Protein–RNA interactions for Protein: P23368

ME2, NAD-dependent malic enzyme, mitochondrial, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ME2P23368 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
ME2P23368 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.06■□□□□ 0.16
ME2P23368 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ME2P23368 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ME2P23368 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
ME2P23368 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ME2P23368 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
ME2P23368 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.06■□□□□ 0.16
ME2P23368 AP005117.1-202ENST00000581724 1908 ntBASIC16.06■□□□□ 0.16
ME2P23368 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
ME2P23368 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ME2P23368 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
ME2P23368 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ME2P23368 AC006449.6-201ENST00000612330 2296 ntBASIC16.05■□□□□ 0.16
ME2P23368 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
ME2P23368 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ME2P23368 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ME2P23368 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ME2P23368 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
ME2P23368 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ME2P23368 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
ME2P23368 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ME2P23368 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.05■□□□□ 0.16
ME2P23368 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ME2P23368 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.05■□□□□ 0.16
ME2P23368 POM121L3P-201ENST00000419331 1163 ntBASIC16.05■□□□□ 0.16
ME2P23368 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.05■□□□□ 0.16
ME2P23368 NUS1P1-201ENST00000446295 882 ntBASIC16.05■□□□□ 0.16
ME2P23368 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ME2P23368 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.05■□□□□ 0.16
ME2P23368 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.05■□□□□ 0.16
ME2P23368 AP005901.3-202ENST00000581653 237 ntBASIC16.05■□□□□ 0.16
ME2P23368 AC005336.2-201ENST00000593183 939 ntBASIC16.05■□□□□ 0.16
ME2P23368 AC138894.3-201ENST00000603787 634 ntBASIC16.05■□□□□ 0.16
ME2P23368 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
ME2P23368 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.05■□□□□ 0.16
ME2P23368 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.05■□□□□ 0.16
ME2P23368 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.05■□□□□ 0.16
ME2P23368 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ME2P23368 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.05■□□□□ 0.16
ME2P23368 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ME2P23368 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.05■□□□□ 0.16
ME2P23368 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.04■□□□□ 0.16
ME2P23368 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
ME2P23368 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.04■□□□□ 0.16
ME2P23368 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ME2P23368 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.04■□□□□ 0.16
ME2P23368 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ME2P23368 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.04■□□□□ 0.16
ME2P23368 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ME2P23368 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ME2P23368 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
ME2P23368 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ME2P23368 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
ME2P23368 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.04■□□□□ 0.16
ME2P23368 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ME2P23368 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
ME2P23368 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.04■□□□□ 0.16
ME2P23368 FAM220CP-201ENST00000395253 831 ntBASIC16.04■□□□□ 0.16
ME2P23368 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.04■□□□□ 0.16
ME2P23368 IGHV3-47-201ENST00000425060 335 ntBASIC16.04■□□□□ 0.16
ME2P23368 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ME2P23368 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.04■□□□□ 0.16
ME2P23368 AC091607.1-201ENST00000490318 1060 ntBASIC16.04■□□□□ 0.16
ME2P23368 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.04■□□□□ 0.16
ME2P23368 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.04■□□□□ 0.16
ME2P23368 AL121772.3-201ENST00000610840 674 ntBASIC16.04■□□□□ 0.16
ME2P23368 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.04■□□□□ 0.16
ME2P23368 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ME2P23368 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ME2P23368 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
ME2P23368 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ME2P23368 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
ME2P23368 GGT3P-204ENST00000453783 1664 ntBASIC16.04■□□□□ 0.16
ME2P23368 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ME2P23368 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.04■□□□□ 0.16
ME2P23368 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.04■□□□□ 0.16
ME2P23368 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
ME2P23368 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ME2P23368 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.04■□□□□ 0.16
ME2P23368 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ME2P23368 AC068587.6-202ENST00000641839 5619 ntBASIC16.03■□□□□ 0.16
ME2P23368 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.03■□□□□ 0.16
ME2P23368 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ME2P23368 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ME2P23368 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ME2P23368 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.03■□□□□ 0.16
ME2P23368 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ME2P23368 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ME2P23368 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
ME2P23368 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ME2P23368 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.03■□□□□ 0.16
ME2P23368 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ME2P23368 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ME2P23368 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ME2P23368 AC003669.1-201ENST00000334569 611 ntBASIC16.03■□□□□ 0.16
ME2P23368 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.03■□□□□ 0.16
ME2P23368 NUS1P2-201ENST00000417358 873 ntBASIC16.03■□□□□ 0.16
ME2P23368 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.03■□□□□ 0.16
ME2P23368 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms