RNA–Protein interactions for RNA: ENST00000369802.7

CSF1-204, Transcript of colony stimulating factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSF1, Length 2,484 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1-204ENST00000369802 NISCHQ9Y2I1 1504 aa37.49■■■■□ 3.59
CSF1-204ENST00000369802 CCDC180Q9P1Z9 1646 aa32.41■■■□□ 2.78
CSF1-204ENST00000369802 ZCCHC6Q5VYS8 1495 aaKnown RBP31.61■■■□□ 2.65
CSF1-204ENST00000369802 SHROOM4Q9ULL8 1493 aa31.1■■■□□ 2.57
CSF1-204ENST00000369802 DCAF1Q9Y4B6 1507 aa30.94■■■□□ 2.54
CSF1-204ENST00000369802 DCAF8L2P0C7V8 631 aa30.84■■■□□ 2.53
CSF1-204ENST00000369802 MYO15BQ96JP2 1530 aa30.32■■■□□ 2.44
CSF1-204ENST00000369802 SUPT5HO00267 1087 aaKnown RBP30.19■■■□□ 2.42
CSF1-204ENST00000369802 ABCC9O60706 1549 aa30.19■■■□□ 2.42
CSF1-204ENST00000369802 NACADO15069 1562 aa30.02■■■□□ 2.4
CSF1-204ENST00000369802 SCRIBQ14160 1630 aa29.98■■■□□ 2.39
CSF1-204ENST00000369802 RB1CC1Q8TDY2 1594 aa29.64■■■□□ 2.34
CSF1-204ENST00000369802 RSF1Q96T23 1441 aaPredicted RBP29.32■■■□□ 2.28
CSF1-204ENST00000369802 UNC13AQ9UPW8 1703 aa29.23■■■□□ 2.27
CSF1-204ENST00000369802 CHIC1Q5VXU3 224 aa29.17■■■□□ 2.26
CSF1-204ENST00000369802 CECR2Q9BXF3 1484 aa29.14■■■□□ 2.26
CSF1-204ENST00000369802 MROH2BQ7Z745 1585 aa29.03■■■□□ 2.24
CSF1-204ENST00000369802 BAZ1AQ9NRL2 1556 aaPredicted RBP28.89■■■□□ 2.21
CSF1-204ENST00000369802 WIZO95785 1651 aa28.88■■■□□ 2.21
CSF1-204ENST00000369802 BICRAQ9NZM4 1560 aa28.8■■■□□ 2.2
CSF1-204ENST00000369802 SMARCA4P51532 1647 aa28.73■■■□□ 2.19
CSF1-204ENST00000369802 PABPN1Q86U42 306 aaKnown RBP eCLIP28.59■■■□□ 2.17
CSF1-204ENST00000369802 TOP2AP11388 1531 aaKnown RBP28.5■■■□□ 2.15
CSF1-204ENST00000369802 EIF4G1Q04637 1599 aaKnown RBP28.32■■■□□ 2.12
CSF1-204ENST00000369802 PEG3Q9GZU2 1588 aa28.3■■■□□ 2.12
CSF1-204ENST00000369802 SMARCA2P51531 1590 aa28.3■■■□□ 2.12
CSF1-204ENST00000369802 TRIM41Q8WV44 630 aa28.29■■■□□ 2.12
CSF1-204ENST00000369802 CCDC88BA6NC98 1476 aa28.25■■■□□ 2.11
CSF1-204ENST00000369802 LOC105371045A0A1W2PR82 267 aa28.14■■■□□ 2.09
CSF1-204ENST00000369802 ATAD2BQ9ULI0 1458 aa28.07■■■□□ 2.08
CSF1-204ENST00000369802 BAZ1BQ9UIG0 1483 aaKnown RBP27.96■■■□□ 2.07
CSF1-204ENST00000369802 ABCC8Q09428 1581 aa27.91■■■□□ 2.06
CSF1-204ENST00000369802 FAM9AQ8IZU1 332 aaPredicted RBP27.86■■■□□ 2.05
CSF1-204ENST00000369802 HMGXB3Q12766 1538 aa27.72■■■□□ 2.03
CSF1-204ENST00000369802 NCAPD3P42695 1498 aa27.69■■■□□ 2.02
CSF1-204ENST00000369802 WRNQ14191 1432 aaPredicted RBP eCLIP27.57■■■□□ 2
CSF1-204ENST00000369802 EHMT2Q96KQ7 1210 aa27.5■■□□□ 1.99
CSF1-204ENST00000369802 SYNJ1O43426 1573 aa27.5■■□□□ 1.99
CSF1-204ENST00000369802 SOGA1O94964 1423 aa27.47■■□□□ 1.99
CSF1-204ENST00000369802 PCGF6Q9BYE7 350 aa27.46■■□□□ 1.99
CSF1-204ENST00000369802 EEA1Q15075 1411 aa27.43■■□□□ 1.98
CSF1-204ENST00000369802 RUSC2Q8N2Y8 1516 aa27.36■■□□□ 1.97
CSF1-204ENST00000369802 CC2D2AQ9P2K1 1620 aa27.33■■□□□ 1.97
CSF1-204ENST00000369802 TOP2BQ02880 1626 aa27.3■■□□□ 1.96
CSF1-204ENST00000369802 BIVM-ERCC5R4GMW8 1640 aa27.28■■□□□ 1.96
CSF1-204ENST00000369802 CSRNP3Q8WYN3 585 aa27.27■■□□□ 1.96
CSF1-204ENST00000369802 CFTRP13569 1480 aa27.27■■□□□ 1.96
CSF1-204ENST00000369802 PRDM2Q13029 1718 aa27.26■■□□□ 1.95
CSF1-204ENST00000369802 TRIM26Q12899 539 aaPredicted RBP27.25■■□□□ 1.95
CSF1-204ENST00000369802 TNIKQ9UKE5 1360 aa27.15■■□□□ 1.94
CSF1-204ENST00000369802 GOLGA3Q08378 1498 aa27.14■■□□□ 1.93
CSF1-204ENST00000369802 HRCP23327 699 aa27.12■■□□□ 1.93
CSF1-204ENST00000369802 KIF21BO75037 1637 aa27.12■■□□□ 1.93
CSF1-204ENST00000369802 CUX1P39880 1505 aa27.1■■□□□ 1.93
CSF1-204ENST00000369802 CEP162Q5TB80 1403 aa27.08■■□□□ 1.93
CSF1-204ENST00000369802 CEP164Q9UPV0 1460 aa27.07■■□□□ 1.92
CSF1-204ENST00000369802 CADPSQ9ULU8 1353 aa27.04■■□□□ 1.92
CSF1-204ENST00000369802 UBTFP17480 764 aaKnown RBP27■■□□□ 1.91
CSF1-204ENST00000369802 RAPGEF2Q9Y4G8 1499 aa26.88■■□□□ 1.89
CSF1-204ENST00000369802 PPARGC1BQ86YN6 1023 aaKnown RBP26.8■■□□□ 1.88
CSF1-204ENST00000369802 ERICH3Q5RHP9 1530 aa26.8■■□□□ 1.88
CSF1-204ENST00000369802 KIF27Q86VH2 1401 aa26.8■■□□□ 1.88
CSF1-204ENST00000369802 PRXQ9BXM0 1461 aa26.78■■□□□ 1.88
CSF1-204ENST00000369802 FANCD2Q9BXW9 1451 aa26.78■■□□□ 1.88
CSF1-204ENST00000369802 CLIP1P30622 1438 aa26.73■■□□□ 1.87
CSF1-204ENST00000369802 NESP48681 1621 aa26.71■■□□□ 1.87
CSF1-204ENST00000369802 FGD5Q6ZNL6 1462 aa26.7■■□□□ 1.87
CSF1-204ENST00000369802 LAMC3Q9Y6N6 1575 aa26.69■■□□□ 1.86
CSF1-204ENST00000369802 DNMBPQ6XZF7 1577 aa26.65■■□□□ 1.86
CSF1-204ENST00000369802 CUX2O14529 1486 aa26.64■■□□□ 1.85
CSF1-204ENST00000369802 VPS8Q8N3P4 1428 aa26.57■■□□□ 1.84
CSF1-204ENST00000369802 TOPBP1Q92547 1522 aa26.57■■□□□ 1.84
CSF1-204ENST00000369802 IGF1RP08069 1367 aa26.51■■□□□ 1.83
CSF1-204ENST00000369802 DNAJC5BQ9UF47 199 aa26.5■■□□□ 1.83
CSF1-204ENST00000369802 POLA1P09884 1462 aaPredicted RBP26.49■■□□□ 1.83
CSF1-204ENST00000369802 TTBK1Q5TCY1 1321 aaPredicted RBP26.48■■□□□ 1.83
CSF1-204ENST00000369802 RANGAP1P46060 587 aaPredicted RBP26.46■■□□□ 1.83
CSF1-204ENST00000369802 ABCA10Q8WWZ4 1543 aa26.45■■□□□ 1.82
CSF1-204ENST00000369802 URB2Q14146 1524 aaKnown RBP26.44■■□□□ 1.82
CSF1-204ENST00000369802 RAD54L2Q9Y4B4 1467 aa26.43■■□□□ 1.82
CSF1-204ENST00000369802 KIF21AQ7Z4S6 1674 aa26.43■■□□□ 1.82
CSF1-204ENST00000369802 PDS5BQ9NTI5 1447 aa26.43■■□□□ 1.82
CSF1-204ENST00000369802 ARAP1Q96P48 1450 aa26.42■■□□□ 1.82
CSF1-204ENST00000369802 ZEB1P37275 1124 aaPredicted RBP26.42■■□□□ 1.82
CSF1-204ENST00000369802 CARMIL1Q5VZK9 1371 aa26.39■■□□□ 1.82
CSF1-204ENST00000369802 WDR97A6NE52 1622 aa26.38■■□□□ 1.81
CSF1-204ENST00000369802 ARHGAP35Q9NRY4 1499 aa26.3■■□□□ 1.8
CSF1-204ENST00000369802 APLP2Q06481 763 aa26.3■■□□□ 1.8
CSF1-204ENST00000369802 CUL7Q14999 1698 aa26.28■■□□□ 1.8
CSF1-204ENST00000369802 ABCA5Q8WWZ7 1642 aa26.23■■□□□ 1.79
CSF1-204ENST00000369802 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.16■■□□□ 1.78
CSF1-204ENST00000369802 TARBP1Q13395 1621 aaKnown RBP26.14■■□□□ 1.78
CSF1-204ENST00000369802 CTTNBP2Q8WZ74 1663 aa26.14■■□□□ 1.78
CSF1-204ENST00000369802 GAPVD1Q14C86 1478 aa26.11■■□□□ 1.77
CSF1-204ENST00000369802 TDRD9Q8NDG6 1382 aaKnown RBP26.1■■□□□ 1.77
CSF1-204ENST00000369802 CCER1Q8TC90 406 aaPredicted RBP26.1■■□□□ 1.77
CSF1-204ENST00000369802 MRC2Q9UBG0 1479 aa26.09■■□□□ 1.77
CSF1-204ENST00000369802 KANK4Q5T7N3 995 aaPredicted RBP26.03■■□□□ 1.76
CSF1-204ENST00000369802 EFCAB5A4FU69 1503 aa26.01■■□□□ 1.75
CSF1-204ENST00000369802 PBRM1Q86U86 1689 aa26■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms