RNA–Protein interactions for RNA: ENST00000254488.6

SLC6A11-201, Transcript of solute carrier family 6 member 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A11, Length 4,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A11-201ENST00000254488 NISCHQ9Y2I1 1504 aa27.78■■■□□ 2.04
SLC6A11-201ENST00000254488 DCAF8L2P0C7V8 631 aa26.48■■□□□ 1.83
SLC6A11-201ENST00000254488 SUPT5HO00267 1087 aaKnown RBP26.04■■□□□ 1.76
SLC6A11-201ENST00000254488 SHROOM4Q9ULL8 1493 aa25.82■■□□□ 1.72
SLC6A11-201ENST00000254488 PCGF6Q9BYE7 350 aa25.39■■□□□ 1.65
SLC6A11-201ENST00000254488 HRCP23327 699 aa25.19■■□□□ 1.62
SLC6A11-201ENST00000254488 PPARGC1BQ86YN6 1023 aaKnown RBP24.74■■□□□ 1.55
SLC6A11-201ENST00000254488 PELP1Q8IZL8 1130 aaKnown RBP24.73■■□□□ 1.55
SLC6A11-201ENST00000254488 EHMT2Q96KQ7 1210 aa24.69■■□□□ 1.54
SLC6A11-201ENST00000254488 CHIC1Q5VXU3 224 aa24.63■■□□□ 1.53
SLC6A11-201ENST00000254488 ZEB1P37275 1124 aaPredicted RBP24.49■■□□□ 1.51
SLC6A11-201ENST00000254488 TRIM26Q12899 539 aaPredicted RBP24.38■■□□□ 1.49
SLC6A11-201ENST00000254488 LOC105371045A0A1W2PR82 267 aa24.33■■□□□ 1.49
SLC6A11-201ENST00000254488 FAM9AQ8IZU1 332 aaPredicted RBP24.3■■□□□ 1.48
SLC6A11-201ENST00000254488 CENPBP07199 599 aaPredicted RBP24.06■■□□□ 1.44
SLC6A11-201ENST00000254488 TRIM41Q8WV44 630 aa24.04■■□□□ 1.44
SLC6A11-201ENST00000254488 CCER1Q8TC90 406 aaPredicted RBP23.97■■□□□ 1.43
SLC6A11-201ENST00000254488 MYT1Q01538 1121 aa23.94■■□□□ 1.42
SLC6A11-201ENST00000254488 TTBK1Q5TCY1 1321 aaPredicted RBP23.83■■□□□ 1.41
SLC6A11-201ENST00000254488 MYO15BQ96JP2 1530 aa23.82■■□□□ 1.4
SLC6A11-201ENST00000254488 DCAF1Q9Y4B6 1507 aa23.67■■□□□ 1.38
SLC6A11-201ENST00000254488 YTHDC1Q96MU7 727 aaKnown RBP23.61■■□□□ 1.37
SLC6A11-201ENST00000254488 SCAF1Q9H7N4 1312 aaKnown RBP23.54■■□□□ 1.36
SLC6A11-201ENST00000254488 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.52■■□□□ 1.36
SLC6A11-201ENST00000254488 GTF3C3Q9Y5Q9 886 aa23.47■■□□□ 1.35
SLC6A11-201ENST00000254488 DIEXFQ68CQ4 756 aaKnown RBP23.47■■□□□ 1.35
SLC6A11-201ENST00000254488 ACIN1Q9UKV3 1341 aaKnown RBP23.43■■□□□ 1.34
SLC6A11-201ENST00000254488 RANGAP1P46060 587 aaPredicted RBP23.41■■□□□ 1.34
SLC6A11-201ENST00000254488 ZCCHC6Q5VYS8 1495 aaKnown RBP23.37■■□□□ 1.33
SLC6A11-201ENST00000254488 APLP2Q06481 763 aa23.32■■□□□ 1.32
