RNA–Protein interactions for RNA: ENST00000579344.1

CCR7-203, Transcript of C-C motif chemokine receptor 7, humanhuman

TSL 1 (best) BASIC

Gene CCR7, Length 1,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR7-203ENST00000579344 NISCHQ9Y2I1 1504 aa30.52■■■□□ 2.48
CCR7-203ENST00000579344 HRCP23327 699 aa27.04■■□□□ 1.92
CCR7-203ENST00000579344 PELP1Q8IZL8 1130 aaKnown RBP26.47■■□□□ 1.83
CCR7-203ENST00000579344 MYO15BQ96JP2 1530 aa26.25■■□□□ 1.79
CCR7-203ENST00000579344 DCAF1Q9Y4B6 1507 aa26.21■■□□□ 1.79
CCR7-203ENST00000579344 SHROOM4Q9ULL8 1493 aa26.19■■□□□ 1.78
CCR7-203ENST00000579344 SUPT5HO00267 1087 aaKnown RBP26.16■■□□□ 1.78
CCR7-203ENST00000579344 CHIC1Q5VXU3 224 aa26.16■■□□□ 1.78
CCR7-203ENST00000579344 PCGF6Q9BYE7 350 aa26.1■■□□□ 1.77
CCR7-203ENST00000579344 ZCCHC6Q5VYS8 1495 aaKnown RBP26.06■■□□□ 1.76
CCR7-203ENST00000579344 PPARGC1BQ86YN6 1023 aaKnown RBP25.94■■□□□ 1.74
CCR7-203ENST00000579344 CCDC180Q9P1Z9 1646 aa25.87■■□□□ 1.73
CCR7-203ENST00000579344 ZEB1P37275 1124 aaPredicted RBP25.7■■□□□ 1.71
CCR7-203ENST00000579344 TRIM26Q12899 539 aaPredicted RBP25.66■■□□□ 1.7
CCR7-203ENST00000579344 MYT1Q01538 1121 aa25.61■■□□□ 1.69
CCR7-203ENST00000579344 SCAF1Q9H7N4 1312 aaKnown RBP25.37■■□□□ 1.65
CCR7-203ENST00000579344 LOC105371045A0A1W2PR82 267 aa25.18■■□□□ 1.62
CCR7-203ENST00000579344 ACIN1Q9UKV3 1341 aaKnown RBP24.92■■□□□ 1.58
CCR7-203ENST00000579344 ABCC9O60706 1549 aa24.77■■□□□ 1.56
CCR7-203ENST00000579344 CENPBP07199 599 aaPredicted RBP24.68■■□□□ 1.54
CCR7-203ENST00000579344 NEUROD1Q13562 356 aa24.66■■□□□ 1.54
CCR7-203ENST00000579344 GTF3C3Q9Y5Q9 886 aa24.51■■□□□ 1.51
CCR7-203ENST00000579344 TRIM41Q8WV44 630 aa24.47■■□□□ 1.51
CCR7-203ENST00000579344 RSF1Q96T23 1441 aaPredicted RBP24.45■■□□□ 1.5
CCR7-203ENST00000579344 RB1CC1Q8TDY2 1594 aa24.45■■□□□ 1.5
CCR7-203ENST00000579344 DCAF8L2P0C7V8 631 aa24.43■■□□□ 1.5
CCR7-203ENST00000579344 DIEXFQ68CQ4 756 aaKnown RBP24.39■■□□□ 1.5
CCR7-203ENST00000579344 CCER1Q8TC90 406 aaPredicted RBP24.26■■□□□ 1.47
CCR7-203ENST00000579344 WRNQ14191 1432 aaPredicted RBP eCLIP24.19■■□□□ 1.46
CCR7-203ENST00000579344 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.15■■□□□ 1.46
