RNA–Protein interactions for RNA: ENST00000508481.5

CDV3-207, Transcript of CDV3 homolog, humanhuman

TSL 3 BASIC

Gene CDV3, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDV3-207ENST00000508481 NISCHQ9Y2I1 1504 aa43.89■■■■■ 4.62
CDV3-207ENST00000508481 CCDC180Q9P1Z9 1646 aa39.16■■■■□ 3.86
CDV3-207ENST00000508481 ABCC9O60706 1549 aa38.22■■■■□ 3.71
CDV3-207ENST00000508481 RB1CC1Q8TDY2 1594 aa36.81■■■■□ 3.48
CDV3-207ENST00000508481 NACADO15069 1562 aa36.77■■■■□ 3.48
CDV3-207ENST00000508481 MYO15BQ96JP2 1530 aa36.59■■■■□ 3.45
CDV3-207ENST00000508481 ZCCHC6Q5VYS8 1495 aaKnown RBP36.58■■■■□ 3.45
CDV3-207ENST00000508481 DCAF8L2P0C7V8 631 aa36.42■■■■□ 3.42
CDV3-207ENST00000508481 DCAF1Q9Y4B6 1507 aa36.39■■■■□ 3.42
CDV3-207ENST00000508481 UNC13AQ9UPW8 1703 aa36.08■■■■□ 3.37
CDV3-207ENST00000508481 BICRAQ9NZM4 1560 aa35.75■■■■□ 3.31
CDV3-207ENST00000508481 PABPN1Q86U42 306 aaKnown RBP eCLIP35.61■■■■□ 3.29
CDV3-207ENST00000508481 SCRIBQ14160 1630 aa35.6■■■■□ 3.29
CDV3-207ENST00000508481 SHROOM4Q9ULL8 1493 aa35.4■■■■□ 3.26
CDV3-207ENST00000508481 DNAJC5BQ9UF47 199 aa35.12■■■■□ 3.21
CDV3-207ENST00000508481 EIF4G1Q04637 1599 aaKnown RBP34.78■■■■□ 3.16
CDV3-207ENST00000508481 CC2D2AQ9P2K1 1620 aa34.65■■■■□ 3.14
CDV3-207ENST00000508481 CECR2Q9BXF3 1484 aa34.37■■■■□ 3.09
CDV3-207ENST00000508481 SMARCA4P51532 1647 aa34.11■■■■□ 3.05
CDV3-207ENST00000508481 BAZ1AQ9NRL2 1556 aaPredicted RBP34.03■■■■□ 3.04
CDV3-207ENST00000508481 NCAPD3P42695 1498 aa33.9■■■■□ 3.02
CDV3-207ENST00000508481 ATAD2BQ9ULI0 1458 aa33.9■■■■□ 3.02
CDV3-207ENST00000508481 SMARCA2P51531 1590 aa33.87■■■■□ 3.01
CDV3-207ENST00000508481 PEG3Q9GZU2 1588 aa33.83■■■■□ 3.01
CDV3-207ENST00000508481 MROH2BQ7Z745 1585 aa33.81■■■■□ 3
CDV3-207ENST00000508481 HMGXB3Q12766 1538 aa33.79■■■■□ 3
CDV3-207ENST00000508481 BAZ1BQ9UIG0 1483 aaKnown RBP33.59■■■□□ 2.97
CDV3-207ENST00000508481 WIZO95785 1651 aa33.45■■■□□ 2.95
CDV3-207ENST00000508481 RSF1Q96T23 1441 aaPredicted RBP33.36■■■□□ 2.93
CDV3-207ENST00000508481 TOP2AP11388 1531 aaKnown RBP33.11■■■□□ 2.89
CDV3-207ENST00000508481 NESP48681 1621 aa33.07■■■□□ 2.88
CDV3-207ENST00000508481 LAMC3Q9Y6N6 1575 aa33.05■■■□□ 2.88
CDV3-207ENST00000508481 ERCC6Q03468 1493 aa32.93■■■□□ 2.86
CDV3-207ENST00000508481 CADPSQ9ULU8 1353 aa32.86■■■□□ 2.85
CDV3-207ENST00000508481 KIF21AQ7Z4S6 1674 aa32.77■■■□□ 2.84
CDV3-207ENST00000508481 PDS5BQ9NTI5 1447 aa32.75■■■□□ 2.83
CDV3-207ENST00000508481 CUX2O14529 1486 aa32.71■■■□□ 2.83
CDV3-207ENST00000508481 THOC2Q8NI27 1593 aaKnown RBP32.7■■■□□ 2.83
CDV3-207ENST00000508481 CFTRP13569 1480 aa32.7■■■□□ 2.83
CDV3-207ENST00000508481 CCDC88BA6NC98 1476 aa32.66■■■□□ 2.82
CDV3-207ENST00000508481 PRDM2Q13029 1718 aa32.57■■■□□ 2.81
CDV3-207ENST00000508481 FANCD2Q9BXW9 1451 aa32.49■■■□□ 2.79
CDV3-207ENST00000508481 CEP164Q9UPV0 1460 aa32.48■■■□□ 2.79
CDV3-207ENST00000508481 MRC2Q9UBG0 1479 aa32.46■■■□□ 2.79
CDV3-207ENST00000508481 WDR62O43379 1518 aa32.41■■■□□ 2.78
CDV3-207ENST00000508481 SUPT5HO00267 1087 aaKnown RBP32.27■■■□□ 2.76
CDV3-207ENST00000508481 URB2Q14146 1524 aaKnown RBP32.21■■■□□ 2.75
CDV3-207ENST00000508481 TOPBP1Q92547 1522 aa32■■■□□ 2.71
CDV3-207ENST00000508481 ABCC8Q09428 1581 aa31.98■■■□□ 2.71
CDV3-207ENST00000508481 DNMBPQ6XZF7 1577 aa31.98■■■□□ 2.71
CDV3-207ENST00000508481 IFT140Q96RY7 1462 aa31.8■■■□□ 2.68
CDV3-207ENST00000508481 CUX1P39880 1505 aa31.73■■■□□ 2.67
CDV3-207ENST00000508481 POLA1P09884 1462 aaPredicted RBP31.72■■■□□ 2.67
CDV3-207ENST00000508481 DNAJC5Q9H3Z4 198 aa31.71■■■□□ 2.67
CDV3-207ENST00000508481 TARBP1Q13395 1621 aaKnown RBP31.71■■■□□ 2.67
CDV3-207ENST00000508481 ZNF608Q9ULD9 1512 aaPredicted RBP31.65■■■□□ 2.66
CDV3-207ENST00000508481 FGD5Q6ZNL6 1462 aa31.61■■■□□ 2.65
CDV3-207ENST00000508481 EIF4G3O43432 1585 aaKnown RBP31.59■■■□□ 2.65
CDV3-207ENST00000508481 RAD54L2Q9Y4B4 1467 aa31.52■■■□□ 2.64
CDV3-207ENST00000508481 SOGA1O94964 1423 aa31.51■■■□□ 2.64
CDV3-207ENST00000508481 BIVM-ERCC5R4GMW8 1640 aa31.49■■■□□ 2.63
CDV3-207ENST00000508481 WDR97A6NE52 1622 aa31.49■■■□□ 2.63
CDV3-207ENST00000508481 TOP2BQ02880 1626 aa31.46■■■□□ 2.63
CDV3-207ENST00000508481 WRNQ14191 1432 aaPredicted RBP eCLIP31.45■■■□□ 2.63
CDV3-207ENST00000508481 SYNJ1O43426 1573 aa31.43■■■□□ 2.62
CDV3-207ENST00000508481 AQRO60306 1485 aaKnown RBP eCLIP31.42■■■□□ 2.622e-11■■□□□ 14.3
CDV3-207ENST00000508481 ABCA10Q8WWZ4 1543 aa31.34■■■□□ 2.61
CDV3-207ENST00000508481 TDRD9Q8NDG6 1382 aaKnown RBP31.32■■■□□ 2.6
CDV3-207ENST00000508481 ABCA5Q8WWZ7 1642 aa31.27■■■□□ 2.6
CDV3-207ENST00000508481 PBRM1Q86U86 1689 aa31.22■■■□□ 2.59
CDV3-207ENST00000508481 CHD1O14646 1710 aa31.22■■■□□ 2.59
CDV3-207ENST00000508481 GRIN2BQ13224 1484 aa31.21■■■□□ 2.59
CDV3-207ENST00000508481 OSCARQ8IYS5 282 aa31.2■■■□□ 2.59
CDV3-207ENST00000508481 GAPVD1Q14C86 1478 aa31.19■■■□□ 2.58
CDV3-207ENST00000508481 SNAPC4Q5SXM2 1469 aa31.17■■■□□ 2.58
CDV3-207ENST00000508481 MAGI1Q96QZ7 1491 aaPredicted RBP31.16■■■□□ 2.58
CDV3-207ENST00000508481 SYNJ2O15056 1496 aa31.02■■■□□ 2.56
CDV3-207ENST00000508481 ERICH3Q5RHP9 1530 aa30.97■■■□□ 2.55
CDV3-207ENST00000508481 ADAMTS12P58397 1594 aa30.96■■■□□ 2.55
CDV3-207ENST00000508481 FBLN2P98095 1184 aa30.93■■■□□ 2.54
CDV3-207ENST00000508481 CHMP7Q8WUX9 453 aaPredicted RBP30.89■■■□□ 2.54
CDV3-207ENST00000508481 CLASP1Q7Z460 1538 aa30.88■■■□□ 2.53
CDV3-207ENST00000508481 RIMBP3CA6NJZ7 1639 aa30.84■■■□□ 2.53
CDV3-207ENST00000508481 RIMBP3BA6NNM3 1639 aa30.84■■■□□ 2.53
CDV3-207ENST00000508481 RIMBP3Q9UFD9 1639 aa30.84■■■□□ 2.53
CDV3-207ENST00000508481 GRIN2AQ12879 1464 aa30.82■■■□□ 2.53
CDV3-207ENST00000508481 FHAD1B1AJZ9 1412 aa30.82■■■□□ 2.52
CDV3-207ENST00000508481 ARHGEF11O15085 1522 aa30.82■■■□□ 2.52
CDV3-207ENST00000508481 KIF27Q86VH2 1401 aa30.78■■■□□ 2.52
CDV3-207ENST00000508481 NUP160Q12769 1436 aa30.72■■■□□ 2.51
CDV3-207ENST00000508481 CEP170Q5SW79 1584 aa30.7■■■□□ 2.5
CDV3-207ENST00000508481 CUL7Q14999 1698 aa30.69■■■□□ 2.5
CDV3-207ENST00000508481 IGF1RP08069 1367 aa30.66■■■□□ 2.5
CDV3-207ENST00000508481 ARAP1Q96P48 1450 aa30.57■■■□□ 2.48
CDV3-207ENST00000508481 SHROOM2Q13796 1616 aa30.55■■■□□ 2.48
CDV3-207ENST00000508481 TRIM41Q8WV44 630 aa30.52■■■□□ 2.48
CDV3-207ENST00000508481 RUSC2Q8N2Y8 1516 aa30.51■■■□□ 2.47
CDV3-207ENST00000508481 CARMIL1Q5VZK9 1371 aa30.47■■■□□ 2.47
CDV3-207ENST00000508481 ERCC6L2Q5T890 1561 aa30.4■■■□□ 2.46
CDV3-207ENST00000508481 CYB5RLQ6IPT4 315 aa30.38■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms