Protein–RNA interactions for Protein: Q8NDX1

PSD4, PH and SEC7 domain-containing protein 4, humanhuman

Predictions only

Length 1,056 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSD4Q8NDX1 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
PSD4Q8NDX1 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.12
PSD4Q8NDX1 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
PSD4Q8NDX1 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.77■□□□□ 0.12
PSD4Q8NDX1 RHBDF1P1-201ENST00000427504 1941 ntBASIC15.77■□□□□ 0.12
PSD4Q8NDX1 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.77■□□□□ 0.12
PSD4Q8NDX1 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
PSD4Q8NDX1 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
PSD4Q8NDX1 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PSD4Q8NDX1 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.77■□□□□ 0.12
PSD4Q8NDX1 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
PSD4Q8NDX1 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.77■□□□□ 0.12
PSD4Q8NDX1 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.77■□□□□ 0.12
PSD4Q8NDX1 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC15.77■□□□□ 0.12
PSD4Q8NDX1 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15.77■□□□□ 0.12
PSD4Q8NDX1 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC15.77■□□□□ 0.12
PSD4Q8NDX1 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.77■□□□□ 0.12
PSD4Q8NDX1 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
PSD4Q8NDX1 AC006538.3-201ENST00000612495 578 ntBASIC15.77■□□□□ 0.12
PSD4Q8NDX1 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PSD4Q8NDX1 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PSD4Q8NDX1 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
PSD4Q8NDX1 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PSD4Q8NDX1 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
PSD4Q8NDX1 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
PSD4Q8NDX1 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
PSD4Q8NDX1 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
PSD4Q8NDX1 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PSD4Q8NDX1 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
PSD4Q8NDX1 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
PSD4Q8NDX1 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.11
PSD4Q8NDX1 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PSD4Q8NDX1 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PSD4Q8NDX1 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PSD4Q8NDX1 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PSD4Q8NDX1 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
PSD4Q8NDX1 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
PSD4Q8NDX1 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PSD4Q8NDX1 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
PSD4Q8NDX1 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
PSD4Q8NDX1 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PSD4Q8NDX1 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PSD4Q8NDX1 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.76■□□□□ 0.11
PSD4Q8NDX1 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PSD4Q8NDX1 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PSD4Q8NDX1 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.76■□□□□ 0.11
PSD4Q8NDX1 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
PSD4Q8NDX1 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PSD4Q8NDX1 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
PSD4Q8NDX1 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PSD4Q8NDX1 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
PSD4Q8NDX1 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.76■□□□□ 0.11
PSD4Q8NDX1 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
PSD4Q8NDX1 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PSD4Q8NDX1 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
PSD4Q8NDX1 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.76■□□□□ 0.11
PSD4Q8NDX1 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
PSD4Q8NDX1 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC15.76■□□□□ 0.11
PSD4Q8NDX1 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
PSD4Q8NDX1 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.76■□□□□ 0.11
PSD4Q8NDX1 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC15.76■□□□□ 0.11
PSD4Q8NDX1 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC15.76■□□□□ 0.11
PSD4Q8NDX1 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC15.76■□□□□ 0.11
PSD4Q8NDX1 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
PSD4Q8NDX1 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.76■□□□□ 0.11
PSD4Q8NDX1 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
PSD4Q8NDX1 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.76■□□□□ 0.11
PSD4Q8NDX1 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PSD4Q8NDX1 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PSD4Q8NDX1 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
PSD4Q8NDX1 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PSD4Q8NDX1 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
PSD4Q8NDX1 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PSD4Q8NDX1 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PSD4Q8NDX1 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PSD4Q8NDX1 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PSD4Q8NDX1 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
PSD4Q8NDX1 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PSD4Q8NDX1 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PSD4Q8NDX1 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PSD4Q8NDX1 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.76■□□□□ 0.11
PSD4Q8NDX1 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
PSD4Q8NDX1 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
PSD4Q8NDX1 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PSD4Q8NDX1 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PSD4Q8NDX1 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PSD4Q8NDX1 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
PSD4Q8NDX1 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PSD4Q8NDX1 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.75■□□□□ 0.11
PSD4Q8NDX1 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PSD4Q8NDX1 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.75■□□□□ 0.11
PSD4Q8NDX1 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
PSD4Q8NDX1 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC15.75■□□□□ 0.11
PSD4Q8NDX1 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.75■□□□□ 0.11
PSD4Q8NDX1 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PSD4Q8NDX1 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.75■□□□□ 0.11
PSD4Q8NDX1 AC002347.1-201ENST00000569543 541 ntBASIC15.75■□□□□ 0.11
PSD4Q8NDX1 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.75■□□□□ 0.11
PSD4Q8NDX1 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.75■□□□□ 0.11
PSD4Q8NDX1 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms