RNA–Protein interactions for RNA: ENST00000301318.7

ZFP28-201, Transcript of ZFP28 zinc finger protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZFP28, Length 4,096 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZFP28-201ENST00000301318 NISCHQ9Y2I1 1504 aa30.92■■■□□ 2.54
ZFP28-201ENST00000301318 DCAF8L2P0C7V8 631 aa29.23■■■□□ 2.27
ZFP28-201ENST00000301318 SHROOM4Q9ULL8 1493 aa28.67■■■□□ 2.18
ZFP28-201ENST00000301318 SUPT5HO00267 1087 aaKnown RBP28.54■■■□□ 2.16
ZFP28-201ENST00000301318 EHMT2Q96KQ7 1210 aa27.2■■□□□ 1.94
ZFP28-201ENST00000301318 FAM9AQ8IZU1 332 aaPredicted RBP26.74■■□□□ 1.87
ZFP28-201ENST00000301318 PCGF6Q9BYE7 350 aa26.65■■□□□ 1.86
ZFP28-201ENST00000301318 CHIC1Q5VXU3 224 aa26.38■■□□□ 1.81
ZFP28-201ENST00000301318 LOC105371045A0A1W2PR82 267 aa26.27■■□□□ 1.8
ZFP28-201ENST00000301318 TRIM41Q8WV44 630 aa26.22■■□□□ 1.79
ZFP28-201ENST00000301318 TTBK1Q5TCY1 1321 aaPredicted RBP26.19■■□□□ 1.78
ZFP28-201ENST00000301318 PPARGC1BQ86YN6 1023 aaKnown RBP25.97■■□□□ 1.75
ZFP28-201ENST00000301318 ZCCHC6Q5VYS8 1495 aaKnown RBP25.82■■□□□ 1.72
ZFP28-201ENST00000301318 ABCC9O60706 1549 aa25.78■■□□□ 1.72
ZFP28-201ENST00000301318 RANGAP1P46060 587 aaPredicted RBP25.77■■□□□ 1.72
ZFP28-201ENST00000301318 HRCP23327 699 aa25.66■■□□□ 1.7
ZFP28-201ENST00000301318 UBTFP17480 764 aaKnown RBP25.48■■□□□ 1.67
ZFP28-201ENST00000301318 TRIM26Q12899 539 aaPredicted RBP25.48■■□□□ 1.67
ZFP28-201ENST00000301318 PABPN1Q86U42 306 aaKnown RBP eCLIP25.38■■□□□ 1.65
ZFP28-201ENST00000301318 CCER1Q8TC90 406 aaPredicted RBP25.37■■□□□ 1.65
ZFP28-201ENST00000301318 CCDC180Q9P1Z9 1646 aa25.36■■□□□ 1.65
ZFP28-201ENST00000301318 MYO15BQ96JP2 1530 aa25.34■■□□□ 1.65
ZFP28-201ENST00000301318 APLP2Q06481 763 aa25.33■■□□□ 1.65
ZFP28-201ENST00000301318 SCRIBQ14160 1630 aa25.24■■□□□ 1.63
ZFP28-201ENST00000301318 ZEB1P37275 1124 aaPredicted RBP25.11■■□□□ 1.61
ZFP28-201ENST00000301318 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.02■■□□□ 1.6
ZFP28-201ENST00000301318 ATP1B4Q9UN42 357 aaPredicted RBP24.92■■□□□ 1.58
ZFP28-201ENST00000301318 HNRNPUL2Q1KMD3 747 aaKnown RBP24.86■■□□□ 1.57
ZFP28-201ENST00000301318 RSF1Q96T23 1441 aaPredicted RBP24.82■■□□□ 1.56
ZFP28-201ENST00000301318 YTHDC1Q96MU7 727 aaKnown RBP24.74■■□□□ 1.55
ZFP28-201ENST00000301318 ITGAEP38570 1179 aa24.7■■□□□ 1.54
ZFP28-201ENST00000301318 CECR2Q9BXF3 1484 aa24.58■■□□□ 1.53
ZFP28-201ENST00000301318 DCAF1Q9Y4B6 1507 aa24.57■■□□□ 1.52
ZFP28-201ENST00000301318 CSRNP3Q8WYN3 585 aa24.5■■□□□ 1.51
ZFP28-201ENST00000301318 CENPBP07199 599 aaPredicted RBP24.47■■□□□ 1.51
ZFP28-201ENST00000301318 DIEXFQ68CQ4 756 aaKnown RBP24.33■■□□□ 1.48
ZFP28-201ENST00000301318 RB1CC1Q8TDY2 1594 aa24.32■■□□□ 1.48
ZFP28-201ENST00000301318 MROH2BQ7Z745 1585 aa24.23■■□□□ 1.47
ZFP28-201ENST00000301318 NACADO15069 1562 aa24.2■■□□□ 1.46
ZFP28-201ENST00000301318 P3H3Q8IVL6 736 aa24.12■■□□□ 1.45
ZFP28-201ENST00000301318 FAM50AQ14320 339 aaKnown RBP24.04■■□□□ 1.44
ZFP28-201ENST00000301318 WIZO95785 1651 aa23.96■■□□□ 1.43
ZFP28-201ENST00000301318 SOGA1O94964 1423 aa23.95■■□□□ 1.42
ZFP28-201ENST00000301318 ABCC8Q09428 1581 aa23.93■■□□□ 1.42
ZFP28-201ENST00000301318 CEP162Q5TB80 1403 aa23.92■■□□□ 1.42
ZFP28-201ENST00000301318 NEUROD1Q13562 356 aa23.91■■□□□ 1.42
ZFP28-201ENST00000301318 BAZ1AQ9NRL2 1556 aaPredicted RBP23.9■■□□□ 1.42
ZFP28-201ENST00000301318 ZNF316A6NFI3 1004 aaPredicted RBP23.89■■□□□ 1.41
ZFP28-201ENST00000301318 GTF3C3Q9Y5Q9 886 aa23.89■■□□□ 1.41
ZFP28-201ENST00000301318 CCDC88BA6NC98 1476 aa23.85■■□□□ 1.41
ZFP28-201ENST00000301318 PELP1Q8IZL8 1130 aaKnown RBP23.84■■□□□ 1.41
ZFP28-201ENST00000301318 ARID3CA6NKF2 412 aa23.83■■□□□ 1.41
ZFP28-201ENST00000301318 WRNQ14191 1432 aaPredicted RBP eCLIP23.83■■□□□ 1.41
ZFP28-201ENST00000301318 CNGB1Q14028 1251 aaPredicted RBP23.82■■□□□ 1.4
ZFP28-201ENST00000301318 CLIP1P30622 1438 aa23.76■■□□□ 1.39
ZFP28-201ENST00000301318 ACIN1Q9UKV3 1341 aaKnown RBP23.7■■□□□ 1.39
ZFP28-201ENST00000301318 BAZ1BQ9UIG0 1483 aaKnown RBP23.68■■□□□ 1.38
ZFP28-201ENST00000301318 TNIKQ9UKE5 1360 aa23.66■■□□□ 1.38
ZFP28-201ENST00000301318 POLR3GLQ9BT43 218 aa23.66■■□□□ 1.38
ZFP28-201ENST00000301318 SCAF1Q9H7N4 1312 aaKnown RBP23.65■■□□□ 1.38
ZFP28-201ENST00000301318 GOLGA3Q08378 1498 aa23.64■■□□□ 1.37
ZFP28-201ENST00000301318 RUSC2Q8N2Y8 1516 aa23.61■■□□□ 1.37
ZFP28-201ENST00000301318 TRIM52Q96A61 297 aa23.56■■□□□ 1.36
ZFP28-201ENST00000301318 MIER1Q8N108 512 aa23.54■■□□□ 1.36
ZFP28-201ENST00000301318 EEA1Q15075 1411 aa23.53■■□□□ 1.36
ZFP28-201ENST00000301318 FBLN2P98095 1184 aa23.52■■□□□ 1.36
ZFP28-201ENST00000301318 NEFLP07196 543 aa23.5■■□□□ 1.35
ZFP28-201ENST00000301318 BCANQ96GW7 911 aa23.46■■□□□ 1.35
ZFP28-201ENST00000301318 HIRIP3Q9BW71 556 aaPredicted RBP23.45■■□□□ 1.34
ZFP28-201ENST00000301318 TOP2AP11388 1531 aaKnown RBP23.45■■□□□ 1.34
ZFP28-201ENST00000301318 CEP164Q9UPV0 1460 aa23.44■■□□□ 1.34
ZFP28-201ENST00000301318 SMARCA4P51532 1647 aa23.38■■□□□ 1.33
ZFP28-201ENST00000301318 KANK4Q5T7N3 995 aaPredicted RBP23.37■■□□□ 1.33
ZFP28-201ENST00000301318 CHIC2Q9UKJ5 165 aa23.34■■□□□ 1.33
ZFP28-201ENST00000301318 DDX10Q13206 875 aaKnown RBP23.33■■□□□ 1.32
ZFP28-201ENST00000301318 ZNF326Q5BKZ1 582 aaKnown RBP23.32■■□□□ 1.32
ZFP28-201ENST00000301318 KIF27Q86VH2 1401 aa23.27■■□□□ 1.32
ZFP28-201ENST00000301318 ATAD2BQ9ULI0 1458 aa23.23■■□□□ 1.31
ZFP28-201ENST00000301318 SMARCA2P51531 1590 aa23.23■■□□□ 1.31
ZFP28-201ENST00000301318 ZNF777Q9ULD5 760 aaPredicted RBP23.22■■□□□ 1.31
ZFP28-201ENST00000301318 RAPGEF2Q9Y4G8 1499 aa23.22■■□□□ 1.31
ZFP28-201ENST00000301318 MYT1LQ9UL68 1186 aa23.2■■□□□ 1.3
ZFP28-201ENST00000301318 VPS8Q8N3P4 1428 aa23.18■■□□□ 1.3
ZFP28-201ENST00000301318 SIN3AQ96ST3 1273 aa23.17■■□□□ 1.3
ZFP28-201ENST00000301318 ANP32CO43423 234 aa23.17■■□□□ 1.3
ZFP28-201ENST00000301318 CUX2O14529 1486 aa23.15■■□□□ 1.3
ZFP28-201ENST00000301318 RRP7BPQ9NSQ0 103 aa23.1■■□□□ 1.29
ZFP28-201ENST00000301318 MTUS2Q5JR59 1369 aa23.1■■□□□ 1.29
ZFP28-201ENST00000301318 ERICH6Q7L0X2 663 aa23.07■■□□□ 1.28
ZFP28-201ENST00000301318 CARMIL1Q5VZK9 1371 aa23.06■■□□□ 1.28
ZFP28-201ENST00000301318 TONSLQ96HA7 1378 aa23.06■■□□□ 1.28
ZFP28-201ENST00000301318 CCNB3Q8WWL7 1395 aa23■■□□□ 1.27
ZFP28-201ENST00000301318 FKBP8Q14318 412 aa22.93■■□□□ 1.26
ZFP28-201ENST00000301318 TDRD9Q8NDG6 1382 aaKnown RBP22.91■■□□□ 1.26
ZFP28-201ENST00000301318 SENP3-EIF4A1A0A087X0R7 540 aa22.87■■□□□ 1.25
ZFP28-201ENST00000301318 SYNJ1O43426 1573 aa22.85■■□□□ 1.25
ZFP28-201ENST00000301318 HNRNPUQ00839 825 aaKnown RBP eCLIP22.85■■□□□ 1.25
ZFP28-201ENST00000301318 CDK11AQ9UQ88 783 aaPredicted RBP22.83■■□□□ 1.24
ZFP28-201ENST00000301318 FAM9BQ8IZU0 186 aa22.82■■□□□ 1.24
ZFP28-201ENST00000301318 CADPSQ9ULU8 1353 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms