RNA–Protein interactions for RNA: ENST00000535325.5

FYCO1-205, Transcript of FYVE and coiled-coil domain containing 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene FYCO1, Length 8,578 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FYCO1-205ENST00000535325 NISCHQ9Y2I1 1504 aa26.21■■□□□ 1.79
FYCO1-205ENST00000535325 DCAF8L2P0C7V8 631 aa25.69■■□□□ 1.7
FYCO1-205ENST00000535325 PELP1Q8IZL8 1130 aaKnown RBP25.23■■□□□ 1.63
FYCO1-205ENST00000535325 SUPT5HO00267 1087 aaKnown RBP24.84■■□□□ 1.57
FYCO1-205ENST00000535325 SHROOM4Q9ULL8 1493 aa24.36■■□□□ 1.49
FYCO1-205ENST00000535325 APLP2Q06481 763 aa24.32■■□□□ 1.48
FYCO1-205ENST00000535325 ZEB1P37275 1124 aaPredicted RBP24.26■■□□□ 1.47
FYCO1-205ENST00000535325 MYT1Q01538 1121 aa24.18■■□□□ 1.46
FYCO1-205ENST00000535325 FAM9AQ8IZU1 332 aaPredicted RBP24.1■■□□□ 1.45
FYCO1-205ENST00000535325 CENPBP07199 599 aaPredicted RBP24.03■■□□□ 1.44
FYCO1-205ENST00000535325 CCER1Q8TC90 406 aaPredicted RBP24■■□□□ 1.43
FYCO1-205ENST00000535325 PCGF6Q9BYE7 350 aa23.67■■□□□ 1.38
FYCO1-205ENST00000535325 ERICH6Q7L0X2 663 aa23.62■■□□□ 1.37
FYCO1-205ENST00000535325 EHMT2Q96KQ7 1210 aa23.47■■□□□ 1.35
FYCO1-205ENST00000535325 TRIM41Q8WV44 630 aa23.43■■□□□ 1.34
FYCO1-205ENST00000535325 NEFLP07196 543 aa23.38■■□□□ 1.33
FYCO1-205ENST00000535325 TRIM26Q12899 539 aaPredicted RBP23.15■■□□□ 1.3
FYCO1-205ENST00000535325 UBTFP17480 764 aaKnown RBP23.07■■□□□ 1.28
FYCO1-205ENST00000535325 YTHDC1Q96MU7 727 aaKnown RBP22.96■■□□□ 1.27
FYCO1-205ENST00000535325 TTBK1Q5TCY1 1321 aaPredicted RBP22.91■■□□□ 1.26
FYCO1-205ENST00000535325 HRCP23327 699 aa22.83■■□□□ 1.25
FYCO1-205ENST00000535325 ATP1B4Q9UN42 357 aaPredicted RBP22.75■■□□□ 1.23
FYCO1-205ENST00000535325 DAXXQ9UER7 740 aaPredicted RBP22.73■■□□□ 1.23
FYCO1-205ENST00000535325 CCDC180Q9P1Z9 1646 aa22.66■■□□□ 1.22
FYCO1-205ENST00000535325 RANGAP1P46060 587 aaPredicted RBP22.62■■□□□ 1.21
FYCO1-205ENST00000535325 CHIC1Q5VXU3 224 aa22.32■■□□□ 1.16
FYCO1-205ENST00000535325 DIEXFQ68CQ4 756 aaKnown RBP22.27■■□□□ 1.16
FYCO1-205ENST00000535325 RTL5Q5HYW3 569 aaPredicted RBP22.27■■□□□ 1.16
FYCO1-205ENST00000535325 CLSPNQ9HAW4 1339 aa22.23■■□□□ 1.15
FYCO1-205ENST00000535325 ZNF316A6NFI3 1004 aaPredicted RBP22.17■■□□□ 1.14
FYCO1-205ENST00000535325 PPARGC1BQ86YN6 1023 aaKnown RBP22.06■■□□□ 1.12
FYCO1-205ENST00000535325 LOC105371045A0A1W2PR82 267 aa22■■□□□ 1.11
FYCO1-205ENST00000535325 HNRNPUL2Q1KMD3 747 aaKnown RBP21.99■■□□□ 1.11
FYCO1-205ENST00000535325 ITGAEP38570 1179 aa21.98■■□□□ 1.11
FYCO1-205ENST00000535325 DCAF1Q9Y4B6 1507 aa21.98■■□□□ 1.11
FYCO1-205ENST00000535325 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.96■■□□□ 1.11
FYCO1-205ENST00000535325 POLR3GLQ9BT43 218 aa21.89■■□□□ 1.09
FYCO1-205ENST00000535325 ANP32CO43423 234 aa21.88■■□□□ 1.09
FYCO1-205ENST00000535325 CDK11AQ9UQ88 783 aaPredicted RBP21.87■■□□□ 1.09
FYCO1-205ENST00000535325 MYT1LQ9UL68 1186 aa21.86■■□□□ 1.09
FYCO1-205ENST00000535325 ZCCHC6Q5VYS8 1495 aaKnown RBP21.79■■□□□ 1.08
FYCO1-205ENST00000535325 SCRIBQ14160 1630 aa21.79■■□□□ 1.08
FYCO1-205ENST00000535325 FAM50AQ14320 339 aaKnown RBP21.75■■□□□ 1.07
FYCO1-205ENST00000535325 GTF3C3Q9Y5Q9 886 aa21.66■■□□□ 1.06
FYCO1-205ENST00000535325 ZBTB47Q9UFB7 747 aaPredicted RBP21.65■■□□□ 1.06
FYCO1-205ENST00000535325 ANP32AP39687 249 aaKnown RBP21.61■■□□□ 1.05
FYCO1-205ENST00000535325 SLC4A1APQ9BWU0 796 aaKnown RBP21.59■■□□□ 1.05
FYCO1-205ENST00000535325 ABCC9O60706 1549 aa21.59■■□□□ 1.05
FYCO1-205ENST00000535325 TRIM52Q96A61 297 aa21.58■■□□□ 1.04
FYCO1-205ENST00000535325 ACIN1Q9UKV3 1341 aaKnown RBP21.54■■□□□ 1.04
FYCO1-205ENST00000535325 NEFMP07197 916 aa21.48■■□□□ 1.03
FYCO1-205ENST00000535325 NEUROD1Q13562 356 aa21.47■■□□□ 1.03
FYCO1-205ENST00000535325 RB1CC1Q8TDY2 1594 aa21.43■■□□□ 1.02
FYCO1-205ENST00000535325 CANXP27824 592 aaKnown RBP21.41■■□□□ 1.02
FYCO1-205ENST00000535325 ANP32BQ92688 251 aaKnown RBP21.4■■□□□ 1.02
FYCO1-205ENST00000535325 EEA1Q15075 1411 aa21.34■■□□□ 1.01
FYCO1-205ENST00000535325 TONSLQ96HA7 1378 aa21.33■■□□□ 1.01
FYCO1-205ENST00000535325 NACADO15069 1562 aa21.33■■□□□ 1.01
FYCO1-205ENST00000535325 CSRNP3Q8WYN3 585 aa21.32■■□□□ 1
FYCO1-205ENST00000535325 UPF2Q9HAU5 1272 aaKnown RBP21.31■■□□□ 1
FYCO1-205ENST00000535325 GLIPR1L2Q4G1C9 344 aa21.31■■□□□ 1
FYCO1-205ENST00000535325 CNGB1Q14028 1251 aaPredicted RBP21.31■■□□□ 1
FYCO1-205ENST00000535325 BCANQ96GW7 911 aa21.19■□□□□ 0.98
FYCO1-205ENST00000535325 ZNF326Q5BKZ1 582 aaKnown RBP21.16■□□□□ 0.98
FYCO1-205ENST00000535325 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.13■□□□□ 0.97
FYCO1-205ENST00000535325 GOLGA3Q08378 1498 aa21.1■□□□□ 0.97
FYCO1-205ENST00000535325 HSP90AA1P07900 732 aaKnown RBP21.08■□□□□ 0.97
FYCO1-205ENST00000535325 PABPN1Q86U42 306 aaKnown RBP eCLIP21.04■□□□□ 0.96
FYCO1-205ENST00000535325 EIF5BO60841 1220 aaKnown RBP21.04■□□□□ 0.96
FYCO1-205ENST00000535325 ANP32EQ9BTT0 268 aa21.03■□□□□ 0.96
FYCO1-205ENST00000535325 RSF1Q96T23 1441 aaPredicted RBP21.01■□□□□ 0.95
FYCO1-205ENST00000535325 CLIP1P30622 1438 aa20.99■□□□□ 0.95
FYCO1-205ENST00000535325 FKBP8Q14318 412 aa20.98■□□□□ 0.95
FYCO1-205ENST00000535325 BAZ1AQ9NRL2 1556 aaPredicted RBP20.96■□□□□ 0.95
FYCO1-205ENST00000535325 HNRNPUQ00839 825 aaKnown RBP eCLIP20.96■□□□□ 0.95
FYCO1-205ENST00000535325 CEP164Q9UPV0 1460 aa20.93■□□□□ 0.94
FYCO1-205ENST00000535325 DDRGK1Q96HY6 314 aa20.92■□□□□ 0.94
FYCO1-205ENST00000535325 CCDC136Q96JN2 1154 aa20.9■□□□□ 0.94
FYCO1-205ENST00000535325 TMC1Q8TDI8 760 aa20.9■□□□□ 0.94
FYCO1-205ENST00000535325 MTUS2Q5JR59 1369 aa20.87■□□□□ 0.93
FYCO1-205ENST00000535325 BECN1Q14457 450 aa20.84■□□□□ 0.93
FYCO1-205ENST00000535325 FBLN2P98095 1184 aa20.84■□□□□ 0.93
FYCO1-205ENST00000535325 NPM2Q86SE8 214 aaKnown RBP20.84■□□□□ 0.93
FYCO1-205ENST00000535325 CEP162Q5TB80 1403 aa20.83■□□□□ 0.93
FYCO1-205ENST00000535325 WDR43Q15061 677 aaKnown RBP eCLIP20.81■□□□□ 0.92
FYCO1-205ENST00000535325 SLC24A1O60721 1099 aa20.81■□□□□ 0.92
FYCO1-205ENST00000535325 MYH16Q9H6N6 1097 aa20.78■□□□□ 0.92
FYCO1-205ENST00000535325 BAZ1BQ9UIG0 1483 aaKnown RBP20.77■□□□□ 0.91
FYCO1-205ENST00000535325 DDX10Q13206 875 aaKnown RBP20.75■□□□□ 0.91
FYCO1-205ENST00000535325 ESF1Q9H501 851 aaKnown RBP20.74■□□□□ 0.91
FYCO1-205ENST00000535325 ZNF777Q9ULD5 760 aaPredicted RBP20.73■□□□□ 0.91
FYCO1-205ENST00000535325 FHAD1B1AJZ9 1412 aa20.73■□□□□ 0.91
FYCO1-205ENST00000535325 EIF4G2P78344 907 aaKnown RBP eCLIP20.73■□□□□ 0.91
FYCO1-205ENST00000535325 KIF27Q86VH2 1401 aa20.73■□□□□ 0.91
FYCO1-205ENST00000535325 P3H3Q8IVL6 736 aa20.71■□□□□ 0.91
FYCO1-205ENST00000535325 FAM9BQ8IZU0 186 aa20.71■□□□□ 0.91
FYCO1-205ENST00000535325 TNIKQ9UKE5 1360 aa20.7■□□□□ 0.9
FYCO1-205ENST00000535325 CDCA8Q53HL2 280 aa20.69■□□□□ 0.9
FYCO1-205ENST00000535325 MRS2Q9HD23 443 aa20.69■□□□□ 0.9
FYCO1-205ENST00000535325 GOLGA6L22H0YM25 854 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 160.4 ms