CCR7-203ENST00000579344 TTBK1Q5TCY1 1321 aaPredicted RBP24.14■■□□□ 1.45
CCR7-203ENST00000579344 ZNF316A6NFI3 1004 aaPredicted RBP24.04■■□□□ 1.44
CCR7-203ENST00000579344 FAM9AQ8IZU1 332 aaPredicted RBP24.04■■□□□ 1.44
CCR7-203ENST00000579344 CLSPNQ9HAW4 1339 aa24.03■■□□□ 1.44
CCR7-203ENST00000579344 EIF4G1Q04637 1599 aaKnown RBP23.89■■□□□ 1.41
CCR7-203ENST00000579344 SCRIBQ14160 1630 aa23.85■■□□□ 1.41
CCR7-203ENST00000579344 TNIKQ9UKE5 1360 aa23.73■■□□□ 1.39
CCR7-203ENST00000579344 CEP162Q5TB80 1403 aa23.71■■□□□ 1.39
CCR7-203ENST00000579344 BAZ1AQ9NRL2 1556 aaPredicted RBP23.68■■□□□ 1.38
CCR7-203ENST00000579344 MIER1Q8N108 512 aa23.68■■□□□ 1.38
CCR7-203ENST00000579344 EEA1Q15075 1411 aa23.67■■□□□ 1.38
CCR7-203ENST00000579344 MROH2BQ7Z745 1585 aa23.65■■□□□ 1.38
CCR7-203ENST00000579344 YTHDC1Q96MU7 727 aaKnown RBP23.58■■□□□ 1.36
CCR7-203ENST00000579344 EHMT2Q96KQ7 1210 aa23.57■■□□□ 1.36
CCR7-203ENST00000579344 CECR2Q9BXF3 1484 aa23.56■■□□□ 1.36
CCR7-203ENST00000579344 ANP32EQ9BTT0 268 aa23.53■■□□□ 1.36
CCR7-203ENST00000579344 WIZO95785 1651 aa23.53■■□□□ 1.36
CCR7-203ENST00000579344 SUPT16HQ9Y5B9 1047 aaKnown RBP23.47■■□□□ 1.35
CCR7-203ENST00000579344 NACADO15069 1562 aa23.46■■□□□ 1.35
CCR7-203ENST00000579344 CCDC88BA6NC98 1476 aa23.41■■□□□ 1.34
CCR7-203ENST00000579344 GOLGA3Q08378 1498 aa23.39■■□□□ 1.34
CCR7-203ENST00000579344 TOP2AP11388 1531 aaKnown RBP23.37■■□□□ 1.33
CCR7-203ENST00000579344 TSHZ2Q9NRE2 1034 aa23.37■■□□□ 1.33
CCR7-203ENST00000579344 BCL11AQ9H165 835 aa23.34■■□□□ 1.33
CCR7-203ENST00000579344 CSRNP3Q8WYN3 585 aa23.3■■□□□ 1.32
CCR7-203ENST00000579344 ABCC8Q09428 1581 aa23.3■■□□□ 1.32
CCR7-203ENST00000579344 SOGA1O94964 1423 aa23.27■■□□□ 1.32
CCR7-203ENST00000579344 KIF21BO75037 1637 aa23.24■■□□□ 1.31
CCR7-203ENST00000579344 SMARCA2P51531 1590 aa23.21■■□□□ 1.31
CCR7-203ENST00000579344 CEP164Q9UPV0 1460 aa23.18■■□□□ 1.3
CCR7-203ENST00000579344 VPS8Q8N3P4 1428 aa23.18■■□□□ 1.3
CCR7-203ENST00000579344 BAZ1BQ9UIG0 1483 aaKnown RBP23.15■■□□□ 1.3
CCR7-203ENST00000579344 UBTFP17480 764 aaKnown RBP23.1■■□□□ 1.29
CCR7-203ENST00000579344 CLIP1P30622 1438 aa23.08■■□□□ 1.29
CCR7-203ENST00000579344 HNRNPUL2Q1KMD3 747 aaKnown RBP23.08■■□□□ 1.29
CCR7-203ENST00000579344 DHX57Q6P158 1386 aaKnown RBP23.08■■□□□ 1.28
CCR7-203ENST00000579344 RUSC2Q8N2Y8 1516 aa23.06■■□□□ 1.28
CCR7-203ENST00000579344 SMARCA4P51532 1647 aa23.03■■□□□ 1.28
CCR7-203ENST00000579344 CUX2O14529 1486 aa23.02■■□□□ 1.28
CCR7-203ENST00000579344 UNC13AQ9UPW8 1703 aa22.92■■□□□ 1.26
CCR7-203ENST00000579344 APLP2Q06481 763 aa22.9■■□□□ 1.26
CCR7-203ENST00000579344 RRBP1Q9P2E9 1410 aaKnown RBP22.86■■□□□ 1.25
CCR7-203ENST00000579344 RBM19Q9Y4C8 960 aaKnown RBP22.81■■□□□ 1.24
CCR7-203ENST00000579344 MYT1LQ9UL68 1186 aa22.77■■□□□ 1.24
CCR7-203ENST00000579344 SYNJ1O43426 1573 aa22.76■■□□□ 1.23
CCR7-203ENST00000579344 ERICH3Q5RHP9 1530 aa22.73■■□□□ 1.23
CCR7-203ENST00000579344 FANCIQ9NVI1 1328 aa22.73■■□□□ 1.23
CCR7-203ENST00000579344 PEG3Q9GZU2 1588 aa22.72■■□□□ 1.23
CCR7-203ENST00000579344 RAPGEF2Q9Y4G8 1499 aa22.71■■□□□ 1.23
CCR7-203ENST00000579344 FKBP8Q14318 412 aa22.71■■□□□ 1.23
CCR7-203ENST00000579344 NEFLP07196 543 aa22.69■■□□□ 1.22
CCR7-203ENST00000579344 CCER2I3L3R5 266 aa22.68■■□□□ 1.22
CCR7-203ENST00000579344 ARAP1Q96P48 1450 aa22.64■■□□□ 1.21
CCR7-203ENST00000579344 TIMELESSQ9UNS1 1208 aa22.61■■□□□ 1.21
CCR7-203ENST00000579344 MAPKBP1O60336 1514 aa22.6■■□□□ 1.21
CCR7-203ENST00000579344 BICRAQ9NZM4 1560 aa22.6■■□□□ 1.21
CCR7-203ENST00000579344 CCNB3Q8WWL7 1395 aa22.57■■□□□ 1.2
CCR7-203ENST00000579344 PRXQ9BXM0 1461 aa22.56■■□□□ 1.2
CCR7-203ENST00000579344 KCNH8Q96L42 1107 aa22.55■■□□□ 1.2
CCR7-203ENST00000579344 BCANQ96GW7 911 aa22.54■■□□□ 1.2
CCR7-203ENST00000579344 MSH5O43196 834 aa22.54■■□□□ 1.2
CCR7-203ENST00000579344 PPP1R15AO75807 674 aaPredicted RBP22.54■■□□□ 1.2
CCR7-203ENST00000579344 TOP2BQ02880 1626 aa22.52■■□□□ 1.2
CCR7-203ENST00000579344 ERICH6BQ5W0A0 696 aa22.51■■□□□ 1.19
CCR7-203ENST00000579344 MAP3K1Q13233 1512 aa22.51■■□□□ 1.19
CCR7-203ENST00000579344 BIVM-ERCC5R4GMW8 1640 aa22.46■■□□□ 1.19
CCR7-203ENST00000579344 PABPN1Q86U42 306 aaKnown RBP eCLIP22.45■■□□□ 1.19
CCR7-203ENST00000579344 KANK4Q5T7N3 995 aaPredicted RBP22.44■■□□□ 1.18
CCR7-203ENST00000579344 RAB3GAP2Q9H2M9 1393 aa22.43■■□□□ 1.18
CCR7-203ENST00000579344 WDR97A6NE52 1622 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms