1.18
TBCD-202ENST00000539345 SUPT16HQ9Y5B9 1047 aaKnown RBP22.44■■□□□ 1.18
TBCD-202ENST00000539345 DHX57Q6P158 1386 aaKnown RBP22.43■■□□□ 1.18
TBCD-202ENST00000539345 KANK4Q5T7N3 995 aaPredicted RBP22.33■■□□□ 1.16
TBCD-202ENST00000539345 PEG3Q9GZU2 1588 aa22.32■■□□□ 1.16
TBCD-202ENST00000539345 BICRAQ9NZM4 1560 aa22.25■■□□□ 1.15
TBCD-202ENST00000539345 ATAD2BQ9ULI0 1458 aa22.23■■□□□ 1.15
TBCD-202ENST00000539345 ARAP1Q96P48 1450 aa22.22■■□□□ 1.15
TBCD-202ENST00000539345 TSHZ2Q9NRE2 1034 aa22.21■■□□□ 1.15
TBCD-202ENST00000539345 ITGAEP38570 1179 aa22.21■■□□□ 1.15
TBCD-202ENST00000539345 TOP2BQ02880 1626 aa22.16■■□□□ 1.14
TBCD-202ENST00000539345 KCNH8Q96L42 1107 aa22.15■■□□□ 1.14
TBCD-202ENST00000539345 RRBP1Q9P2E9 1410 aaKnown RBP22.15■■□□□ 1.14
TBCD-202ENST00000539345 PRXQ9BXM0 1461 aa22.15■■□□□ 1.14
TBCD-202ENST00000539345 ERICH3Q5RHP9 1530 aa22.13■■□□□ 1.13
TBCD-202ENST00000539345 CCNB3Q8WWL7 1395 aa22.11■■□□□ 1.13
TBCD-202ENST00000539345 BCANQ96GW7 911 aa22.06■■□□□ 1.12
TBCD-202ENST00000539345 CUX2O14529 1486 aa22.05■■□□□ 1.12
TBCD-202ENST00000539345 ANP32EQ9BTT0 268 aa22.04■■□□□ 1.12
TBCD-202ENST00000539345 BIVM-ERCC5R4GMW8 1640 aa22.02■■□□□ 1.11
TBCD-202ENST00000539345 RAB3GAP2Q9H2M9 1393 aa22.01■■□□□ 1.11
TBCD-202ENST00000539345 DDX10Q13206 875 aaKnown RBP21.99■■□□□ 1.11
TBCD-202ENST00000539345 FKBP8Q14318 412 aa21.98■■□□□ 1.11
TBCD-202ENST00000539345 KIF27Q86VH2 1401 aa21.98■■□□□ 1.11
TBCD-202ENST00000539345 ARHGAP35Q9NRY4 1499 aa21.95■■□□□ 1.1
TBCD-202ENST00000539345 MAPKBP1O60336 1514 aa21.92■■□□□ 1.1
TBCD-202ENST00000539345 SIN3AQ96ST3 1273 aa21.91■■□□□ 1.1
TBCD-202ENST00000539345 CUX1P39880 1505 aa21.9■■□□□ 1.1
TBCD-202ENST00000539345 SETD5Q9C0A6 1442 aa21.87■■□□□ 1.09
TBCD-202ENST00000539345 FAM50AQ14320 339 aaKnown RBP21.85■■□□□ 1.09
TBCD-202ENST00000539345 NEFLP07196 543 aa21.84■■□□□ 1.09
TBCD-202ENST00000539345 HIRIP3Q9BW71 556 aaPredicted RBP21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms