RNA–Protein interactions for RNA: ENST00000286627.10

KCNMA1-201, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KCNMA1, Length 6,194 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-201ENST00000286627 DCAF8L2P0C7V8 631 aa28.5■■■□□ 2.15
KCNMA1-201ENST00000286627 NISCHQ9Y2I1 1504 aa27.72■■■□□ 2.03
KCNMA1-201ENST00000286627 SUPT5HO00267 1087 aaKnown RBP27.15■■□□□ 1.94
KCNMA1-201ENST00000286627 SHROOM4Q9ULL8 1493 aa26.67■■□□□ 1.86
KCNMA1-201ENST00000286627 EHMT2Q96KQ7 1210 aa26.02■■□□□ 1.76
KCNMA1-201ENST00000286627 APLP2Q06481 763 aa25.83■■□□□ 1.72
KCNMA1-201ENST00000286627 PELP1Q8IZL8 1130 aaKnown RBP25.59■■□□□ 1.69
KCNMA1-201ENST00000286627 FAM9AQ8IZU1 332 aaPredicted RBP25.55■■□□□ 1.68
KCNMA1-201ENST00000286627 PCGF6Q9BYE7 350 aa25.3■■□□□ 1.64
KCNMA1-201ENST00000286627 TRIM41Q8WV44 630 aa25.25■■□□□ 1.63
KCNMA1-201ENST00000286627 TTBK1Q5TCY1 1321 aaPredicted RBP25.17■■□□□ 1.62
KCNMA1-201ENST00000286627 ZEB1P37275 1124 aaPredicted RBP25.07■■□□□ 1.6
KCNMA1-201ENST00000286627 RANGAP1P46060 587 aaPredicted RBP24.97■■□□□ 1.59
KCNMA1-201ENST00000286627 UBTFP17480 764 aaKnown RBP24.9■■□□□ 1.58
KCNMA1-201ENST00000286627 CCER1Q8TC90 406 aaPredicted RBP24.9■■□□□ 1.58
KCNMA1-201ENST00000286627 CENPBP07199 599 aaPredicted RBP24.83■■□□□ 1.57
KCNMA1-201ENST00000286627 ATP1B4Q9UN42 357 aaPredicted RBP24.8■■□□□ 1.56
KCNMA1-201ENST00000286627 TRIM26Q12899 539 aaPredicted RBP24.4■■□□□ 1.5
KCNMA1-201ENST00000286627 ERICH6Q7L0X2 663 aa24.37■■□□□ 1.49
KCNMA1-201ENST00000286627 PPARGC1BQ86YN6 1023 aaKnown RBP24.3■■□□□ 1.48
KCNMA1-201ENST00000286627 NEFLP07196 543 aa24.28■■□□□ 1.48
KCNMA1-201ENST00000286627 CHIC1Q5VXU3 224 aa24.24■■□□□ 1.47
KCNMA1-201ENST00000286627 YTHDC1Q96MU7 727 aaKnown RBP24.15■■□□□ 1.46
KCNMA1-201ENST00000286627 LOC105371045A0A1W2PR82 267 aa24.09■■□□□ 1.45
KCNMA1-201ENST00000286627 HRCP23327 699 aa24.05■■□□□ 1.44
KCNMA1-201ENST00000286627 ITGAEP38570 1179 aa23.99■■□□□ 1.43
KCNMA1-201ENST00000286627 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.98■■□□□ 1.43
KCNMA1-201ENST00000286627 HNRNPUL2Q1KMD3 747 aaKnown RBP23.98■■□□□ 1.43
KCNMA1-201ENST00000286627 MYT1LQ9UL68 1186 aa23.82■■□□□ 1.4
KCNMA1-201ENST00000286627 ABCC9O60706 1549 aa23.73■■□□□ 1.39
KCNMA1-201ENST00000286627 POLR3GLQ9BT43 218 aa23.71■■□□□ 1.39
KCNMA1-201ENST00000286627 MYT1Q01538 1121 aa23.7■■□□□ 1.38
KCNMA1-201ENST00000286627 PABPN1Q86U42 306 aaKnown RBP eCLIP23.61■■□□□ 1.37
KCNMA1-201ENST00000286627 DAXXQ9UER7 740 aaPredicted RBP23.47■■□□□ 1.35
KCNMA1-201ENST00000286627 FAM50AQ14320 339 aaKnown RBP23.47■■□□□ 1.35
KCNMA1-201ENST00000286627 DIEXFQ68CQ4 756 aaKnown RBP23.44■■□□□ 1.34
KCNMA1-201ENST00000286627 CNGB1Q14028 1251 aaPredicted RBP23.39■■□□□ 1.33
KCNMA1-201ENST00000286627 TRIM52Q96A61 297 aa23.33■■□□□ 1.32
KCNMA1-201ENST00000286627 SLC4A1APQ9BWU0 796 aaKnown RBP23.25■■□□□ 1.31
KCNMA1-201ENST00000286627 NEUROD1Q13562 356 aa23.2■■□□□ 1.3
KCNMA1-201ENST00000286627 CSRNP3Q8WYN3 585 aa23.16■■□□□ 1.3
KCNMA1-201ENST00000286627 FBLN2P98095 1184 aa23.05■■□□□ 1.28
KCNMA1-201ENST00000286627 ANP32CO43423 234 aa23.04■■□□□ 1.28
KCNMA1-201ENST00000286627 CLSPNQ9HAW4 1339 aa23.03■■□□□ 1.28
KCNMA1-201ENST00000286627 ZNF316A6NFI3 1004 aaPredicted RBP22.99■■□□□ 1.27
KCNMA1-201ENST00000286627 ZNF326Q5BKZ1 582 aaKnown RBP22.98■■□□□ 1.27
KCNMA1-201ENST00000286627 ZCCHC6Q5VYS8 1495 aaKnown RBP22.94■■□□□ 1.26
KCNMA1-201ENST00000286627 RTL5Q5HYW3 569 aaPredicted RBP22.92■■□□□ 1.26
KCNMA1-201ENST00000286627 P3H3Q8IVL6 736 aa22.92■■□□□ 1.26
KCNMA1-201ENST00000286627 SCRIBQ14160 1630 aa22.9■■□□□ 1.26
KCNMA1-201ENST00000286627 CDK11AQ9UQ88 783 aaPredicted RBP22.84■■□□□ 1.25
KCNMA1-201ENST00000286627 GTF3C3Q9Y5Q9 886 aa22.82■■□□□ 1.24
KCNMA1-201ENST00000286627 ARID3CA6NKF2 412 aa22.76■■□□□ 1.23
KCNMA1-201ENST00000286627 BCANQ96GW7 911 aa22.75■■□□□ 1.23
KCNMA1-201ENST00000286627 ZNF777Q9ULD5 760 aaPredicted RBP22.7■■□□□ 1.23
KCNMA1-201ENST00000286627 DCAF1Q9Y4B6 1507 aa22.67■■□□□ 1.22
KCNMA1-201ENST00000286627 ZBTB47Q9UFB7 747 aaPredicted RBP22.66■■□□□ 1.22
KCNMA1-201ENST00000286627 CCDC180Q9P1Z9 1646 aa22.64■■□□□ 1.21
KCNMA1-201ENST00000286627 NEFMP07197 916 aa22.61■■□□□ 1.21
KCNMA1-201ENST00000286627 ACIN1Q9UKV3 1341 aaKnown RBP22.59■■□□□ 1.21
KCNMA1-201ENST00000286627 TONSLQ96HA7 1378 aa22.58■■□□□ 1.21
KCNMA1-201ENST00000286627 CANXP27824 592 aaKnown RBP22.57■■□□□ 1.2
KCNMA1-201ENST00000286627 SLC24A1O60721 1099 aa22.39■■□□□ 1.17
KCNMA1-201ENST00000286627 ESF1Q9H501 851 aaKnown RBP22.39■■□□□ 1.17
KCNMA1-201ENST00000286627 NPM1P06748 294 aaKnown RBP eCLIP22.38■■□□□ 1.17
KCNMA1-201ENST00000286627 ANP32AP39687 249 aaKnown RBP22.33■■□□□ 1.17
KCNMA1-201ENST00000286627 DDX10Q13206 875 aaKnown RBP22.33■■□□□ 1.17
KCNMA1-201ENST00000286627 CLIP1P30622 1438 aa22.33■■□□□ 1.17
KCNMA1-201ENST00000286627 MTUS2Q5JR59 1369 aa22.33■■□□□ 1.16
KCNMA1-201ENST00000286627 CHGAP10645 457 aaKnown RBP22.32■■□□□ 1.16
KCNMA1-201ENST00000286627 RB1CC1Q8TDY2 1594 aa22.32■■□□□ 1.16
KCNMA1-201ENST00000286627 EEA1Q15075 1411 aa22.32■■□□□ 1.16
KCNMA1-201ENST00000286627 CHIC2Q9UKJ5 165 aa22.31■■□□□ 1.16
KCNMA1-201ENST00000286627 TSPY4P0CV99 314 aa22.3■■□□□ 1.16
KCNMA1-201ENST00000286627 TSPY10P0CW01 314 aa22.3■■□□□ 1.16
KCNMA1-201ENST00000286627 HNRNPUQ00839 825 aaKnown RBP eCLIP22.29■■□□□ 1.16
KCNMA1-201ENST00000286627 STAG3Q9UJ98 1225 aa22.28■■□□□ 1.16
KCNMA1-201ENST00000286627 RSF1Q96T23 1441 aaPredicted RBP22.26■■□□□ 1.15
KCNMA1-201ENST00000286627 BCL11AQ9H165 835 aa22.25■■□□□ 1.15
KCNMA1-201ENST00000286627 FKBP8Q14318 412 aa22.24■■□□□ 1.15
KCNMA1-201ENST00000286627 FAM9BQ8IZU0 186 aa22.22■■□□□ 1.15
KCNMA1-201ENST00000286627 CHMP7Q8WUX9 453 aaPredicted RBP22.21■■□□□ 1.15
KCNMA1-201ENST00000286627 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.19■■□□□ 1.14
KCNMA1-201ENST00000286627 GOLGA3Q08378 1498 aa22.18■■□□□ 1.14
KCNMA1-201ENST00000286627 TMC1Q8TDI8 760 aa22.17■■□□□ 1.14
KCNMA1-201ENST00000286627 NACADO15069 1562 aa22.14■■□□□ 1.13
KCNMA1-201ENST00000286627 NPM2Q86SE8 214 aaKnown RBP22.12■■□□□ 1.13
KCNMA1-201ENST00000286627 WRNQ14191 1432 aaPredicted RBP eCLIP22.11■■□□□ 1.13
KCNMA1-201ENST00000286627 CEP162Q5TB80 1403 aa22.11■■□□□ 1.13
KCNMA1-201ENST00000286627 PLPPR3Q6T4P5 718 aa22.1■■□□□ 1.13
KCNMA1-201ENST00000286627 MRS2Q9HD23 443 aa22.08■■□□□ 1.12
KCNMA1-201ENST00000286627 KDM2AQ9Y2K7 1162 aa22.07■■□□□ 1.12
KCNMA1-201ENST00000286627 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.06■■□□□ 1.12
KCNMA1-201ENST00000286627 UPF2Q9HAU5 1272 aaKnown RBP22.06■■□□□ 1.12
KCNMA1-201ENST00000286627 EIF4G2P78344 907 aaKnown RBP eCLIP22.05■■□□□ 1.12
KCNMA1-201ENST00000286627 WDR43Q15061 677 aaKnown RBP eCLIP22.04■■□□□ 1.12
KCNMA1-201ENST00000286627 BAZ1BQ9UIG0 1483 aaKnown RBP22.04■■□□□ 1.12
KCNMA1-201ENST00000286627 SALL2Q9Y467 1007 aaPredicted RBP22.04■■□□□ 1.12
KCNMA1-201ENST00000286627 KIF27Q86VH2 1401 aa22.02■■□□□ 1.11
KCNMA1-201ENST00000286627 RRP7BPQ9NSQ0 103 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms