RNA–Protein interactions for RNA: ENST00000514376.1

CTD-3080P12.3-203, humanhuman

TSL 1 (best) BASIC

Gene CTD-3080P12.3, Length 1,757 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTD-3080P12.3-203ENST00000514376 NISCHQ9Y2I1 1504 aa39.31■■■■□ 3.88
CTD-3080P12.3-203ENST00000514376 CCDC180Q9P1Z9 1646 aa34.44■■■■□ 3.1
CTD-3080P12.3-203ENST00000514376 ZCCHC6Q5VYS8 1495 aaKnown RBP32.98■■■□□ 2.87
CTD-3080P12.3-203ENST00000514376 ABCC9O60706 1549 aa32.81■■■□□ 2.84
CTD-3080P12.3-203ENST00000514376 DCAF1Q9Y4B6 1507 aa32.48■■■□□ 2.79
CTD-3080P12.3-203ENST00000514376 DCAF8L2P0C7V8 631 aa32.48■■■□□ 2.79
CTD-3080P12.3-203ENST00000514376 MYO15BQ96JP2 1530 aa32.2■■■□□ 2.75
CTD-3080P12.3-203ENST00000514376 NACADO15069 1562 aa32.11■■■□□ 2.73
CTD-3080P12.3-203ENST00000514376 RB1CC1Q8TDY2 1594 aa31.91■■■□□ 2.7
CTD-3080P12.3-203ENST00000514376 SHROOM4Q9ULL8 1493 aa31.85■■■□□ 2.69
CTD-3080P12.3-203ENST00000514376 SCRIBQ14160 1630 aa31.65■■■□□ 2.66
CTD-3080P12.3-203ENST00000514376 UNC13AQ9UPW8 1703 aa31.36■■■□□ 2.61
CTD-3080P12.3-203ENST00000514376 BICRAQ9NZM4 1560 aa31.02■■■□□ 2.56
CTD-3080P12.3-203ENST00000514376 PABPN1Q86U42 306 aaKnown RBP eCLIP30.87■■■□□ 2.53
CTD-3080P12.3-203ENST00000514376 CECR2Q9BXF3 1484 aa30.6■■■□□ 2.49
CTD-3080P12.3-203ENST00000514376 SUPT5HO00267 1087 aaKnown RBP30.46■■■□□ 2.47
CTD-3080P12.3-203ENST00000514376 MROH2BQ7Z745 1585 aa30.38■■■□□ 2.45
CTD-3080P12.3-203ENST00000514376 RSF1Q96T23 1441 aaPredicted RBP30.37■■■□□ 2.45
CTD-3080P12.3-203ENST00000514376 BAZ1AQ9NRL2 1556 aaPredicted RBP30.37■■■□□ 2.45
CTD-3080P12.3-203ENST00000514376 SMARCA4P51532 1647 aa30.31■■■□□ 2.44
CTD-3080P12.3-203ENST00000514376 WIZO95785 1651 aa30.14■■■□□ 2.42
CTD-3080P12.3-203ENST00000514376 EIF4G1Q04637 1599 aaKnown RBP30.07■■■□□ 2.4
CTD-3080P12.3-203ENST00000514376 PEG3Q9GZU2 1588 aa29.94■■■□□ 2.38
CTD-3080P12.3-203ENST00000514376 ATAD2BQ9ULI0 1458 aa29.85■■■□□ 2.37
CTD-3080P12.3-203ENST00000514376 SMARCA2P51531 1590 aa29.81■■■□□ 2.36
CTD-3080P12.3-203ENST00000514376 TOP2AP11388 1531 aaKnown RBP29.79■■■□□ 2.36
CTD-3080P12.3-203ENST00000514376 CC2D2AQ9P2K1 1620 aa29.71■■■□□ 2.35
CTD-3080P12.3-203ENST00000514376 BAZ1BQ9UIG0 1483 aaKnown RBP29.65■■■□□ 2.34
CTD-3080P12.3-203ENST00000514376 NCAPD3P42695 1498 aa29.63■■■□□ 2.33
CTD-3080P12.3-203ENST00000514376 HMGXB3Q12766 1538 aa29.58■■■□□ 2.33
CTD-3080P12.3-203ENST00000514376 CCDC88BA6NC98 1476 aa29.47■■■□□ 2.31
CTD-3080P12.3-203ENST00000514376 DNAJC5BQ9UF47 199 aa29.22■■■□□ 2.27
CTD-3080P12.3-203ENST00000514376 CHIC1Q5VXU3 224 aa29.01■■■□□ 2.23
CTD-3080P12.3-203ENST00000514376 CFTRP13569 1480 aa28.9■■■□□ 2.22
CTD-3080P12.3-203ENST00000514376 CADPSQ9ULU8 1353 aa28.83■■■□□ 2.21
CTD-3080P12.3-203ENST00000514376 PRDM2Q13029 1718 aa28.8■■■□□ 2.2
CTD-3080P12.3-203ENST00000514376 ABCC8Q09428 1581 aa28.79■■■□□ 2.2
CTD-3080P12.3-203ENST00000514376 NESP48681 1621 aa28.75■■■□□ 2.19
CTD-3080P12.3-203ENST00000514376 LAMC3Q9Y6N6 1575 aa28.68■■■□□ 2.18
CTD-3080P12.3-203ENST00000514376 TRIM41Q8WV44 630 aa28.63■■■□□ 2.17
CTD-3080P12.3-203ENST00000514376 WRNQ14191 1432 aaPredicted RBP eCLIP28.58■■■□□ 2.17
CTD-3080P12.3-203ENST00000514376 SYNJ1O43426 1573 aa28.55■■■□□ 2.16
CTD-3080P12.3-203ENST00000514376 FANCD2Q9BXW9 1451 aa28.54■■■□□ 2.16
CTD-3080P12.3-203ENST00000514376 CUX1P39880 1505 aa28.43■■■□□ 2.14
CTD-3080P12.3-203ENST00000514376 KIF21AQ7Z4S6 1674 aa28.43■■■□□ 2.14
CTD-3080P12.3-203ENST00000514376 PDS5BQ9NTI5 1447 aa28.43■■■□□ 2.14
CTD-3080P12.3-203ENST00000514376 TOP2BQ02880 1626 aa28.42■■■□□ 2.14
CTD-3080P12.3-203ENST00000514376 BIVM-ERCC5R4GMW8 1640 aa28.42■■■□□ 2.14
CTD-3080P12.3-203ENST00000514376 CEP164Q9UPV0 1460 aa28.38■■■□□ 2.13
CTD-3080P12.3-203ENST00000514376 DNMBPQ6XZF7 1577 aa28.25■■■□□ 2.11
CTD-3080P12.3-203ENST00000514376 URB2Q14146 1524 aaKnown RBP28.24■■■□□ 2.11
CTD-3080P12.3-203ENST00000514376 TOPBP1Q92547 1522 aa28.21■■■□□ 2.11
CTD-3080P12.3-203ENST00000514376 SOGA1O94964 1423 aa28.16■■■□□ 2.1
CTD-3080P12.3-203ENST00000514376 FGD5Q6ZNL6 1462 aa28.15■■■□□ 2.1
CTD-3080P12.3-203ENST00000514376 FAM9AQ8IZU1 332 aaPredicted RBP28.14■■■□□ 2.09
CTD-3080P12.3-203ENST00000514376 ERCC6Q03468 1493 aa28.13■■■□□ 2.09
CTD-3080P12.3-203ENST00000514376 MRC2Q9UBG0 1479 aa28.12■■■□□ 2.09
CTD-3080P12.3-203ENST00000514376 RUSC2Q8N2Y8 1516 aa28.1■■■□□ 2.09
CTD-3080P12.3-203ENST00000514376 POLA1P09884 1462 aaPredicted RBP28.06■■■□□ 2.08
CTD-3080P12.3-203ENST00000514376 THOC2Q8NI27 1593 aaKnown RBP28.03■■■□□ 2.08
CTD-3080P12.3-203ENST00000514376 WDR62O43379 1518 aa28.01■■■□□ 2.07
CTD-3080P12.3-203ENST00000514376 EEA1Q15075 1411 aa27.98■■■□□ 2.07
CTD-3080P12.3-203ENST00000514376 RAD54L2Q9Y4B4 1467 aa27.97■■■□□ 2.07
CTD-3080P12.3-203ENST00000514376 LOC105371045A0A1W2PR82 267 aa27.9■■■□□ 2.06
CTD-3080P12.3-203ENST00000514376 CUX2O14529 1486 aa27.89■■■□□ 2.06
CTD-3080P12.3-203ENST00000514376 WDR97A6NE52 1622 aa27.89■■■□□ 2.05
CTD-3080P12.3-203ENST00000514376 ABCA10Q8WWZ4 1543 aa27.88■■■□□ 2.05
CTD-3080P12.3-203ENST00000514376 KIF27Q86VH2 1401 aa27.86■■■□□ 2.05
CTD-3080P12.3-203ENST00000514376 CSRNP3Q8WYN3 585 aa27.86■■■□□ 2.05
CTD-3080P12.3-203ENST00000514376 TARBP1Q13395 1621 aaKnown RBP27.85■■■□□ 2.05
CTD-3080P12.3-203ENST00000514376 EHMT2Q96KQ7 1210 aa27.77■■■□□ 2.04
CTD-3080P12.3-203ENST00000514376 ABCA5Q8WWZ7 1642 aa27.72■■■□□ 2.03
CTD-3080P12.3-203ENST00000514376 IFT140Q96RY7 1462 aa27.72■■■□□ 2.03
CTD-3080P12.3-203ENST00000514376 KIF21BO75037 1637 aa27.7■■■□□ 2.02
CTD-3080P12.3-203ENST00000514376 TDRD9Q8NDG6 1382 aaKnown RBP27.7■■■□□ 2.02
CTD-3080P12.3-203ENST00000514376 IGF1RP08069 1367 aa27.67■■■□□ 2.02
CTD-3080P12.3-203ENST00000514376 PRXQ9BXM0 1461 aa27.64■■■□□ 2.01
CTD-3080P12.3-203ENST00000514376 ZNF608Q9ULD9 1512 aaPredicted RBP27.63■■■□□ 2.01
CTD-3080P12.3-203ENST00000514376 GAPVD1Q14C86 1478 aa27.62■■■□□ 2.01
CTD-3080P12.3-203ENST00000514376 GOLGA3Q08378 1498 aa27.61■■■□□ 2.01
CTD-3080P12.3-203ENST00000514376 RAPGEF2Q9Y4G8 1499 aa27.6■■■□□ 2.01
CTD-3080P12.3-203ENST00000514376 AQRO60306 1485 aaKnown RBP eCLIP27.59■■■□□ 2.01
CTD-3080P12.3-203ENST00000514376 PBRM1Q86U86 1689 aa27.56■■■□□ 2
CTD-3080P12.3-203ENST00000514376 ERICH3Q5RHP9 1530 aa27.55■■■□□ 2
CTD-3080P12.3-203ENST00000514376 EIF4G3O43432 1585 aaKnown RBP27.54■■■□□ 2
CTD-3080P12.3-203ENST00000514376 CARMIL1Q5VZK9 1371 aa27.51■■□□□ 1.99
CTD-3080P12.3-203ENST00000514376 CUL7Q14999 1698 aa27.51■■□□□ 1.99
CTD-3080P12.3-203ENST00000514376 UBTFP17480 764 aaKnown RBP27.45■■□□□ 1.99
CTD-3080P12.3-203ENST00000514376 GRIN2BQ13224 1484 aa27.45■■□□□ 1.98
CTD-3080P12.3-203ENST00000514376 TNIKQ9UKE5 1360 aa27.45■■□□□ 1.98
CTD-3080P12.3-203ENST00000514376 ADAMTS12P58397 1594 aa27.38■■□□□ 1.97
CTD-3080P12.3-203ENST00000514376 SNAPC4Q5SXM2 1469 aa27.33■■□□□ 1.97
CTD-3080P12.3-203ENST00000514376 CEP162Q5TB80 1403 aa27.31■■□□□ 1.96
CTD-3080P12.3-203ENST00000514376 FHAD1B1AJZ9 1412 aa27.31■■□□□ 1.96
CTD-3080P12.3-203ENST00000514376 MAGI1Q96QZ7 1491 aaPredicted RBP27.25■■□□□ 1.95
CTD-3080P12.3-203ENST00000514376 CTTNBP2Q8WZ74 1663 aa27.19■■□□□ 1.94
CTD-3080P12.3-203ENST00000514376 CLIP1P30622 1438 aa27.15■■□□□ 1.94
CTD-3080P12.3-203ENST00000514376 SYNJ2O15056 1496 aa27.15■■□□□ 1.94
CTD-3080P12.3-203ENST00000514376 RANGAP1P46060 587 aaPredicted RBP27.14■■□□□ 1.94
CTD-3080P12.3-203ENST00000514376 GRIN2AQ12879 1464 aa27.13■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 179 ms