SLC6A11-201ENST00000254488 NEUROD1Q13562 356 aa23.22■■□□□ 1.31
SLC6A11-201ENST00000254488 UBTFP17480 764 aaKnown RBP23.19■■□□□ 1.3
SLC6A11-201ENST00000254488 CCDC180Q9P1Z9 1646 aa23.09■■□□□ 1.29
SLC6A11-201ENST00000254488 HNRNPUL2Q1KMD3 747 aaKnown RBP22.96■■□□□ 1.27
SLC6A11-201ENST00000254488 ZNF316A6NFI3 1004 aaPredicted RBP22.94■■□□□ 1.26
SLC6A11-201ENST00000254488 ATP1B4Q9UN42 357 aaPredicted RBP22.84■■□□□ 1.25
SLC6A11-201ENST00000254488 NEFLP07196 543 aa22.71■■□□□ 1.23
SLC6A11-201ENST00000254488 ERICH6Q7L0X2 663 aa22.69■■□□□ 1.22
SLC6A11-201ENST00000254488 MIER1Q8N108 512 aa22.55■■□□□ 1.2
SLC6A11-201ENST00000254488 ABCC9O60706 1549 aa22.52■■□□□ 1.2
SLC6A11-201ENST00000254488 RSF1Q96T23 1441 aaPredicted RBP22.48■■□□□ 1.19
SLC6A11-201ENST00000254488 BCANQ96GW7 911 aa22.45■■□□□ 1.18
SLC6A11-201ENST00000254488 ITGAEP38570 1179 aa22.45■■□□□ 1.18
SLC6A11-201ENST00000254488 CSRNP3Q8WYN3 585 aa22.39■■□□□ 1.17
SLC6A11-201ENST00000254488 SCRIBQ14160 1630 aa22.34■■□□□ 1.17
SLC6A11-201ENST00000254488 CLSPNQ9HAW4 1339 aa22.32■■□□□ 1.16
SLC6A11-201ENST00000254488 CEP162Q5TB80 1403 aa22.16■■□□□ 1.14
SLC6A11-201ENST00000254488 FKBP8Q14318 412 aa22.11■■□□□ 1.13
SLC6A11-201ENST00000254488 RB1CC1Q8TDY2 1594 aa22.11■■□□□ 1.13
SLC6A11-201ENST00000254488 PABPN1Q86U42 306 aaKnown RBP eCLIP22.08■■□□□ 1.13
SLC6A11-201ENST00000254488 ANP32EQ9BTT0 268 aa22.07■■□□□ 1.12
SLC6A11-201ENST00000254488 SUPT16HQ9Y5B9 1047 aaKnown RBP22.05■■□□□ 1.12
SLC6A11-201ENST00000254488 CNGB1Q14028 1251 aaPredicted RBP22■■□□□ 1.11
SLC6A11-201ENST00000254488 TNIKQ9UKE5 1360 aa21.98■■□□□ 1.11
SLC6A11-201ENST00000254488 ANP32CO43423 234 aa21.97■■□□□ 1.11
SLC6A11-201ENST00000254488 CDK11AQ9UQ88 783 aaPredicted RBP21.93■■□□□ 1.1
SLC6A11-201ENST00000254488 DDX10Q13206 875 aaKnown RBP21.91■■□□□ 1.1
SLC6A11-201ENST00000254488 FAM50AQ14320 339 aaKnown RBP21.89■■□□□ 1.1
SLC6A11-201ENST00000254488 CECR2Q9BXF3 1484 aa21.86■■□□□ 1.09
SLC6A11-201ENST00000254488 CLIP1P30622 1438 aa21.86■■□□□ 1.09
SLC6A11-201ENST00000254488 POLR3GLQ9BT43 218 aa21.85■■□□□ 1.09
SLC6A11-201ENST00000254488 EEA1Q15075 1411 aa21.82■■□□□ 1.08
SLC6A11-201ENST00000254488 TRIM52Q96A61 297 aa21.82■■□□□ 1.08
SLC6A11-201ENST00000254488 GOLGA3Q08378 1498 aa21.82■■□□□ 1.08
SLC6A11-201ENST00000254488 BCL11AQ9H165 835 aa21.8■■□□□ 1.08
SLC6A11-201ENST00000254488 TSHZ2Q9NRE2 1034 aa21.79■■□□□ 1.08
SLC6A11-201ENST00000254488 SOGA1O94964 1423 aa21.78■■□□□ 1.08
SLC6A11-201ENST00000254488 WRNQ14191 1432 aaPredicted RBP eCLIP21.72■■□□□ 1.07
SLC6A11-201ENST00000254488 RTL5Q5HYW3 569 aaPredicted RBP21.72■■□□□ 1.07
SLC6A11-201ENST00000254488 MROH2BQ7Z745 1585 aa21.69■■□□□ 1.06
SLC6A11-201ENST00000254488 CCDC88BA6NC98 1476 aa21.68■■□□□ 1.06
SLC6A11-201ENST00000254488 MYT1LQ9UL68 1186 aa21.65■■□□□ 1.06
SLC6A11-201ENST00000254488 HNRNPUQ00839 825 aaKnown RBP eCLIP21.64■■□□□ 1.05
SLC6A11-201ENST00000254488 HIRIP3Q9BW71 556 aaPredicted RBP21.64■■□□□ 1.05
SLC6A11-201ENST00000254488 ABCC8Q09428 1581 aa21.62■■□□□ 1.05
SLC6A11-201ENST00000254488 IRX6P78412 446 aaPredicted RBP21.58■■□□□ 1.05
SLC6A11-201ENST00000254488 CEP164Q9UPV0 1460 aa21.58■■□□□ 1.04
SLC6A11-201ENST00000254488 RBM19Q9Y4C8 960 aaKnown RBP21.58■■□□□ 1.04
SLC6A11-201ENST00000254488 VPS8Q8N3P4 1428 aa21.49■■□□□ 1.03
SLC6A11-201ENST00000254488 WIZO95785 1651 aa21.48■■□□□ 1.03
SLC6A11-201ENST00000254488 TONSLQ96HA7 1378 aa21.47■■□□□ 1.03
SLC6A11-201ENST00000254488 P3H3Q8IVL6 736 aa21.46■■□□□ 1.03
SLC6A11-201ENST00000254488 BAZ1AQ9NRL2 1556 aaPredicted RBP21.45■■□□□ 1.03
SLC6A11-201ENST00000254488 KCNH8Q96L42 1107 aa21.45■■□□□ 1.02
SLC6A11-201ENST00000254488 DAXXQ9UER7 740 aaPredicted RBP21.43■■□□□ 1.02
SLC6A11-201ENST00000254488 NBR1Q14596 966 aa21.43■■□□□ 1.02
SLC6A11-201ENST00000254488 ANP32AP39687 249 aaKnown RBP21.41■■□□□ 1.02
SLC6A11-201ENST00000254488 SIN3AQ96ST3 1273 aa21.41■■□□□ 1.02
SLC6A11-201ENST00000254488 ARID3CA6NKF2 412 aa21.39■■□□□ 1.01
SLC6A11-201ENST00000254488 RUSC2Q8N2Y8 1516 aa21.39■■□□□ 1.01
SLC6A11-201ENST00000254488 NACADO15069 1562 aa21.39■■□□□ 1.01
SLC6A11-201ENST00000254488 FAM9BQ8IZU0 186 aa21.38■■□□□ 1.01
SLC6A11-201ENST00000254488 DHX57Q6P158 1386 aaKnown RBP21.36■■□□□ 1.01
SLC6A11-201ENST00000254488 KANK4Q5T7N3 995 aaPredicted RBP21.36■■□□□ 1.01
SLC6A11-201ENST00000254488 CCNB3Q8WWL7 1395 aa21.31■■□□□ 1
SLC6A11-201ENST00000254488 CCER2I3L3R5 266 aa21.27■■□□□ 1
SLC6A11-201ENST00000254488 NPM2Q86SE8 214 aaKnown RBP21.26■□□□□ 0.99
SLC6A11-201ENST00000254488 FBLN2P98095 1184 aa21.26■□□□□ 0.99
SLC6A11-201ENST00000254488 MRS2Q9HD23 443 aa21.23■□□□□ 0.99
SLC6A11-201ENST00000254488 ZBTB47Q9UFB7 747 aaPredicted RBP21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms