RNA–Protein interactions for RNA: ENST00000334869.8

LGMN-201, Transcript of legumain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LGMN, Length 2,055 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGMN-201ENST00000334869 NISCHQ9Y2I1 1504 aa39.36■■■■□ 3.89
LGMN-201ENST00000334869 CCDC180Q9P1Z9 1646 aa34.2■■■■□ 3.07
LGMN-201ENST00000334869 ZCCHC6Q5VYS8 1495 aaKnown RBP33.07■■■□□ 2.88
LGMN-201ENST00000334869 DCAF8L2P0C7V8 631 aa32.7■■■□□ 2.83
LGMN-201ENST00000334869 ABCC9O60706 1549 aa32.49■■■□□ 2.79
LGMN-201ENST00000334869 DCAF1Q9Y4B6 1507 aa32.45■■■□□ 2.79
LGMN-201ENST00000334869 SHROOM4Q9ULL8 1493 aa32.36■■■□□ 2.77
LGMN-201ENST00000334869 MYO15BQ96JP2 1530 aa32.02■■■□□ 2.72
LGMN-201ENST00000334869 NACADO15069 1562 aa31.87■■■□□ 2.69
LGMN-201ENST00000334869 SCRIBQ14160 1630 aa31.62■■■□□ 2.65
LGMN-201ENST00000334869 RB1CC1Q8TDY2 1594 aa31.62■■■□□ 2.65
LGMN-201ENST00000334869 SUPT5HO00267 1087 aaKnown RBP31.15■■■□□ 2.58
LGMN-201ENST00000334869 UNC13AQ9UPW8 1703 aa30.99■■■□□ 2.55
LGMN-201ENST00000334869 PABPN1Q86U42 306 aaKnown RBP eCLIP30.7■■■□□ 2.51
LGMN-201ENST00000334869 BICRAQ9NZM4 1560 aa30.69■■■□□ 2.5
LGMN-201ENST00000334869 CECR2Q9BXF3 1484 aa30.66■■■□□ 2.5
LGMN-201ENST00000334869 RSF1Q96T23 1441 aaPredicted RBP30.6■■■□□ 2.49
LGMN-201ENST00000334869 MROH2BQ7Z745 1585 aa30.47■■■□□ 2.47
LGMN-201ENST00000334869 BAZ1AQ9NRL2 1556 aaPredicted RBP30.37■■■□□ 2.45
LGMN-201ENST00000334869 SMARCA4P51532 1647 aa30.24■■■□□ 2.43
LGMN-201ENST00000334869 WIZO95785 1651 aa30.22■■■□□ 2.43
LGMN-201ENST00000334869 TOP2AP11388 1531 aaKnown RBP29.85■■■□□ 2.37
LGMN-201ENST00000334869 PEG3Q9GZU2 1588 aa29.81■■■□□ 2.36
LGMN-201ENST00000334869 EIF4G1Q04637 1599 aaKnown RBP29.77■■■□□ 2.36
LGMN-201ENST00000334869 CHIC1Q5VXU3 224 aa29.77■■■□□ 2.36
LGMN-201ENST00000334869 ATAD2BQ9ULI0 1458 aa29.75■■■□□ 2.35
LGMN-201ENST00000334869 SMARCA2P51531 1590 aa29.69■■■□□ 2.34
LGMN-201ENST00000334869 CCDC88BA6NC98 1476 aa29.6■■■□□ 2.33
LGMN-201ENST00000334869 BAZ1BQ9UIG0 1483 aaKnown RBP29.6■■■□□ 2.33
LGMN-201ENST00000334869 NCAPD3P42695 1498 aa29.45■■■□□ 2.3
LGMN-201ENST00000334869 HMGXB3Q12766 1538 aa29.39■■■□□ 2.29
LGMN-201ENST00000334869 CC2D2AQ9P2K1 1620 aa29.33■■■□□ 2.29
LGMN-201ENST00000334869 TRIM41Q8WV44 630 aa29.22■■■□□ 2.27
LGMN-201ENST00000334869 ABCC8Q09428 1581 aa29.04■■■□□ 2.24
LGMN-201ENST00000334869 CFTRP13569 1480 aa28.83■■■□□ 2.2
LGMN-201ENST00000334869 WRNQ14191 1432 aaPredicted RBP eCLIP28.8■■■□□ 2.2
LGMN-201ENST00000334869 FAM9AQ8IZU1 332 aaPredicted RBP28.79■■■□□ 2.2
LGMN-201ENST00000334869 CADPSQ9ULU8 1353 aa28.74■■■□□ 2.19
LGMN-201ENST00000334869 LOC105371045A0A1W2PR82 267 aa28.72■■■□□ 2.19
LGMN-201ENST00000334869 DNAJC5BQ9UF47 199 aa28.71■■■□□ 2.19
LGMN-201ENST00000334869 SYNJ1O43426 1573 aa28.69■■■□□ 2.18
LGMN-201ENST00000334869 PRDM2Q13029 1718 aa28.6■■■□□ 2.17
LGMN-201ENST00000334869 NESP48681 1621 aa28.54■■■□□ 2.16
LGMN-201ENST00000334869 SOGA1O94964 1423 aa28.52■■■□□ 2.16
LGMN-201ENST00000334869 TOP2BQ02880 1626 aa28.51■■■□□ 2.15
LGMN-201ENST00000334869 CUX1P39880 1505 aa28.47■■■□□ 2.15
LGMN-201ENST00000334869 EHMT2Q96KQ7 1210 aa28.46■■■□□ 2.15
LGMN-201ENST00000334869 BIVM-ERCC5R4GMW8 1640 aa28.46■■■□□ 2.15
LGMN-201ENST00000334869 FANCD2Q9BXW9 1451 aa28.44■■■□□ 2.14
LGMN-201ENST00000334869 LAMC3Q9Y6N6 1575 aa28.42■■■□□ 2.14
LGMN-201ENST00000334869 RUSC2Q8N2Y8 1516 aa28.42■■■□□ 2.14
LGMN-201ENST00000334869 EEA1Q15075 1411 aa28.35■■■□□ 2.13
LGMN-201ENST00000334869 CSRNP3Q8WYN3 585 aa28.28■■■□□ 2.12
LGMN-201ENST00000334869 CEP164Q9UPV0 1460 aa28.25■■■□□ 2.11
LGMN-201ENST00000334869 PDS5BQ9NTI5 1447 aa28.24■■■□□ 2.11
LGMN-201ENST00000334869 FGD5Q6ZNL6 1462 aa28.16■■■□□ 2.1
LGMN-201ENST00000334869 DNMBPQ6XZF7 1577 aa28.15■■■□□ 2.1
LGMN-201ENST00000334869 TOPBP1Q92547 1522 aa28.13■■■□□ 2.09
LGMN-201ENST00000334869 KIF21AQ7Z4S6 1674 aa28.12■■■□□ 2.09
LGMN-201ENST00000334869 URB2Q14146 1524 aaKnown RBP28.09■■■□□ 2.09
LGMN-201ENST00000334869 KIF27Q86VH2 1401 aa28.06■■■□□ 2.08
LGMN-201ENST00000334869 GOLGA3Q08378 1498 aa28.02■■■□□ 2.08
LGMN-201ENST00000334869 CUX2O14529 1486 aa28.01■■■□□ 2.07
LGMN-201ENST00000334869 POLA1P09884 1462 aaPredicted RBP28■■■□□ 2.07
LGMN-201ENST00000334869 UBTFP17480 764 aaKnown RBP27.99■■■□□ 2.07
LGMN-201ENST00000334869 KIF21BO75037 1637 aa27.99■■■□□ 2.07
LGMN-201ENST00000334869 RAD54L2Q9Y4B4 1467 aa27.96■■■□□ 2.07
LGMN-201ENST00000334869 TNIKQ9UKE5 1360 aa27.94■■■□□ 2.06
LGMN-201ENST00000334869 RAPGEF2Q9Y4G8 1499 aa27.91■■■□□ 2.06
LGMN-201ENST00000334869 MRC2Q9UBG0 1479 aa27.88■■■□□ 2.05
LGMN-201ENST00000334869 ABCA10Q8WWZ4 1543 aa27.86■■■□□ 2.05
LGMN-201ENST00000334869 PRXQ9BXM0 1461 aa27.86■■■□□ 2.05
LGMN-201ENST00000334869 CEP162Q5TB80 1403 aa27.84■■■□□ 2.05
LGMN-201ENST00000334869 ERCC6Q03468 1493 aa27.83■■■□□ 2.05
LGMN-201ENST00000334869 IGF1RP08069 1367 aa27.82■■■□□ 2.04
LGMN-201ENST00000334869 ERICH3Q5RHP9 1530 aa27.78■■■□□ 2.04
LGMN-201ENST00000334869 WDR97A6NE52 1622 aa27.74■■■□□ 2.03
LGMN-201ENST00000334869 WDR62O43379 1518 aa27.71■■■□□ 2.03
LGMN-201ENST00000334869 TDRD9Q8NDG6 1382 aaKnown RBP27.7■■■□□ 2.03
LGMN-201ENST00000334869 CARMIL1Q5VZK9 1371 aa27.69■■■□□ 2.02
LGMN-201ENST00000334869 TARBP1Q13395 1621 aaKnown RBP27.67■■■□□ 2.02
LGMN-201ENST00000334869 RANGAP1P46060 587 aaPredicted RBP27.63■■■□□ 2.01
LGMN-201ENST00000334869 ABCA5Q8WWZ7 1642 aa27.63■■■□□ 2.01
LGMN-201ENST00000334869 THOC2Q8NI27 1593 aaKnown RBP27.62■■■□□ 2.01
LGMN-201ENST00000334869 GAPVD1Q14C86 1478 aa27.61■■■□□ 2.01
LGMN-201ENST00000334869 CLIP1P30622 1438 aa27.6■■■□□ 2.01
LGMN-201ENST00000334869 IFT140Q96RY7 1462 aa27.53■■■□□ 2
LGMN-201ENST00000334869 CUL7Q14999 1698 aa27.53■■■□□ 2
LGMN-201ENST00000334869 AQRO60306 1485 aaKnown RBP eCLIP27.51■■□□□ 1.99
LGMN-201ENST00000334869 ZNF608Q9ULD9 1512 aaPredicted RBP27.46■■□□□ 1.99
LGMN-201ENST00000334869 PCGF6Q9BYE7 350 aa27.45■■□□□ 1.99
LGMN-201ENST00000334869 PPARGC1BQ86YN6 1023 aaKnown RBP27.44■■□□□ 1.98
LGMN-201ENST00000334869 PBRM1Q86U86 1689 aa27.41■■□□□ 1.98
LGMN-201ENST00000334869 GRIN2BQ13224 1484 aa27.36■■□□□ 1.97
LGMN-201ENST00000334869 TRIM26Q12899 539 aaPredicted RBP27.36■■□□□ 1.97
LGMN-201ENST00000334869 VPS8Q8N3P4 1428 aa27.34■■□□□ 1.97
LGMN-201ENST00000334869 ARAP1Q96P48 1450 aa27.32■■□□□ 1.96
LGMN-201ENST00000334869 EIF4G3O43432 1585 aaKnown RBP27.32■■□□□ 1.96
LGMN-201ENST00000334869 ARHGAP35Q9NRY4 1499 aa27.3■■□□□ 1.96
LGMN-201ENST00000334869 FHAD1B1AJZ9 1412 aa27.29■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms