RNA–Protein interactions for RNA: ENST00000308982.11

ACAD9-201, Transcript of acyl-CoA dehydrogenase family member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACAD9, Length 2,454 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACAD9-201ENST00000308982 NISCHQ9Y2I1 1504 aa34.12■■■■□ 3.05
ACAD9-201ENST00000308982 CCDC180Q9P1Z9 1646 aa29.05■■■□□ 2.24
ACAD9-201ENST00000308982 SHROOM4Q9ULL8 1493 aa29.02■■■□□ 2.24
ACAD9-201ENST00000308982 ZCCHC6Q5VYS8 1495 aaKnown RBP28.84■■■□□ 2.21
ACAD9-201ENST00000308982 SUPT5HO00267 1087 aaKnown RBP28.33■■■□□ 2.13
ACAD9-201ENST00000308982 DCAF8L2P0C7V8 631 aa28.28■■■□□ 2.12
ACAD9-201ENST00000308982 DCAF1Q9Y4B6 1507 aa27.95■■■□□ 2.06
ACAD9-201ENST00000308982 CHIC1Q5VXU3 224 aa27.49■■□□□ 1.99
ACAD9-201ENST00000308982 MYO15BQ96JP2 1530 aa27.46■■□□□ 1.99
ACAD9-201ENST00000308982 SCRIBQ14160 1630 aa27.26■■□□□ 1.95
ACAD9-201ENST00000308982 ABCC9O60706 1549 aa27.19■■□□□ 1.94
ACAD9-201ENST00000308982 HRCP23327 699 aa27.04■■□□□ 1.92
ACAD9-201ENST00000308982 RSF1Q96T23 1441 aaPredicted RBP26.96■■□□□ 1.91
ACAD9-201ENST00000308982 PCGF6Q9BYE7 350 aa26.89■■□□□ 1.89
ACAD9-201ENST00000308982 NACADO15069 1562 aa26.86■■□□□ 1.89
ACAD9-201ENST00000308982 LOC105371045A0A1W2PR82 267 aa26.72■■□□□ 1.87
ACAD9-201ENST00000308982 RB1CC1Q8TDY2 1594 aa26.7■■□□□ 1.87
ACAD9-201ENST00000308982 CECR2Q9BXF3 1484 aa26.69■■□□□ 1.86
ACAD9-201ENST00000308982 PPARGC1BQ86YN6 1023 aaKnown RBP26.64■■□□□ 1.86
ACAD9-201ENST00000308982 MROH2BQ7Z745 1585 aa26.57■■□□□ 1.84
ACAD9-201ENST00000308982 WIZO95785 1651 aa26.43■■□□□ 1.82
ACAD9-201ENST00000308982 TRIM41Q8WV44 630 aa26.34■■□□□ 1.81
ACAD9-201ENST00000308982 UNC13AQ9UPW8 1703 aa26.22■■□□□ 1.79
ACAD9-201ENST00000308982 FAM9AQ8IZU1 332 aaPredicted RBP26.2■■□□□ 1.78
ACAD9-201ENST00000308982 BAZ1AQ9NRL2 1556 aaPredicted RBP26.19■■□□□ 1.78
ACAD9-201ENST00000308982 TRIM26Q12899 539 aaPredicted RBP26.13■■□□□ 1.77
ACAD9-201ENST00000308982 EIF4G1Q04637 1599 aaKnown RBP26.04■■□□□ 1.76
ACAD9-201ENST00000308982 SMARCA4P51532 1647 aa26.03■■□□□ 1.76
ACAD9-201ENST00000308982 EHMT2Q96KQ7 1210 aa26.02■■□□□ 1.76
ACAD9-201ENST00000308982 TOP2AP11388 1531 aaKnown RBP25.94■■□□□ 1.74
ACAD9-201ENST00000308982 PABPN1Q86U42 306 aaKnown RBP eCLIP25.88■■□□□ 1.73
ACAD9-201ENST00000308982 BICRAQ9NZM4 1560 aa25.87■■□□□ 1.73
ACAD9-201ENST00000308982 CCDC88BA6NC98 1476 aa25.86■■□□□ 1.73
ACAD9-201ENST00000308982 SMARCA2P51531 1590 aa25.84■■□□□ 1.73
ACAD9-201ENST00000308982 ABCC8Q09428 1581 aa25.79■■□□□ 1.72
ACAD9-201ENST00000308982 ZEB1P37275 1124 aaPredicted RBP25.58■■□□□ 1.69
ACAD9-201ENST00000308982 PEG3Q9GZU2 1588 aa25.52■■□□□ 1.68
ACAD9-201ENST00000308982 SOGA1O94964 1423 aa25.5■■□□□ 1.67
ACAD9-201ENST00000308982 RUSC2Q8N2Y8 1516 aa25.42■■□□□ 1.66
ACAD9-201ENST00000308982 ATAD2BQ9ULI0 1458 aa25.38■■□□□ 1.65
ACAD9-201ENST00000308982 WRNQ14191 1432 aaPredicted RBP eCLIP25.28■■□□□ 1.64
ACAD9-201ENST00000308982 BAZ1BQ9UIG0 1483 aaKnown RBP25.27■■□□□ 1.64
ACAD9-201ENST00000308982 CEP162Q5TB80 1403 aa25.25■■□□□ 1.63
ACAD9-201ENST00000308982 SYNJ1O43426 1573 aa25.25■■□□□ 1.63
ACAD9-201ENST00000308982 SCAF1Q9H7N4 1312 aaKnown RBP25.25■■□□□ 1.63
ACAD9-201ENST00000308982 CSRNP3Q8WYN3 585 aa25.24■■□□□ 1.63
ACAD9-201ENST00000308982 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.19■■□□□ 1.62
ACAD9-201ENST00000308982 TNIKQ9UKE5 1360 aa25.19■■□□□ 1.62
ACAD9-201ENST00000308982 EEA1Q15075 1411 aa25.18■■□□□ 1.62
ACAD9-201ENST00000308982 TTBK1Q5TCY1 1321 aaPredicted RBP25.12■■□□□ 1.61
ACAD9-201ENST00000308982 UBTFP17480 764 aaKnown RBP25.11■■□□□ 1.61
ACAD9-201ENST00000308982 GOLGA3Q08378 1498 aa25.07■■□□□ 1.6
ACAD9-201ENST00000308982 CCER1Q8TC90 406 aaPredicted RBP25.05■■□□□ 1.6
ACAD9-201ENST00000308982 KIF21BO75037 1637 aa24.95■■□□□ 1.58
ACAD9-201ENST00000308982 CEP164Q9UPV0 1460 aa24.94■■□□□ 1.58
ACAD9-201ENST00000308982 TOP2BQ02880 1626 aa24.9■■□□□ 1.58
ACAD9-201ENST00000308982 NCAPD3P42695 1498 aa24.89■■□□□ 1.57
ACAD9-201ENST00000308982 RAPGEF2Q9Y4G8 1499 aa24.87■■□□□ 1.57
ACAD9-201ENST00000308982 HMGXB3Q12766 1538 aa24.86■■□□□ 1.57
ACAD9-201ENST00000308982 BIVM-ERCC5R4GMW8 1640 aa24.82■■□□□ 1.56
ACAD9-201ENST00000308982 NEUROD1Q13562 356 aa24.81■■□□□ 1.56
ACAD9-201ENST00000308982 PELP1Q8IZL8 1130 aaKnown RBP24.81■■□□□ 1.56
ACAD9-201ENST00000308982 CLIP1P30622 1438 aa24.79■■□□□ 1.56
ACAD9-201ENST00000308982 ACIN1Q9UKV3 1341 aaKnown RBP24.78■■□□□ 1.56
ACAD9-201ENST00000308982 DIEXFQ68CQ4 756 aaKnown RBP24.74■■□□□ 1.55
ACAD9-201ENST00000308982 CUX1P39880 1505 aa24.73■■□□□ 1.55
ACAD9-201ENST00000308982 RANGAP1P46060 587 aaPredicted RBP24.73■■□□□ 1.55
ACAD9-201ENST00000308982 VPS8Q8N3P4 1428 aa24.67■■□□□ 1.54
ACAD9-201ENST00000308982 CFTRP13569 1480 aa24.67■■□□□ 1.54
ACAD9-201ENST00000308982 PRXQ9BXM0 1461 aa24.62■■□□□ 1.53
ACAD9-201ENST00000308982 GTF3C3Q9Y5Q9 886 aa24.57■■□□□ 1.52
ACAD9-201ENST00000308982 ERICH3Q5RHP9 1530 aa24.55■■□□□ 1.52
ACAD9-201ENST00000308982 HNRNPUL2Q1KMD3 747 aaKnown RBP24.51■■□□□ 1.51
ACAD9-201ENST00000308982 ARAP1Q96P48 1450 aa24.48■■□□□ 1.51
ACAD9-201ENST00000308982 PRDM2Q13029 1718 aa24.48■■□□□ 1.51
ACAD9-201ENST00000308982 KIF27Q86VH2 1401 aa24.48■■□□□ 1.51
ACAD9-201ENST00000308982 CENPBP07199 599 aaPredicted RBP24.47■■□□□ 1.51
ACAD9-201ENST00000308982 ZNF316A6NFI3 1004 aaPredicted RBP24.42■■□□□ 1.5
ACAD9-201ENST00000308982 APLP2Q06481 763 aa24.42■■□□□ 1.5
ACAD9-201ENST00000308982 CC2D2AQ9P2K1 1620 aa24.39■■□□□ 1.5
ACAD9-201ENST00000308982 CADPSQ9ULU8 1353 aa24.39■■□□□ 1.5
ACAD9-201ENST00000308982 KANK4Q5T7N3 995 aaPredicted RBP24.34■■□□□ 1.49
ACAD9-201ENST00000308982 YTHDC1Q96MU7 727 aaKnown RBP24.34■■□□□ 1.49
ACAD9-201ENST00000308982 CUX2O14529 1486 aa24.32■■□□□ 1.48
ACAD9-201ENST00000308982 IGF1RP08069 1367 aa24.29■■□□□ 1.48
ACAD9-201ENST00000308982 ARHGAP35Q9NRY4 1499 aa24.29■■□□□ 1.48
ACAD9-201ENST00000308982 FGD5Q6ZNL6 1462 aa24.28■■□□□ 1.48
ACAD9-201ENST00000308982 MIER1Q8N108 512 aa24.24■■□□□ 1.47
ACAD9-201ENST00000308982 FANCD2Q9BXW9 1451 aa24.18■■□□□ 1.46
ACAD9-201ENST00000308982 CARMIL1Q5VZK9 1371 aa24.15■■□□□ 1.46
ACAD9-201ENST00000308982 NESP48681 1621 aa24.15■■□□□ 1.46
ACAD9-201ENST00000308982 RAD54L2Q9Y4B4 1467 aa24.1■■□□□ 1.45
ACAD9-201ENST00000308982 RRBP1Q9P2E9 1410 aaKnown RBP24.08■■□□□ 1.45
ACAD9-201ENST00000308982 DNMBPQ6XZF7 1577 aa24.03■■□□□ 1.44
ACAD9-201ENST00000308982 DHX57Q6P158 1386 aaKnown RBP24.03■■□□□ 1.44
ACAD9-201ENST00000308982 TOPBP1Q92547 1522 aa24.02■■□□□ 1.44
ACAD9-201ENST00000308982 POLA1P09884 1462 aaPredicted RBP24.02■■□□□ 1.44
ACAD9-201ENST00000308982 TIAM1Q13009 1591 aa23.97■■□□□ 1.43
ACAD9-201ENST00000308982 CCNB3Q8WWL7 1395 aa23.97■■□□□ 1.43
ACAD9-201ENST00000308982 ABCA10Q8WWZ4 1543 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms