RNA–Protein interactions for RNA: ENST00000369802.7

CSF1-204, Transcript of colony stimulating factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSF1, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1-204ENST00000369802 NISCHQ9Y2I1 1504 aa37.49■■■■□ 3.59
CSF1-204ENST00000369802 CCDC180Q9P1Z9 1646 aa32.41■■■□□ 2.78
CSF1-204ENST00000369802 ZCCHC6Q5VYS8 1495 aaKnown RBP31.61■■■□□ 2.65
CSF1-204ENST00000369802 SHROOM4Q9ULL8 1493 aa31.1■■■□□ 2.57
CSF1-204ENST00000369802 DCAF1Q9Y4B6 1507 aa30.94■■■□□ 2.54
CSF1-204ENST00000369802 DCAF8L2P0C7V8 631 aa30.84■■■□□ 2.53
CSF1-204ENST00000369802 MYO15BQ96JP2 1530 aa30.32■■■□□ 2.44
CSF1-204ENST00000369802 SUPT5HO00267 1087 aaKnown RBP30.19■■■□□ 2.42
CSF1-204ENST00000369802 ABCC9O60706 1549 aa30.19■■■□□ 2.42
CSF1-204ENST00000369802 NACADO15069 1562 aa30.02■■■□□ 2.4
CSF1-204ENST00000369802 SCRIBQ14160 1630 aa29.98■■■□□ 2.39
CSF1-204ENST00000369802 RB1CC1Q8TDY2 1594 aa29.64■■■□□ 2.34
CSF1-204ENST00000369802 RSF1Q96T23 1441 aaPredicted RBP29.32■■■□□ 2.28
CSF1-204ENST00000369802 UNC13AQ9UPW8 1703 aa29.23■■■□□ 2.27
CSF1-204ENST00000369802 CHIC1Q5VXU3 224 aa29.17■■■□□ 2.26
CSF1-204ENST00000369802 CECR2Q9BXF3 1484 aa29.14■■■□□ 2.26
CSF1-204ENST00000369802 MROH2BQ7Z745 1585 aa29.03■■■□□ 2.24
CSF1-204ENST00000369802 BAZ1AQ9NRL2 1556 aaPredicted RBP28.89■■■□□ 2.21
CSF1-204ENST00000369802 WIZO95785 1651 aa28.88■■■□□ 2.21
CSF1-204ENST00000369802 BICRAQ9NZM4 1560 aa28.8■■■□□ 2.2
CSF1-204ENST00000369802 SMARCA4P51532 1647 aa28.73■■■□□ 2.19
CSF1-204ENST00000369802 PABPN1Q86U42 306 aaKnown RBP eCLIP28.59■■■□□ 2.17
CSF1-204ENST00000369802 TOP2AP11388 1531 aaKnown RBP28.5■■■□□ 2.15
CSF1-204ENST00000369802 EIF4G1Q04637 1599 aaKnown RBP28.32■■■□□ 2.12
CSF1-204ENST00000369802 PEG3Q9GZU2 1588 aa28.3■■■□□ 2.12
CSF1-204ENST00000369802 SMARCA2P51531 1590 aa28.3■■■□□ 2.12
CSF1-204ENST00000369802 TRIM41Q8WV44 630 aa28.29■■■□□ 2.12
CSF1-204ENST00000369802 CCDC88BA6NC98 1476 aa28.25■■■□□ 2.11
CSF1-204ENST00000369802 LOC105371045A0A1W2PR82 267 aa28.14■■■□□ 2.09
CSF1-204ENST00000369802 ATAD2BQ9ULI0 1458 aa28.07■■■□□ 2.08
CSF1-204ENST00000369802 BAZ1BQ9UIG0 1483 aaKnown RBP27.96■■■□□ 2.07
CSF1-204ENST00000369802 ABCC8Q09428 1581 aa27.91■■■□□ 2.06
CSF1-204ENST00000369802 FAM9AQ8IZU1 332 aaPredicted RBP27.86■■■□□ 2.05
CSF1-204ENST00000369802 HMGXB3Q12766 1538 aa27.72■■■□□ 2.03
CSF1-204ENST00000369802 NCAPD3P42695 1498 aa27.69■■■□□ 2.02
CSF1-204ENST00000369802 WRNQ14191 1432 aaPredicted RBP eCLIP27.57■■■□□ 2
CSF1-204ENST00000369802 EHMT2Q96KQ7 1210 aa27.5■■□□□ 1.99
CSF1-204ENST00000369802 SYNJ1O43426 1573 aa27.5■■□□□ 1.99
CSF1-204ENST00000369802 SOGA1O94964 1423 aa27.47■■□□□ 1.99
CSF1-204ENST00000369802 PCGF6Q9BYE7 350 aa27.46■■□□□ 1.99
CSF1-204ENST00000369802 EEA1Q15075 1411 aa27.43■■□□□ 1.98
CSF1-204ENST00000369802 RUSC2Q8N2Y8 1516 aa27.36■■□□□ 1.97
CSF1-204ENST00000369802 CC2D2AQ9P2K1 1620 aa27.33■■□□□ 1.97
CSF1-204ENST00000369802 TOP2BQ02880 1626 aa27.3■■□□□ 1.96
CSF1-204ENST00000369802 BIVM-ERCC5R4GMW8 1640 aa27.28■■□□□ 1.96
CSF1-204ENST00000369802 CSRNP3Q8WYN3 585 aa27.27■■□□□ 1.96
CSF1-204ENST00000369802 CFTRP13569 1480 aa27.27■■□□□ 1.96
CSF1-204ENST00000369802 PRDM2Q13029 1718 aa27.26■■□□□ 1.95
CSF1-204ENST00000369802 TRIM26Q12899 539 aaPredicted RBP27.25■■□□□ 1.95
CSF1-204ENST00000369802 TNIKQ9UKE5 1360 aa27.15■■□□□ 1.94
CSF1-204ENST00000369802 GOLGA3Q08378 1498 aa27.14■■□□□ 1.93
CSF1-204ENST00000369802 HRCP23327 699 aa27.12■■□□□ 1.93
CSF1-204ENST00000369802 KIF21BO75037 1637 aa27.12■■□□□ 1.93
CSF1-204ENST00000369802 CUX1P39880 1505 aa27.1■■□□□ 1.93
CSF1-204ENST00000369802 CEP162Q5TB80 1403 aa27.08■■□□□ 1.93
CSF1-204ENST00000369802 CEP164Q9UPV0 1460 aa27.07■■□□□ 1.92
CSF1-204ENST00000369802 CADPSQ9ULU8 1353 aa27.04■■□□□ 1.92
CSF1-204ENST00000369802 UBTFP17480 764 aaKnown RBP27■■□□□ 1.91
CSF1-204ENST00000369802 RAPGEF2Q9Y4G8 1499 aa26.88■■□□□ 1.89
CSF1-204ENST00000369802 PPARGC1BQ86YN6 1023 aaKnown RBP26.8■■□□□ 1.88
CSF1-204ENST00000369802 ERICH3Q5RHP9 1530 aa26.8■■□□□ 1.88
CSF1-204ENST00000369802 KIF27Q86VH2 1401 aa26.8■■□□□ 1.88
CSF1-204ENST00000369802 PRXQ9BXM0 1461 aa26.78■■□□□ 1.88
CSF1-204ENST00000369802 FANCD2Q9BXW9 1451 aa26.78■■□□□ 1.88
CSF1-204ENST00000369802 CLIP1P30622 1438 aa26.73■■□□□ 1.87
CSF1-204ENST00000369802 NESP48681 1621 aa26.71■■□□□ 1.87
CSF1-204ENST00000369802 FGD5Q6ZNL6 1462 aa26.7■■□□□ 1.87
CSF1-204ENST00000369802 LAMC3Q9Y6N6 1575 aa26.69■■□□□ 1.86
CSF1-204ENST00000369802 DNMBPQ6XZF7 1577 aa26.65■■□□□ 1.86
CSF1-204ENST00000369802 CUX2O14529 1486 aa26.64■■□□□ 1.85
CSF1-204ENST00000369802 VPS8Q8N3P4 1428 aa26.57■■□□□ 1.84
CSF1-204ENST00000369802 TOPBP1Q92547 1522 aa26.57■■□□□ 1.84
CSF1-204ENST00000369802 IGF1RP08069 1367 aa26.51■■□□□ 1.83
CSF1-204ENST00000369802 DNAJC5BQ9UF47 199 aa26.5■■□□□ 1.83
CSF1-204ENST00000369802 POLA1P09884 1462 aaPredicted RBP26.49■■□□□ 1.83
CSF1-204ENST00000369802 TTBK1Q5TCY1 1321 aaPredicted RBP26.48■■□□□ 1.83
CSF1-204ENST00000369802 RANGAP1P46060 587 aaPredicted RBP26.46■■□□□ 1.83
CSF1-204ENST00000369802 ABCA10Q8WWZ4 1543 aa26.45■■□□□ 1.82
CSF1-204ENST00000369802 URB2Q14146 1524 aaKnown RBP26.44■■□□□ 1.82
CSF1-204ENST00000369802 RAD54L2Q9Y4B4 1467 aa26.43■■□□□ 1.82
CSF1-204ENST00000369802 KIF21AQ7Z4S6 1674 aa26.43■■□□□ 1.82
CSF1-204ENST00000369802 PDS5BQ9NTI5 1447 aa26.43■■□□□ 1.82
CSF1-204ENST00000369802 ARAP1Q96P48 1450 aa26.42■■□□□ 1.82
CSF1-204ENST00000369802 ZEB1P37275 1124 aaPredicted RBP26.42■■□□□ 1.82
CSF1-204ENST00000369802 CARMIL1Q5VZK9 1371 aa26.39■■□□□ 1.82
CSF1-204ENST00000369802 WDR97A6NE52 1622 aa26.38■■□□□ 1.81
CSF1-204ENST00000369802 ARHGAP35Q9NRY4 1499 aa26.3■■□□□ 1.8
CSF1-204ENST00000369802 APLP2Q06481 763 aa26.3■■□□□ 1.8
CSF1-204ENST00000369802 CUL7Q14999 1698 aa26.28■■□□□ 1.8
CSF1-204ENST00000369802 ABCA5Q8WWZ7 1642 aa26.23■■□□□ 1.79
CSF1-204ENST00000369802 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.16■■□□□ 1.78
CSF1-204ENST00000369802 TARBP1Q13395 1621 aaKnown RBP26.14■■□□□ 1.78
CSF1-204ENST00000369802 CTTNBP2Q8WZ74 1663 aa26.14■■□□□ 1.78
CSF1-204ENST00000369802 GAPVD1Q14C86 1478 aa26.11■■□□□ 1.77
CSF1-204ENST00000369802 TDRD9Q8NDG6 1382 aaKnown RBP26.1■■□□□ 1.77
CSF1-204ENST00000369802 CCER1Q8TC90 406 aaPredicted RBP26.1■■□□□ 1.77
CSF1-204ENST00000369802 MRC2Q9UBG0 1479 aa26.09■■□□□ 1.77
CSF1-204ENST00000369802 KANK4Q5T7N3 995 aaPredicted RBP26.03■■□□□ 1.76
CSF1-204ENST00000369802 EFCAB5A4FU69 1503 aa26.01■■□□□ 1.75
CSF1-204ENST00000369802 PBRM1Q86U86 1689 aa26■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms