RNA–Protein interactions for RNA: ENST00000436764.5

SNHG17-206, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 5 BASIC

Gene SNHG17, Length 973 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-206ENST00000436764 NISCHQ9Y2I1 1504 aa41.12■■■■■ 4.17
SNHG17-206ENST00000436764 CCDC180Q9P1Z9 1646 aa36.68■■■■□ 3.46
SNHG17-206ENST00000436764 ABCC9O60706 1549 aa35.47■■■■□ 3.27
SNHG17-206ENST00000436764 RB1CC1Q8TDY2 1594 aa34.4■■■■□ 3.1
SNHG17-206ENST00000436764 NACADO15069 1562 aa34.38■■■■□ 3.09
SNHG17-206ENST00000436764 ZCCHC6Q5VYS8 1495 aaKnown RBP34.27■■■■□ 3.08
SNHG17-206ENST00000436764 MYO15BQ96JP2 1530 aa34.25■■■■□ 3.07
SNHG17-206ENST00000436764 DCAF8L2P0C7V8 631 aa34.18■■■■□ 3.06
SNHG17-206ENST00000436764 DCAF1Q9Y4B6 1507 aa34.13■■■■□ 3.05
SNHG17-206ENST00000436764 UNC13AQ9UPW8 1703 aa33.62■■■□□ 2.97
SNHG17-206ENST00000436764 SCRIBQ14160 1630 aa33.29■■■□□ 2.92
SNHG17-206ENST00000436764 BICRAQ9NZM4 1560 aa33.2■■■□□ 2.91
SNHG17-206ENST00000436764 SHROOM4Q9ULL8 1493 aa33.08■■■□□ 2.89
SNHG17-206ENST00000436764 PABPN1Q86U42 306 aaKnown RBP eCLIP33.08■■■□□ 2.89
SNHG17-206ENST00000436764 EIF4G1Q04637 1599 aaKnown RBP32.36■■■□□ 2.77
SNHG17-206ENST00000436764 DNAJC5BQ9UF47 199 aa32.25■■■□□ 2.75
SNHG17-206ENST00000436764 CC2D2AQ9P2K1 1620 aa32.19■■■□□ 2.74
SNHG17-206ENST00000436764 BAZ1AQ9NRL2 1556 aaPredicted RBP31.94■■■□□ 2.7
SNHG17-206ENST00000436764 SMARCA4P51532 1647 aa31.92■■■□□ 2.7
SNHG17-206ENST00000436764 CECR2Q9BXF3 1484 aa31.91■■■□□ 2.7
SNHG17-206ENST00000436764 SMARCA2P51531 1590 aa31.73■■■□□ 2.67
SNHG17-206ENST00000436764 NCAPD3P42695 1498 aa31.63■■■□□ 2.65
SNHG17-206ENST00000436764 ATAD2BQ9ULI0 1458 aa31.63■■■□□ 2.65
SNHG17-206ENST00000436764 PEG3Q9GZU2 1588 aa31.63■■■□□ 2.65
SNHG17-206ENST00000436764 MROH2BQ7Z745 1585 aa31.61■■■□□ 2.65
SNHG17-206ENST00000436764 HMGXB3Q12766 1538 aa31.56■■■□□ 2.64
SNHG17-206ENST00000436764 BAZ1BQ9UIG0 1483 aaKnown RBP31.44■■■□□ 2.62
SNHG17-206ENST00000436764 WIZO95785 1651 aa31.35■■■□□ 2.61
SNHG17-206ENST00000436764 RSF1Q96T23 1441 aaPredicted RBP31.3■■■□□ 2.6
SNHG17-206ENST00000436764 TOP2AP11388 1531 aaKnown RBP31.06■■■□□ 2.56
SNHG17-206ENST00000436764 LAMC3Q9Y6N6 1575 aa30.88■■■□□ 2.53
SNHG17-206ENST00000436764 NESP48681 1621 aa30.7■■■□□ 2.51
SNHG17-206ENST00000436764 CADPSQ9ULU8 1353 aa30.69■■■□□ 2.5
SNHG17-206ENST00000436764 ERCC6Q03468 1493 aa30.68■■■□□ 2.5
SNHG17-206ENST00000436764 PDS5BQ9NTI5 1447 aa30.62■■■□□ 2.49
SNHG17-206ENST00000436764 CCDC88BA6NC98 1476 aa30.61■■■□□ 2.49
SNHG17-206ENST00000436764 PRDM2Q13029 1718 aa30.59■■■□□ 2.49
SNHG17-206ENST00000436764 SUPT5HO00267 1087 aaKnown RBP30.56■■■□□ 2.48
SNHG17-206ENST00000436764 CFTRP13569 1480 aa30.55■■■□□ 2.48
SNHG17-206ENST00000436764 KIF21AQ7Z4S6 1674 aa30.52■■■□□ 2.48
SNHG17-206ENST00000436764 FANCD2Q9BXW9 1451 aa30.35■■■□□ 2.45
SNHG17-206ENST00000436764 CEP164Q9UPV0 1460 aa30.35■■■□□ 2.45
SNHG17-206ENST00000436764 THOC2Q8NI27 1593 aaKnown RBP30.35■■■□□ 2.45
SNHG17-206ENST00000436764 CUX2O14529 1486 aa30.34■■■□□ 2.45
SNHG17-206ENST00000436764 MRC2Q9UBG0 1479 aa30.25■■■□□ 2.43
SNHG17-206ENST00000436764 WDR62O43379 1518 aa30.17■■■□□ 2.42
SNHG17-206ENST00000436764 ABCC8Q09428 1581 aa30.04■■■□□ 2.4
SNHG17-206ENST00000436764 URB2Q14146 1524 aaKnown RBP29.98■■■□□ 2.39
SNHG17-206ENST00000436764 DNMBPQ6XZF7 1577 aa29.93■■■□□ 2.38
SNHG17-206ENST00000436764 TOPBP1Q92547 1522 aa29.88■■■□□ 2.37
SNHG17-206ENST00000436764 IFT140Q96RY7 1462 aa29.71■■■□□ 2.35
SNHG17-206ENST00000436764 CUX1P39880 1505 aa29.67■■■□□ 2.34
SNHG17-206ENST00000436764 POLA1P09884 1462 aaPredicted RBP29.61■■■□□ 2.33
SNHG17-206ENST00000436764 BIVM-ERCC5R4GMW8 1640 aa29.6■■■□□ 2.33
SNHG17-206ENST00000436764 WRNQ14191 1432 aaPredicted RBP eCLIP29.58■■■□□ 2.33
SNHG17-206ENST00000436764 TARBP1Q13395 1621 aaKnown RBP29.57■■■□□ 2.32
SNHG17-206ENST00000436764 FGD5Q6ZNL6 1462 aa29.57■■■□□ 2.32
SNHG17-206ENST00000436764 TOP2BQ02880 1626 aa29.56■■■□□ 2.32
SNHG17-206ENST00000436764 WDR97A6NE52 1622 aa29.53■■■□□ 2.32
SNHG17-206ENST00000436764 SOGA1O94964 1423 aa29.52■■■□□ 2.32
SNHG17-206ENST00000436764 SYNJ1O43426 1573 aa29.47■■■□□ 2.31
SNHG17-206ENST00000436764 EIF4G3O43432 1585 aaKnown RBP29.45■■■□□ 2.31
SNHG17-206ENST00000436764 RAD54L2Q9Y4B4 1467 aa29.42■■■□□ 2.3
SNHG17-206ENST00000436764 ZNF608Q9ULD9 1512 aaPredicted RBP29.41■■■□□ 2.3
SNHG17-206ENST00000436764 ABCA10Q8WWZ4 1543 aa29.34■■■□□ 2.29
SNHG17-206ENST00000436764 AQRO60306 1485 aaKnown RBP eCLIP29.28■■■□□ 2.285e-7■■■■■ 27.6
SNHG17-206ENST00000436764 TDRD9Q8NDG6 1382 aaKnown RBP29.25■■■□□ 2.27
SNHG17-206ENST00000436764 PBRM1Q86U86 1689 aa29.25■■■□□ 2.27
SNHG17-206ENST00000436764 ABCA5Q8WWZ7 1642 aa29.23■■■□□ 2.27
SNHG17-206ENST00000436764 GAPVD1Q14C86 1478 aa29.2■■■□□ 2.26
SNHG17-206ENST00000436764 GRIN2BQ13224 1484 aa29.19■■■□□ 2.26
SNHG17-206ENST00000436764 MAGI1Q96QZ7 1491 aaPredicted RBP29.14■■■□□ 2.26
SNHG17-206ENST00000436764 DNAJC5Q9H3Z4 198 aa29.11■■■□□ 2.25
SNHG17-206ENST00000436764 CHD1O14646 1710 aa29.11■■■□□ 2.25
SNHG17-206ENST00000436764 SNAPC4Q5SXM2 1469 aa29.08■■■□□ 2.25
SNHG17-206ENST00000436764 OSCARQ8IYS5 282 aa29.05■■■□□ 2.24
SNHG17-206ENST00000436764 ERICH3Q5RHP9 1530 aa29.04■■■□□ 2.24
SNHG17-206ENST00000436764 SYNJ2O15056 1496 aa28.99■■■□□ 2.23
SNHG17-206ENST00000436764 KIF27Q86VH2 1401 aa28.99■■■□□ 2.23
SNHG17-206ENST00000436764 TRIM41Q8WV44 630 aa28.96■■■□□ 2.23
SNHG17-206ENST00000436764 ADAMTS12P58397 1594 aa28.93■■■□□ 2.22
SNHG17-206ENST00000436764 FBLN2P98095 1184 aa28.93■■■□□ 2.22
SNHG17-206ENST00000436764 CHMP7Q8WUX9 453 aaPredicted RBP28.93■■■□□ 2.22
SNHG17-206ENST00000436764 CUL7Q14999 1698 aa28.89■■■□□ 2.21
SNHG17-206ENST00000436764 FHAD1B1AJZ9 1412 aa28.88■■■□□ 2.21
SNHG17-206ENST00000436764 GRIN2AQ12879 1464 aa28.8■■■□□ 2.2
SNHG17-206ENST00000436764 IGF1RP08069 1367 aa28.74■■■□□ 2.19
SNHG17-206ENST00000436764 CLASP1Q7Z460 1538 aa28.71■■■□□ 2.19
SNHG17-206ENST00000436764 NUP160Q12769 1436 aa28.64■■■□□ 2.18
SNHG17-206ENST00000436764 CARMIL1Q5VZK9 1371 aa28.62■■■□□ 2.17
SNHG17-206ENST00000436764 CEP170Q5SW79 1584 aa28.62■■■□□ 2.17
SNHG17-206ENST00000436764 EEA1Q15075 1411 aa28.61■■■□□ 2.17
SNHG17-206ENST00000436764 CHIC1Q5VXU3 224 aa28.61■■■□□ 2.17
SNHG17-206ENST00000436764 RUSC2Q8N2Y8 1516 aa28.59■■■□□ 2.17
SNHG17-206ENST00000436764 RIMBP3CA6NJZ7 1639 aa28.58■■■□□ 2.17
SNHG17-206ENST00000436764 RIMBP3BA6NNM3 1639 aa28.58■■■□□ 2.17
SNHG17-206ENST00000436764 RIMBP3Q9UFD9 1639 aa28.58■■■□□ 2.17
SNHG17-206ENST00000436764 ARHGEF11O15085 1522 aa28.56■■■□□ 2.16
SNHG17-206ENST00000436764 RAPGEF2Q9Y4G8 1499 aa28.53■■■□□ 2.16
SNHG17-206ENST00000436764 SHROOM2Q13796 1616 aa28.49■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms