RNA–Protein interactions for RNA: ENST00000510769.5

NEK11-210, Transcript of NIMA related kinase 11, humanhuman

TSL 2 BASIC

Gene NEK11, Length 2,149 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK11-210ENST00000510769 NISCHQ9Y2I1 1504 aa33.01■■■□□ 2.87
NEK11-210ENST00000510769 CCDC180Q9P1Z9 1646 aa28.25■■■□□ 2.11
NEK11-210ENST00000510769 ZCCHC6Q5VYS8 1495 aaKnown RBP27.96■■■□□ 2.07
NEK11-210ENST00000510769 SHROOM4Q9ULL8 1493 aa27.89■■■□□ 2.06
NEK11-210ENST00000510769 SUPT5HO00267 1087 aaKnown RBP27.35■■□□□ 1.97
NEK11-210ENST00000510769 DCAF1Q9Y4B6 1507 aa27.21■■□□□ 1.95
NEK11-210ENST00000510769 DCAF8L2P0C7V8 631 aa27.09■■□□□ 1.93
NEK11-210ENST00000510769 CHIC1Q5VXU3 224 aa26.65■■□□□ 1.86
NEK11-210ENST00000510769 MYO15BQ96JP2 1530 aa26.55■■□□□ 1.84
NEK11-210ENST00000510769 ABCC9O60706 1549 aa26.43■■□□□ 1.82
NEK11-210ENST00000510769 SCRIBQ14160 1630 aa26.28■■□□□ 1.8
NEK11-210ENST00000510769 NACADO15069 1562 aa26.05■■□□□ 1.76
NEK11-210ENST00000510769 RSF1Q96T23 1441 aaPredicted RBP26.04■■□□□ 1.76
NEK11-210ENST00000510769 RB1CC1Q8TDY2 1594 aa25.88■■□□□ 1.73
NEK11-210ENST00000510769 HRCP23327 699 aa25.88■■□□□ 1.73
NEK11-210ENST00000510769 PCGF6Q9BYE7 350 aa25.78■■□□□ 1.72
NEK11-210ENST00000510769 LOC105371045A0A1W2PR82 267 aa25.74■■□□□ 1.71
NEK11-210ENST00000510769 CECR2Q9BXF3 1484 aa25.61■■□□□ 1.69
NEK11-210ENST00000510769 MROH2BQ7Z745 1585 aa25.59■■□□□ 1.69
NEK11-210ENST00000510769 TRIM41Q8WV44 630 aa25.58■■□□□ 1.69
NEK11-210ENST00000510769 WIZO95785 1651 aa25.47■■□□□ 1.67
NEK11-210ENST00000510769 BAZ1AQ9NRL2 1556 aaPredicted RBP25.45■■□□□ 1.66
NEK11-210ENST00000510769 TRIM26Q12899 539 aaPredicted RBP25.43■■□□□ 1.66
NEK11-210ENST00000510769 FAM9AQ8IZU1 332 aaPredicted RBP25.23■■□□□ 1.63
NEK11-210ENST00000510769 EIF4G1Q04637 1599 aaKnown RBP25.22■■□□□ 1.63
NEK11-210ENST00000510769 UNC13AQ9UPW8 1703 aa25.19■■□□□ 1.62
NEK11-210ENST00000510769 TOP2AP11388 1531 aaKnown RBP25.19■■□□□ 1.62
NEK11-210ENST00000510769 SMARCA4P51532 1647 aa25.18■■□□□ 1.62
NEK11-210ENST00000510769 PPARGC1BQ86YN6 1023 aaKnown RBP25.15■■□□□ 1.62
NEK11-210ENST00000510769 SMARCA2P51531 1590 aa24.99■■□□□ 1.59
NEK11-210ENST00000510769 ZEB1P37275 1124 aaPredicted RBP24.98■■□□□ 1.59
NEK11-210ENST00000510769 CCDC88BA6NC98 1476 aa24.95■■□□□ 1.58
NEK11-210ENST00000510769 EHMT2Q96KQ7 1210 aa24.92■■□□□ 1.58
NEK11-210ENST00000510769 ABCC8Q09428 1581 aa24.86■■□□□ 1.57
NEK11-210ENST00000510769 BICRAQ9NZM4 1560 aa24.81■■□□□ 1.56
NEK11-210ENST00000510769 PEG3Q9GZU2 1588 aa24.75■■□□□ 1.55
NEK11-210ENST00000510769 EEA1Q15075 1411 aa24.7■■□□□ 1.54
NEK11-210ENST00000510769 PABPN1Q86U42 306 aaKnown RBP eCLIP24.63■■□□□ 1.53
NEK11-210ENST00000510769 WRNQ14191 1432 aaPredicted RBP eCLIP24.61■■□□□ 1.53
NEK11-210ENST00000510769 SOGA1O94964 1423 aa24.58■■□□□ 1.53
NEK11-210ENST00000510769 CEP162Q5TB80 1403 aa24.57■■□□□ 1.52
NEK11-210ENST00000510769 TNIKQ9UKE5 1360 aa24.56■■□□□ 1.52
NEK11-210ENST00000510769 CSRNP3Q8WYN3 585 aa24.48■■□□□ 1.51
NEK11-210ENST00000510769 GOLGA3Q08378 1498 aa24.47■■□□□ 1.51
NEK11-210ENST00000510769 ATAD2BQ9ULI0 1458 aa24.47■■□□□ 1.51
NEK11-210ENST00000510769 BAZ1BQ9UIG0 1483 aaKnown RBP24.45■■□□□ 1.5
NEK11-210ENST00000510769 RUSC2Q8N2Y8 1516 aa24.42■■□□□ 1.5
NEK11-210ENST00000510769 SYNJ1O43426 1573 aa24.39■■□□□ 1.49
NEK11-210ENST00000510769 UBTFP17480 764 aaKnown RBP24.35■■□□□ 1.49
NEK11-210ENST00000510769 KIF21BO75037 1637 aa24.35■■□□□ 1.49
NEK11-210ENST00000510769 CEP164Q9UPV0 1460 aa24.33■■□□□ 1.49
NEK11-210ENST00000510769 CCER1Q8TC90 406 aaPredicted RBP24.31■■□□□ 1.48
NEK11-210ENST00000510769 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.27■■□□□ 1.48
NEK11-210ENST00000510769 TOP2BQ02880 1626 aa24.17■■□□□ 1.46
NEK11-210ENST00000510769 TTBK1Q5TCY1 1321 aaPredicted RBP24.17■■□□□ 1.46
NEK11-210ENST00000510769 CLIP1P30622 1438 aa24.12■■□□□ 1.45
NEK11-210ENST00000510769 HMGXB3Q12766 1538 aa24.12■■□□□ 1.45
NEK11-210ENST00000510769 BIVM-ERCC5R4GMW8 1640 aa24.12■■□□□ 1.45
NEK11-210ENST00000510769 VPS8Q8N3P4 1428 aa24.05■■□□□ 1.44
NEK11-210ENST00000510769 RAPGEF2Q9Y4G8 1499 aa24.04■■□□□ 1.44
NEK11-210ENST00000510769 NCAPD3P42695 1498 aa24.02■■□□□ 1.44
NEK11-210ENST00000510769 ERICH3Q5RHP9 1530 aa23.97■■□□□ 1.43
NEK11-210ENST00000510769 APLP2Q06481 763 aa23.92■■□□□ 1.42
NEK11-210ENST00000510769 PRXQ9BXM0 1461 aa23.87■■□□□ 1.41
NEK11-210ENST00000510769 CUX1P39880 1505 aa23.85■■□□□ 1.41
NEK11-210ENST00000510769 CFTRP13569 1480 aa23.83■■□□□ 1.4
NEK11-210ENST00000510769 DIEXFQ68CQ4 756 aaKnown RBP23.82■■□□□ 1.4
NEK11-210ENST00000510769 PRDM2Q13029 1718 aa23.82■■□□□ 1.4
NEK11-210ENST00000510769 KIF27Q86VH2 1401 aa23.8■■□□□ 1.4
NEK11-210ENST00000510769 HNRNPUL2Q1KMD3 747 aaKnown RBP23.75■■□□□ 1.39
NEK11-210ENST00000510769 SCAF1Q9H7N4 1312 aaKnown RBP23.74■■□□□ 1.39
NEK11-210ENST00000510769 ARAP1Q96P48 1450 aa23.73■■□□□ 1.39
NEK11-210ENST00000510769 RANGAP1P46060 587 aaPredicted RBP23.72■■□□□ 1.39
NEK11-210ENST00000510769 ZNF316A6NFI3 1004 aaPredicted RBP23.68■■□□□ 1.38
NEK11-210ENST00000510769 ACIN1Q9UKV3 1341 aaKnown RBP23.63■■□□□ 1.37
NEK11-210ENST00000510769 CENPBP07199 599 aaPredicted RBP23.62■■□□□ 1.37
NEK11-210ENST00000510769 CADPSQ9ULU8 1353 aa23.53■■□□□ 1.36
NEK11-210ENST00000510769 CUX2O14529 1486 aa23.52■■□□□ 1.35
NEK11-210ENST00000510769 ARHGAP35Q9NRY4 1499 aa23.52■■□□□ 1.35
NEK11-210ENST00000510769 CLSPNQ9HAW4 1339 aa23.51■■□□□ 1.35
NEK11-210ENST00000510769 NEUROD1Q13562 356 aa23.5■■□□□ 1.35
NEK11-210ENST00000510769 PELP1Q8IZL8 1130 aaKnown RBP23.5■■□□□ 1.35
NEK11-210ENST00000510769 RRBP1Q9P2E9 1410 aaKnown RBP23.49■■□□□ 1.35
NEK11-210ENST00000510769 KANK4Q5T7N3 995 aaPredicted RBP23.45■■□□□ 1.34
NEK11-210ENST00000510769 FGD5Q6ZNL6 1462 aa23.44■■□□□ 1.34
NEK11-210ENST00000510769 IGF1RP08069 1367 aa23.42■■□□□ 1.34
NEK11-210ENST00000510769 DHX57Q6P158 1386 aaKnown RBP23.4■■□□□ 1.34
NEK11-210ENST00000510769 CC2D2AQ9P2K1 1620 aa23.4■■□□□ 1.34
NEK11-210ENST00000510769 MAP3K1Q13233 1512 aa23.38■■□□□ 1.33
NEK11-210ENST00000510769 CARMIL1Q5VZK9 1371 aa23.37■■□□□ 1.33
NEK11-210ENST00000510769 CCNB3Q8WWL7 1395 aa23.36■■□□□ 1.33
NEK11-210ENST00000510769 TIAM1Q13009 1591 aa23.34■■□□□ 1.33
NEK11-210ENST00000510769 FANCD2Q9BXW9 1451 aa23.32■■□□□ 1.32
NEK11-210ENST00000510769 DNMBPQ6XZF7 1577 aa23.29■■□□□ 1.32
NEK11-210ENST00000510769 GTF3C3Q9Y5Q9 886 aa23.29■■□□□ 1.32
NEK11-210ENST00000510769 FHAD1B1AJZ9 1412 aa23.26■■□□□ 1.31
NEK11-210ENST00000510769 MIER1Q8N108 512 aa23.24■■□□□ 1.31
NEK11-210ENST00000510769 CFAP43Q8NDM7 1665 aa23.24■■□□□ 1.31
NEK11-210ENST00000510769 ABCA10Q8WWZ4 1543 aa23.22■■□□□ 1.31
NEK11-210ENST00000510769 LRRC9Q6ZRR7 1453 aa23.2■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms