RNA–Protein interactions for RNA: ENST00000498628.6

CDKN2A-209, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 2 BASIC

Gene CDKN2A, Length 926 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-209ENST00000498628 NISCHQ9Y2I1 1504 aa41.78■■■■■ 4.28
CDKN2A-209ENST00000498628 CCDC180Q9P1Z9 1646 aa37.35■■■■□ 3.57
CDKN2A-209ENST00000498628 ABCC9O60706 1549 aa37.06■■■■□ 3.52
CDKN2A-209ENST00000498628 RB1CC1Q8TDY2 1594 aa35.47■■■■□ 3.27
CDKN2A-209ENST00000498628 NACADO15069 1562 aa35.3■■■■□ 3.24
CDKN2A-209ENST00000498628 DCAF8L2P0C7V8 631 aa35.29■■■■□ 3.24
CDKN2A-209ENST00000498628 MYO15BQ96JP2 1530 aa34.91■■■■□ 3.18
CDKN2A-209ENST00000498628 ZCCHC6Q5VYS8 1495 aaKnown RBP34.65■■■■□ 3.14
CDKN2A-209ENST00000498628 PABPN1Q86U42 306 aaKnown RBP eCLIP34.59■■■■□ 3.13
CDKN2A-209ENST00000498628 DCAF1Q9Y4B6 1507 aa34.55■■■■□ 3.12
CDKN2A-209ENST00000498628 UNC13AQ9UPW8 1703 aa34.48■■■■□ 3.11
CDKN2A-209ENST00000498628 DNAJC5BQ9UF47 199 aa34.45■■■■□ 3.11
CDKN2A-209ENST00000498628 BICRAQ9NZM4 1560 aa34.28■■■■□ 3.08
CDKN2A-209ENST00000498628 SHROOM4Q9ULL8 1493 aa34.02■■■■□ 3.04
CDKN2A-209ENST00000498628 SCRIBQ14160 1630 aa34.02■■■■□ 3.04
CDKN2A-209ENST00000498628 EIF4G1Q04637 1599 aaKnown RBP33.49■■■□□ 2.95
CDKN2A-209ENST00000498628 CC2D2AQ9P2K1 1620 aa33.48■■■□□ 2.95
CDKN2A-209ENST00000498628 CECR2Q9BXF3 1484 aa33.39■■■□□ 2.94
CDKN2A-209ENST00000498628 NCAPD3P42695 1498 aa32.57■■■□□ 2.8
CDKN2A-209ENST00000498628 ATAD2BQ9ULI0 1458 aa32.49■■■□□ 2.79
CDKN2A-209ENST00000498628 SMARCA4P51532 1647 aa32.49■■■□□ 2.79
CDKN2A-209ENST00000498628 SMARCA2P51531 1590 aa32.46■■■□□ 2.79
CDKN2A-209ENST00000498628 BAZ1AQ9NRL2 1556 aaPredicted RBP32.45■■■□□ 2.78
CDKN2A-209ENST00000498628 HMGXB3Q12766 1538 aa32.33■■■□□ 2.77
CDKN2A-209ENST00000498628 BAZ1BQ9UIG0 1483 aaKnown RBP32.23■■■□□ 2.75
CDKN2A-209ENST00000498628 PEG3Q9GZU2 1588 aa32.19■■■□□ 2.74
CDKN2A-209ENST00000498628 MROH2BQ7Z745 1585 aa32.15■■■□□ 2.74
CDKN2A-209ENST00000498628 ERCC6Q03468 1493 aa32.07■■■□□ 2.72
CDKN2A-209ENST00000498628 CUX2O14529 1486 aa31.89■■■□□ 2.7
CDKN2A-209ENST00000498628 NESP48681 1621 aa31.87■■■□□ 2.69
CDKN2A-209ENST00000498628 LAMC3Q9Y6N6 1575 aa31.79■■■□□ 2.68
CDKN2A-209ENST00000498628 WIZO95785 1651 aa31.76■■■□□ 2.67
CDKN2A-209ENST00000498628 PDS5BQ9NTI5 1447 aa31.68■■■□□ 2.66
CDKN2A-209ENST00000498628 CADPSQ9ULU8 1353 aa31.63■■■□□ 2.65
CDKN2A-209ENST00000498628 RSF1Q96T23 1441 aaPredicted RBP31.63■■■□□ 2.65
CDKN2A-209ENST00000498628 DNAJC5Q9H3Z4 198 aa31.55■■■□□ 2.64
CDKN2A-209ENST00000498628 THOC2Q8NI27 1593 aaKnown RBP31.47■■■□□ 2.63
CDKN2A-209ENST00000498628 KIF21AQ7Z4S6 1674 aa31.45■■■□□ 2.63
CDKN2A-209ENST00000498628 TOP2AP11388 1531 aaKnown RBP31.44■■■□□ 2.62
CDKN2A-209ENST00000498628 MRC2Q9UBG0 1479 aa31.31■■■□□ 2.6
CDKN2A-209ENST00000498628 CFTRP13569 1480 aa31.29■■■□□ 2.6
CDKN2A-209ENST00000498628 CEP164Q9UPV0 1460 aa31.26■■■□□ 2.59
CDKN2A-209ENST00000498628 FANCD2Q9BXW9 1451 aa31.23■■■□□ 2.59
CDKN2A-209ENST00000498628 WDR62O43379 1518 aa31.18■■■□□ 2.58
CDKN2A-209ENST00000498628 CCDC88BA6NC98 1476 aa31.09■■■□□ 2.57
CDKN2A-209ENST00000498628 PRDM2Q13029 1718 aa30.93■■■□□ 2.54
CDKN2A-209ENST00000498628 URB2Q14146 1524 aaKnown RBP30.89■■■□□ 2.54
CDKN2A-209ENST00000498628 ABCC8Q09428 1581 aa30.73■■■□□ 2.51
CDKN2A-209ENST00000498628 TOPBP1Q92547 1522 aa30.65■■■□□ 2.5
CDKN2A-209ENST00000498628 IFT140Q96RY7 1462 aa30.64■■■□□ 2.5
CDKN2A-209ENST00000498628 DNMBPQ6XZF7 1577 aa30.58■■■□□ 2.49
CDKN2A-209ENST00000498628 OSCARQ8IYS5 282 aa30.57■■■□□ 2.48
CDKN2A-209ENST00000498628 SUPT5HO00267 1087 aaKnown RBP30.55■■■□□ 2.48
CDKN2A-209ENST00000498628 ZNF608Q9ULD9 1512 aaPredicted RBP30.46■■■□□ 2.47
CDKN2A-209ENST00000498628 POLA1P09884 1462 aaPredicted RBP30.35■■■□□ 2.45
CDKN2A-209ENST00000498628 TRIM41Q8WV44 630 aa30.31■■■□□ 2.44
CDKN2A-209ENST00000498628 TARBP1Q13395 1621 aaKnown RBP30.3■■■□□ 2.44
CDKN2A-209ENST00000498628 EIF4G3O43432 1585 aaKnown RBP30.3■■■□□ 2.44
CDKN2A-209ENST00000498628 SOGA1O94964 1423 aa30.3■■■□□ 2.44
CDKN2A-209ENST00000498628 AQRO60306 1485 aaKnown RBP eCLIP30.27■■■□□ 2.44
CDKN2A-209ENST00000498628 RAD54L2Q9Y4B4 1467 aa30.22■■■□□ 2.43
CDKN2A-209ENST00000498628 FGD5Q6ZNL6 1462 aa30.21■■■□□ 2.43
CDKN2A-209ENST00000498628 CUX1P39880 1505 aa30.19■■■□□ 2.42
CDKN2A-209ENST00000498628 TDRD9Q8NDG6 1382 aaKnown RBP30.15■■■□□ 2.42
CDKN2A-209ENST00000498628 FBLN2P98095 1184 aa30.14■■■□□ 2.42
CDKN2A-209ENST00000498628 WDR97A6NE52 1622 aa30.12■■■□□ 2.41
CDKN2A-209ENST00000498628 CHD1O14646 1710 aa30■■■□□ 2.39
CDKN2A-209ENST00000498628 GRIN2BQ13224 1484 aa29.99■■■□□ 2.39
CDKN2A-209ENST00000498628 CHMP7Q8WUX9 453 aaPredicted RBP29.98■■■□□ 2.39
CDKN2A-209ENST00000498628 SNAPC4Q5SXM2 1469 aa29.97■■■□□ 2.39
CDKN2A-209ENST00000498628 RIMBP3CA6NJZ7 1639 aa29.96■■■□□ 2.39
CDKN2A-209ENST00000498628 RIMBP3BA6NNM3 1639 aa29.96■■■□□ 2.39
CDKN2A-209ENST00000498628 RIMBP3Q9UFD9 1639 aa29.96■■■□□ 2.39
CDKN2A-209ENST00000498628 MAGI1Q96QZ7 1491 aaPredicted RBP29.95■■■□□ 2.39
CDKN2A-209ENST00000498628 ARHGEF11O15085 1522 aa29.93■■■□□ 2.38
CDKN2A-209ENST00000498628 GAPVD1Q14C86 1478 aa29.91■■■□□ 2.38
CDKN2A-209ENST00000498628 ABCA10Q8WWZ4 1543 aa29.91■■■□□ 2.38
CDKN2A-209ENST00000498628 WRNQ14191 1432 aaPredicted RBP eCLIP29.9■■■□□ 2.38
CDKN2A-209ENST00000498628 SYNJ2O15056 1496 aa29.83■■■□□ 2.37
CDKN2A-209ENST00000498628 TOP2BQ02880 1626 aa29.82■■■□□ 2.36
CDKN2A-209ENST00000498628 SYNJ1O43426 1573 aa29.8■■■□□ 2.36
CDKN2A-209ENST00000498628 BIVM-ERCC5R4GMW8 1640 aa29.79■■■□□ 2.36
CDKN2A-209ENST00000498628 CYB5RLQ6IPT4 315 aa29.79■■■□□ 2.36
CDKN2A-209ENST00000498628 PBRM1Q86U86 1689 aa29.79■■■□□ 2.36
CDKN2A-209ENST00000498628 ABCA5Q8WWZ7 1642 aa29.77■■■□□ 2.36
CDKN2A-209ENST00000498628 CLASP1Q7Z460 1538 aa29.69■■■□□ 2.34
CDKN2A-209ENST00000498628 ARAP1Q96P48 1450 aa29.63■■■□□ 2.33
CDKN2A-209ENST00000498628 GRIN2AQ12879 1464 aa29.56■■■□□ 2.32
CDKN2A-209ENST00000498628 FHAD1B1AJZ9 1412 aa29.56■■■□□ 2.32
CDKN2A-209ENST00000498628 ERICH3Q5RHP9 1530 aa29.55■■■□□ 2.32
CDKN2A-209ENST00000498628 ADAMTS12P58397 1594 aa29.53■■■□□ 2.32
CDKN2A-209ENST00000498628 NUP160Q12769 1436 aa29.45■■■□□ 2.3
CDKN2A-209ENST00000498628 TRHP20396 242 aaPredicted RBP29.42■■■□□ 2.3
CDKN2A-209ENST00000498628 CEP170Q5SW79 1584 aa29.37■■■□□ 2.29
CDKN2A-209ENST00000498628 KIF27Q86VH2 1401 aa29.35■■■□□ 2.29
CDKN2A-209ENST00000498628 IGF1RP08069 1367 aa29.26■■■□□ 2.27
CDKN2A-209ENST00000498628 JPH4Q96JJ6 628 aa29.24■■■□□ 2.27
CDKN2A-209ENST00000498628 SHROOM2Q13796 1616 aa29.23■■■□□ 2.27
CDKN2A-209ENST00000498628 ERCC6L2Q5T890 1561 aa29.19■■■□□ 2.26
CDKN2A-209ENST00000498628 PRG4Q92954 1404 aaPredicted RBP29.18■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 133.8 ms