RNA–Protein interactions for RNA: ENST00000295033.7

TRIM17-201, Transcript of tripartite motif containing 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM17, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM17-201ENST00000295033 NISCHQ9Y2I1 1504 aa38.99■■■■□ 3.83
TRIM17-201ENST00000295033 CCDC180Q9P1Z9 1646 aa34.23■■■■□ 3.07
TRIM17-201ENST00000295033 ABCC9O60706 1549 aa34.13■■■■□ 3.05
TRIM17-201ENST00000295033 ZCCHC6Q5VYS8 1495 aaKnown RBP32.81■■■□□ 2.84
TRIM17-201ENST00000295033 RB1CC1Q8TDY2 1594 aa32.51■■■□□ 2.8
TRIM17-201ENST00000295033 DCAF8L2P0C7V8 631 aa32.45■■■□□ 2.78
TRIM17-201ENST00000295033 NACADO15069 1562 aa32.34■■■□□ 2.77
TRIM17-201ENST00000295033 DCAF1Q9Y4B6 1507 aa32.29■■■□□ 2.76
TRIM17-201ENST00000295033 MYO15BQ96JP2 1530 aa31.92■■■□□ 2.7
TRIM17-201ENST00000295033 PABPN1Q86U42 306 aaKnown RBP eCLIP31.87■■■□□ 2.69
TRIM17-201ENST00000295033 SHROOM4Q9ULL8 1493 aa31.82■■■□□ 2.69
TRIM17-201ENST00000295033 DNAJC5BQ9UF47 199 aa31.8■■■□□ 2.68
TRIM17-201ENST00000295033 UNC13AQ9UPW8 1703 aa31.76■■■□□ 2.67
TRIM17-201ENST00000295033 BICRAQ9NZM4 1560 aa31.56■■■□□ 2.64
TRIM17-201ENST00000295033 SCRIBQ14160 1630 aa31.32■■■□□ 2.6
TRIM17-201ENST00000295033 CC2D2AQ9P2K1 1620 aa30.79■■■□□ 2.52
TRIM17-201ENST00000295033 EIF4G1Q04637 1599 aaKnown RBP30.78■■■□□ 2.52
TRIM17-201ENST00000295033 SUPT5HO00267 1087 aaKnown RBP30.72■■■□□ 2.51
TRIM17-201ENST00000295033 CECR2Q9BXF3 1484 aa30.68■■■□□ 2.5
TRIM17-201ENST00000295033 RSF1Q96T23 1441 aaPredicted RBP30.33■■■□□ 2.45
TRIM17-201ENST00000295033 MROH2BQ7Z745 1585 aa30.11■■■□□ 2.41
TRIM17-201ENST00000295033 BAZ1AQ9NRL2 1556 aaPredicted RBP30.07■■■□□ 2.4
TRIM17-201ENST00000295033 SMARCA4P51532 1647 aa29.92■■■□□ 2.38
TRIM17-201ENST00000295033 NCAPD3P42695 1498 aa29.87■■■□□ 2.37
TRIM17-201ENST00000295033 WIZO95785 1651 aa29.86■■■□□ 2.37
TRIM17-201ENST00000295033 ATAD2BQ9ULI0 1458 aa29.84■■■□□ 2.37
TRIM17-201ENST00000295033 SMARCA2P51531 1590 aa29.74■■■□□ 2.35
TRIM17-201ENST00000295033 HMGXB3Q12766 1538 aa29.64■■■□□ 2.34
TRIM17-201ENST00000295033 CHIC1Q5VXU3 224 aa29.61■■■□□ 2.33
TRIM17-201ENST00000295033 PEG3Q9GZU2 1588 aa29.6■■■□□ 2.33
TRIM17-201ENST00000295033 TOP2AP11388 1531 aaKnown RBP29.59■■■□□ 2.33
TRIM17-201ENST00000295033 BAZ1BQ9UIG0 1483 aaKnown RBP29.58■■■□□ 2.33
TRIM17-201ENST00000295033 ERCC6Q03468 1493 aa29.44■■■□□ 2.3
TRIM17-201ENST00000295033 NESP48681 1621 aa29.39■■■□□ 2.29
TRIM17-201ENST00000295033 CCDC88BA6NC98 1476 aa29.27■■■□□ 2.28
TRIM17-201ENST00000295033 CUX2O14529 1486 aa29.22■■■□□ 2.27
TRIM17-201ENST00000295033 LAMC3Q9Y6N6 1575 aa29.14■■■□□ 2.26
TRIM17-201ENST00000295033 CADPSQ9ULU8 1353 aa29.01■■■□□ 2.23
TRIM17-201ENST00000295033 PDS5BQ9NTI5 1447 aa29.01■■■□□ 2.23
TRIM17-201ENST00000295033 DNAJC5Q9H3Z4 198 aa28.97■■■□□ 2.23
TRIM17-201ENST00000295033 KIF21AQ7Z4S6 1674 aa28.96■■■□□ 2.23
TRIM17-201ENST00000295033 THOC2Q8NI27 1593 aaKnown RBP28.95■■■□□ 2.23
TRIM17-201ENST00000295033 TRIM41Q8WV44 630 aa28.89■■■□□ 2.22
TRIM17-201ENST00000295033 MRC2Q9UBG0 1479 aa28.73■■■□□ 2.19
TRIM17-201ENST00000295033 CFTRP13569 1480 aa28.71■■■□□ 2.19
TRIM17-201ENST00000295033 ABCC8Q09428 1581 aa28.7■■■□□ 2.18
TRIM17-201ENST00000295033 FANCD2Q9BXW9 1451 aa28.69■■■□□ 2.18
TRIM17-201ENST00000295033 CEP164Q9UPV0 1460 aa28.69■■■□□ 2.18
TRIM17-201ENST00000295033 WDR62O43379 1518 aa28.63■■■□□ 2.17
TRIM17-201ENST00000295033 WRNQ14191 1432 aaPredicted RBP eCLIP28.51■■■□□ 2.15
TRIM17-201ENST00000295033 LOC105371045A0A1W2PR82 267 aa28.43■■■□□ 2.14
TRIM17-201ENST00000295033 URB2Q14146 1524 aaKnown RBP28.43■■■□□ 2.14
TRIM17-201ENST00000295033 SYNJ1O43426 1573 aa28.4■■■□□ 2.14
TRIM17-201ENST00000295033 PRDM2Q13029 1718 aa28.38■■■□□ 2.13
TRIM17-201ENST00000295033 FAM9AQ8IZU1 332 aaPredicted RBP28.32■■■□□ 2.12
TRIM17-201ENST00000295033 TOP2BQ02880 1626 aa28.28■■■□□ 2.12
TRIM17-201ENST00000295033 BIVM-ERCC5R4GMW8 1640 aa28.26■■■□□ 2.11
TRIM17-201ENST00000295033 EEA1Q15075 1411 aa28.25■■■□□ 2.11
TRIM17-201ENST00000295033 SOGA1O94964 1423 aa28.22■■■□□ 2.11
TRIM17-201ENST00000295033 TOPBP1Q92547 1522 aa28.16■■■□□ 2.1
TRIM17-201ENST00000295033 CUX1P39880 1505 aa28.15■■■□□ 2.1
TRIM17-201ENST00000295033 RUSC2Q8N2Y8 1516 aa28.1■■■□□ 2.09
TRIM17-201ENST00000295033 IFT140Q96RY7 1462 aa28.09■■■□□ 2.09
TRIM17-201ENST00000295033 ZNF608Q9ULD9 1512 aaPredicted RBP28.06■■■□□ 2.08
TRIM17-201ENST00000295033 DNMBPQ6XZF7 1577 aa28.06■■■□□ 2.08
TRIM17-201ENST00000295033 CSRNP3Q8WYN3 585 aa28.02■■■□□ 2.08
TRIM17-201ENST00000295033 OSCARQ8IYS5 282 aa28.01■■■□□ 2.07
TRIM17-201ENST00000295033 POLA1P09884 1462 aaPredicted RBP27.89■■■□□ 2.06
TRIM17-201ENST00000295033 EIF4G3O43432 1585 aaKnown RBP27.88■■■□□ 2.05
TRIM17-201ENST00000295033 KIF21BO75037 1637 aa27.87■■■□□ 2.05
TRIM17-201ENST00000295033 TARBP1Q13395 1621 aaKnown RBP27.86■■■□□ 2.05
TRIM17-201ENST00000295033 AQRO60306 1485 aaKnown RBP eCLIP27.86■■■□□ 2.05
TRIM17-201ENST00000295033 EHMT2Q96KQ7 1210 aa27.85■■■□□ 2.05
TRIM17-201ENST00000295033 GOLGA3Q08378 1498 aa27.84■■■□□ 2.05
TRIM17-201ENST00000295033 RAD54L2Q9Y4B4 1467 aa27.83■■■□□ 2.05
TRIM17-201ENST00000295033 TNIKQ9UKE5 1360 aa27.81■■■□□ 2.04
TRIM17-201ENST00000295033 FGD5Q6ZNL6 1462 aa27.79■■■□□ 2.04
TRIM17-201ENST00000295033 KIF27Q86VH2 1401 aa27.76■■■□□ 2.03
TRIM17-201ENST00000295033 TDRD9Q8NDG6 1382 aaKnown RBP27.74■■■□□ 2.03
TRIM17-201ENST00000295033 FBLN2P98095 1184 aa27.69■■■□□ 2.02
TRIM17-201ENST00000295033 PRXQ9BXM0 1461 aa27.68■■■□□ 2.02
TRIM17-201ENST00000295033 ERICH3Q5RHP9 1530 aa27.65■■■□□ 2.02
TRIM17-201ENST00000295033 CEP162Q5TB80 1403 aa27.65■■■□□ 2.02
TRIM17-201ENST00000295033 RAPGEF2Q9Y4G8 1499 aa27.65■■■□□ 2.02
TRIM17-201ENST00000295033 CHD1O14646 1710 aa27.62■■■□□ 2.01
TRIM17-201ENST00000295033 UBTFP17480 764 aaKnown RBP27.61■■■□□ 2.01
TRIM17-201ENST00000295033 ABCA10Q8WWZ4 1543 aa27.59■■■□□ 2.01
TRIM17-201ENST00000295033 RIMBP3CA6NJZ7 1639 aa27.57■■■□□ 2
TRIM17-201ENST00000295033 RIMBP3BA6NNM3 1639 aa27.57■■■□□ 2
TRIM17-201ENST00000295033 RIMBP3Q9UFD9 1639 aa27.57■■■□□ 2
TRIM17-201ENST00000295033 SNAPC4Q5SXM2 1469 aa27.56■■■□□ 2
TRIM17-201ENST00000295033 WDR97A6NE52 1622 aa27.54■■■□□ 2
TRIM17-201ENST00000295033 ARHGEF11O15085 1522 aa27.52■■■□□ 2
TRIM17-201ENST00000295033 IGF1RP08069 1367 aa27.52■■■□□ 2
TRIM17-201ENST00000295033 GRIN2BQ13224 1484 aa27.5■■□□□ 1.99
TRIM17-201ENST00000295033 CHMP7Q8WUX9 453 aaPredicted RBP27.48■■□□□ 1.99
TRIM17-201ENST00000295033 GAPVD1Q14C86 1478 aa27.45■■□□□ 1.98
TRIM17-201ENST00000295033 MAGI1Q96QZ7 1491 aaPredicted RBP27.45■■□□□ 1.98
TRIM17-201ENST00000295033 CLIP1P30622 1438 aa27.39■■□□□ 1.97
TRIM17-201ENST00000295033 CYB5RLQ6IPT4 315 aa27.38■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms