RNA–Protein interactions for RNA: ENST00000417255.1

ATP6V0CP3-201, Transcript of ATPase H+ transporting V0 subunit c pseudogene 3, humanhuman

BASIC

Gene ATP6V0CP3, Length 467 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0CP3-201ENST00000417255 NISCHQ9Y2I1 1504 aa41.49■■■■■ 4.23
ATP6V0CP3-201ENST00000417255 CCDC180Q9P1Z9 1646 aa37.36■■■■□ 3.57
ATP6V0CP3-201ENST00000417255 ABCC9O60706 1549 aa37.29■■■■□ 3.56
ATP6V0CP3-201ENST00000417255 RB1CC1Q8TDY2 1594 aa35.45■■■■□ 3.27
ATP6V0CP3-201ENST00000417255 NACADO15069 1562 aa35.2■■■■□ 3.23
ATP6V0CP3-201ENST00000417255 DNAJC5BQ9UF47 199 aa35.07■■■■□ 3.2
ATP6V0CP3-201ENST00000417255 UNC13AQ9UPW8 1703 aa34.99■■■■□ 3.19
ATP6V0CP3-201ENST00000417255 MYO15BQ96JP2 1530 aa34.71■■■■□ 3.15
ATP6V0CP3-201ENST00000417255 DCAF8L2P0C7V8 631 aa34.68■■■■□ 3.14
ATP6V0CP3-201ENST00000417255 BICRAQ9NZM4 1560 aa34.63■■■■□ 3.13
ATP6V0CP3-201ENST00000417255 PABPN1Q86U42 306 aaKnown RBP eCLIP34.59■■■■□ 3.13
ATP6V0CP3-201ENST00000417255 ZCCHC6Q5VYS8 1495 aaKnown RBP34.43■■■■□ 3.1
ATP6V0CP3-201ENST00000417255 DCAF1Q9Y4B6 1507 aa34.27■■■■□ 3.08
ATP6V0CP3-201ENST00000417255 SCRIBQ14160 1630 aa34.01■■■■□ 3.03
ATP6V0CP3-201ENST00000417255 SHROOM4Q9ULL8 1493 aa33.95■■■■□ 3.02
ATP6V0CP3-201ENST00000417255 CC2D2AQ9P2K1 1620 aa33.77■■■■□ 3
ATP6V0CP3-201ENST00000417255 EIF4G1Q04637 1599 aaKnown RBP33.67■■■□□ 2.98
ATP6V0CP3-201ENST00000417255 CECR2Q9BXF3 1484 aa33.56■■■□□ 2.96
ATP6V0CP3-201ENST00000417255 NCAPD3P42695 1498 aa32.48■■■□□ 2.79
ATP6V0CP3-201ENST00000417255 SMARCA4P51532 1647 aa32.45■■■□□ 2.79
ATP6V0CP3-201ENST00000417255 ATAD2BQ9ULI0 1458 aa32.42■■■□□ 2.78
ATP6V0CP3-201ENST00000417255 HMGXB3Q12766 1538 aa32.31■■■□□ 2.76
ATP6V0CP3-201ENST00000417255 SMARCA2P51531 1590 aa32.27■■■□□ 2.76
ATP6V0CP3-201ENST00000417255 BAZ1AQ9NRL2 1556 aaPredicted RBP32.17■■■□□ 2.74
ATP6V0CP3-201ENST00000417255 PEG3Q9GZU2 1588 aa32.15■■■□□ 2.74
ATP6V0CP3-201ENST00000417255 CUX2O14529 1486 aa32.12■■■□□ 2.73
ATP6V0CP3-201ENST00000417255 NESP48681 1621 aa32.1■■■□□ 2.73
ATP6V0CP3-201ENST00000417255 DNAJC5Q9H3Z4 198 aa32.08■■■□□ 2.73
ATP6V0CP3-201ENST00000417255 ERCC6Q03468 1493 aa32.06■■■□□ 2.72
ATP6V0CP3-201ENST00000417255 BAZ1BQ9UIG0 1483 aaKnown RBP32.03■■■□□ 2.72
ATP6V0CP3-201ENST00000417255 MROH2BQ7Z745 1585 aa32.02■■■□□ 2.72
ATP6V0CP3-201ENST00000417255 THOC2Q8NI27 1593 aaKnown RBP31.89■■■□□ 2.7
ATP6V0CP3-201ENST00000417255 LAMC3Q9Y6N6 1575 aa31.79■■■□□ 2.68
ATP6V0CP3-201ENST00000417255 KIF21AQ7Z4S6 1674 aa31.79■■■□□ 2.68
ATP6V0CP3-201ENST00000417255 WIZO95785 1651 aa31.69■■■□□ 2.66
ATP6V0CP3-201ENST00000417255 PDS5BQ9NTI5 1447 aa31.44■■■□□ 2.62
ATP6V0CP3-201ENST00000417255 CADPSQ9ULU8 1353 aa31.43■■■□□ 2.62
ATP6V0CP3-201ENST00000417255 RSF1Q96T23 1441 aaPredicted RBP31.34■■■□□ 2.61
ATP6V0CP3-201ENST00000417255 WDR62O43379 1518 aa31.34■■■□□ 2.61
ATP6V0CP3-201ENST00000417255 MRC2Q9UBG0 1479 aa31.31■■■□□ 2.6
ATP6V0CP3-201ENST00000417255 TOP2AP11388 1531 aaKnown RBP31.2■■■□□ 2.59
ATP6V0CP3-201ENST00000417255 CEP164Q9UPV0 1460 aa31.14■■■□□ 2.58
ATP6V0CP3-201ENST00000417255 CFTRP13569 1480 aa31.14■■■□□ 2.57
ATP6V0CP3-201ENST00000417255 FANCD2Q9BXW9 1451 aa31.13■■■□□ 2.57
ATP6V0CP3-201ENST00000417255 PRDM2Q13029 1718 aa31.06■■■□□ 2.56
ATP6V0CP3-201ENST00000417255 URB2Q14146 1524 aaKnown RBP30.98■■■□□ 2.55
ATP6V0CP3-201ENST00000417255 CCDC88BA6NC98 1476 aa30.81■■■□□ 2.52
ATP6V0CP3-201ENST00000417255 ZNF608Q9ULD9 1512 aaPredicted RBP30.6■■■□□ 2.49
ATP6V0CP3-201ENST00000417255 TOPBP1Q92547 1522 aa30.59■■■□□ 2.49
ATP6V0CP3-201ENST00000417255 TRIM41Q8WV44 630 aa30.58■■■□□ 2.49
ATP6V0CP3-201ENST00000417255 IFT140Q96RY7 1462 aa30.51■■■□□ 2.48
ATP6V0CP3-201ENST00000417255 SUPT5HO00267 1087 aaKnown RBP30.48■■■□□ 2.47
ATP6V0CP3-201ENST00000417255 EIF4G3O43432 1585 aaKnown RBP30.48■■■□□ 2.47
ATP6V0CP3-201ENST00000417255 DNMBPQ6XZF7 1577 aa30.48■■■□□ 2.47
ATP6V0CP3-201ENST00000417255 OSCARQ8IYS5 282 aa30.44■■■□□ 2.46
ATP6V0CP3-201ENST00000417255 TARBP1Q13395 1621 aaKnown RBP30.43■■■□□ 2.46
ATP6V0CP3-201ENST00000417255 RIMBP3CA6NJZ7 1639 aa30.39■■■□□ 2.46
ATP6V0CP3-201ENST00000417255 RIMBP3BA6NNM3 1639 aa30.39■■■□□ 2.46
ATP6V0CP3-201ENST00000417255 RIMBP3Q9UFD9 1639 aa30.39■■■□□ 2.46
ATP6V0CP3-201ENST00000417255 ABCC8Q09428 1581 aa30.35■■■□□ 2.45
ATP6V0CP3-201ENST00000417255 CHD1O14646 1710 aa30.33■■■□□ 2.45
ATP6V0CP3-201ENST00000417255 POLA1P09884 1462 aaPredicted RBP30.27■■■□□ 2.44
ATP6V0CP3-201ENST00000417255 ARHGEF11O15085 1522 aa30.22■■■□□ 2.43
ATP6V0CP3-201ENST00000417255 AQRO60306 1485 aaKnown RBP eCLIP30.22■■■□□ 2.43
ATP6V0CP3-201ENST00000417255 RAD54L2Q9Y4B4 1467 aa30.15■■■□□ 2.42
ATP6V0CP3-201ENST00000417255 CUX1P39880 1505 aa30.1■■■□□ 2.41
ATP6V0CP3-201ENST00000417255 WDR97A6NE52 1622 aa30.07■■■□□ 2.4
ATP6V0CP3-201ENST00000417255 FGD5Q6ZNL6 1462 aa30.06■■■□□ 2.4
ATP6V0CP3-201ENST00000417255 SOGA1O94964 1423 aa29.99■■■□□ 2.39
ATP6V0CP3-201ENST00000417255 TDRD9Q8NDG6 1382 aaKnown RBP29.97■■■□□ 2.39
ATP6V0CP3-201ENST00000417255 ARAP1Q96P48 1450 aa29.96■■■□□ 2.39
ATP6V0CP3-201ENST00000417255 SNAPC4Q5SXM2 1469 aa29.94■■■□□ 2.38
ATP6V0CP3-201ENST00000417255 CLASP1Q7Z460 1538 aa29.92■■■□□ 2.38
ATP6V0CP3-201ENST00000417255 PBRM1Q86U86 1689 aa29.89■■■□□ 2.38
ATP6V0CP3-201ENST00000417255 MAGI1Q96QZ7 1491 aaPredicted RBP29.81■■■□□ 2.36
ATP6V0CP3-201ENST00000417255 ABCA5Q8WWZ7 1642 aa29.81■■■□□ 2.36
ATP6V0CP3-201ENST00000417255 FBLN2P98095 1184 aa29.8■■■□□ 2.36
ATP6V0CP3-201ENST00000417255 GRIN2BQ13224 1484 aa29.78■■■□□ 2.36
ATP6V0CP3-201ENST00000417255 CYB5RLQ6IPT4 315 aa29.77■■■□□ 2.36
ATP6V0CP3-201ENST00000417255 SYNJ1O43426 1573 aa29.74■■■□□ 2.35
ATP6V0CP3-201ENST00000417255 ABCA10Q8WWZ4 1543 aa29.71■■■□□ 2.35
ATP6V0CP3-201ENST00000417255 SYNJ2O15056 1496 aa29.71■■■□□ 2.35
ATP6V0CP3-201ENST00000417255 GAPVD1Q14C86 1478 aa29.68■■■□□ 2.34
ATP6V0CP3-201ENST00000417255 BIVM-ERCC5R4GMW8 1640 aa29.65■■■□□ 2.34
ATP6V0CP3-201ENST00000417255 WRNQ14191 1432 aaPredicted RBP eCLIP29.62■■■□□ 2.33
ATP6V0CP3-201ENST00000417255 TOP2BQ02880 1626 aa29.57■■■□□ 2.32
ATP6V0CP3-201ENST00000417255 CHMP7Q8WUX9 453 aaPredicted RBP29.57■■■□□ 2.32
ATP6V0CP3-201ENST00000417255 ADAMTS12P58397 1594 aa29.56■■■□□ 2.32
ATP6V0CP3-201ENST00000417255 ERCC6L2Q5T890 1561 aa29.5■■■□□ 2.31
ATP6V0CP3-201ENST00000417255 CEP170Q5SW79 1584 aa29.47■■■□□ 2.31
ATP6V0CP3-201ENST00000417255 GRIN2AQ12879 1464 aa29.47■■■□□ 2.31
ATP6V0CP3-201ENST00000417255 NUP160Q12769 1436 aa29.39■■■□□ 2.3
ATP6V0CP3-201ENST00000417255 SHROOM2Q13796 1616 aa29.38■■■□□ 2.29
ATP6V0CP3-201ENST00000417255 TRHP20396 242 aaPredicted RBP29.36■■■□□ 2.29
ATP6V0CP3-201ENST00000417255 ERICH3Q5RHP9 1530 aa29.32■■■□□ 2.28
ATP6V0CP3-201ENST00000417255 FHAD1B1AJZ9 1412 aa29.28■■■□□ 2.28
ATP6V0CP3-201ENST00000417255 RUSC2Q8N2Y8 1516 aa29.16■■■□□ 2.26
ATP6V0CP3-201ENST00000417255 KIF13AQ9H1H9 1805 aa29.09■■■□□ 2.25
ATP6V0CP3-201ENST00000417255 KIF27Q86VH2 1401 aa29.07■■■□□ 2.24
ATP6V0CP3-201ENST00000417255 PRG4Q92954 1404 aaPredicted RBP29.01■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms