RNA–Protein interactions for RNA: ENST00000372940.3

MRPS16-201, Transcript of mitochondrial ribosomal protein S16, humanhuman

TSL 2 BASIC

Gene MRPS16, Length 866 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS16-201ENST00000372940 NISCHQ9Y2I1 1504 aa42.3■■■■■ 4.36
MRPS16-201ENST00000372940 CCDC180Q9P1Z9 1646 aa38.01■■■■□ 3.68
MRPS16-201ENST00000372940 ABCC9O60706 1549 aa37.51■■■■□ 3.6
MRPS16-201ENST00000372940 RB1CC1Q8TDY2 1594 aa35.95■■■■□ 3.35
MRPS16-201ENST00000372940 NACADO15069 1562 aa35.76■■■■□ 3.32
MRPS16-201ENST00000372940 DCAF8L2P0C7V8 631 aa35.4■■■■□ 3.26
MRPS16-201ENST00000372940 MYO15BQ96JP2 1530 aa35.37■■■■□ 3.25
MRPS16-201ENST00000372940 UNC13AQ9UPW8 1703 aa35.3■■■■□ 3.24
MRPS16-201ENST00000372940 ZCCHC6Q5VYS8 1495 aaKnown RBP35.14■■■■□ 3.22
MRPS16-201ENST00000372940 DCAF1Q9Y4B6 1507 aa35.02■■■■□ 3.2
MRPS16-201ENST00000372940 BICRAQ9NZM4 1560 aa34.87■■■■□ 3.17
MRPS16-201ENST00000372940 PABPN1Q86U42 306 aaKnown RBP eCLIP34.86■■■■□ 3.17
MRPS16-201ENST00000372940 DNAJC5BQ9UF47 199 aa34.83■■■■□ 3.17
MRPS16-201ENST00000372940 SCRIBQ14160 1630 aa34.52■■■■□ 3.12
MRPS16-201ENST00000372940 SHROOM4Q9ULL8 1493 aa34.47■■■■□ 3.11
MRPS16-201ENST00000372940 CC2D2AQ9P2K1 1620 aa34■■■■□ 3.03
MRPS16-201ENST00000372940 EIF4G1Q04637 1599 aaKnown RBP33.98■■■■□ 3.03
MRPS16-201ENST00000372940 CECR2Q9BXF3 1484 aa33.77■■■■□ 3
MRPS16-201ENST00000372940 SMARCA4P51532 1647 aa33■■■□□ 2.87
MRPS16-201ENST00000372940 NCAPD3P42695 1498 aa32.93■■■□□ 2.86
MRPS16-201ENST00000372940 SMARCA2P51531 1590 aa32.87■■■□□ 2.85
MRPS16-201ENST00000372940 ATAD2BQ9ULI0 1458 aa32.87■■■□□ 2.85
MRPS16-201ENST00000372940 BAZ1AQ9NRL2 1556 aaPredicted RBP32.86■■■□□ 2.85
MRPS16-201ENST00000372940 HMGXB3Q12766 1538 aa32.81■■■□□ 2.84
MRPS16-201ENST00000372940 PEG3Q9GZU2 1588 aa32.69■■■□□ 2.82
MRPS16-201ENST00000372940 BAZ1BQ9UIG0 1483 aaKnown RBP32.59■■■□□ 2.81
MRPS16-201ENST00000372940 MROH2BQ7Z745 1585 aa32.58■■■□□ 2.81
MRPS16-201ENST00000372940 ERCC6Q03468 1493 aa32.39■■■□□ 2.78
MRPS16-201ENST00000372940 NESP48681 1621 aa32.31■■■□□ 2.76
MRPS16-201ENST00000372940 CUX2O14529 1486 aa32.29■■■□□ 2.76
MRPS16-201ENST00000372940 WIZO95785 1651 aa32.27■■■□□ 2.76
MRPS16-201ENST00000372940 LAMC3Q9Y6N6 1575 aa32.24■■■□□ 2.75
MRPS16-201ENST00000372940 KIF21AQ7Z4S6 1674 aa32.08■■■□□ 2.73
MRPS16-201ENST00000372940 THOC2Q8NI27 1593 aaKnown RBP32.06■■■□□ 2.72
MRPS16-201ENST00000372940 RSF1Q96T23 1441 aaPredicted RBP31.96■■■□□ 2.71
MRPS16-201ENST00000372940 PDS5BQ9NTI5 1447 aa31.95■■■□□ 2.71
MRPS16-201ENST00000372940 CADPSQ9ULU8 1353 aa31.92■■■□□ 2.7
MRPS16-201ENST00000372940 TOP2AP11388 1531 aaKnown RBP31.88■■■□□ 2.69
MRPS16-201ENST00000372940 DNAJC5Q9H3Z4 198 aa31.83■■■□□ 2.69
MRPS16-201ENST00000372940 MRC2Q9UBG0 1479 aa31.69■■■□□ 2.66
MRPS16-201ENST00000372940 PRDM2Q13029 1718 aa31.65■■■□□ 2.66
MRPS16-201ENST00000372940 CFTRP13569 1480 aa31.65■■■□□ 2.66
MRPS16-201ENST00000372940 WDR62O43379 1518 aa31.64■■■□□ 2.66
MRPS16-201ENST00000372940 CEP164Q9UPV0 1460 aa31.63■■■□□ 2.65
MRPS16-201ENST00000372940 FANCD2Q9BXW9 1451 aa31.59■■■□□ 2.65
MRPS16-201ENST00000372940 CCDC88BA6NC98 1476 aa31.43■■■□□ 2.62
MRPS16-201ENST00000372940 URB2Q14146 1524 aaKnown RBP31.32■■■□□ 2.6
MRPS16-201ENST00000372940 TOPBP1Q92547 1522 aa31.05■■■□□ 2.56
MRPS16-201ENST00000372940 ABCC8Q09428 1581 aa31.03■■■□□ 2.56
MRPS16-201ENST00000372940 DNMBPQ6XZF7 1577 aa31■■■□□ 2.55
MRPS16-201ENST00000372940 IFT140Q96RY7 1462 aa30.96■■■□□ 2.55
MRPS16-201ENST00000372940 ZNF608Q9ULD9 1512 aaPredicted RBP30.86■■■□□ 2.53
MRPS16-201ENST00000372940 EIF4G3O43432 1585 aaKnown RBP30.82■■■□□ 2.52
MRPS16-201ENST00000372940 TARBP1Q13395 1621 aaKnown RBP30.8■■■□□ 2.52
MRPS16-201ENST00000372940 OSCARQ8IYS5 282 aa30.74■■■□□ 2.51
MRPS16-201ENST00000372940 POLA1P09884 1462 aaPredicted RBP30.73■■■□□ 2.51
MRPS16-201ENST00000372940 SUPT5HO00267 1087 aaKnown RBP30.66■■■□□ 2.5
MRPS16-201ENST00000372940 CHD1O14646 1710 aa30.61■■■□□ 2.49
MRPS16-201ENST00000372940 CUX1P39880 1505 aa30.61■■■□□ 2.49
MRPS16-201ENST00000372940 AQRO60306 1485 aaKnown RBP eCLIP30.58■■■□□ 2.492e-10■■■■■ 27.8
MRPS16-201ENST00000372940 FGD5Q6ZNL6 1462 aa30.58■■■□□ 2.49
MRPS16-201ENST00000372940 WDR97A6NE52 1622 aa30.58■■■□□ 2.49
MRPS16-201ENST00000372940 RAD54L2Q9Y4B4 1467 aa30.57■■■□□ 2.48
MRPS16-201ENST00000372940 SOGA1O94964 1423 aa30.55■■■□□ 2.48
MRPS16-201ENST00000372940 TRIM41Q8WV44 630 aa30.51■■■□□ 2.47
MRPS16-201ENST00000372940 RIMBP3CA6NJZ7 1639 aa30.47■■■□□ 2.47
MRPS16-201ENST00000372940 RIMBP3BA6NNM3 1639 aa30.47■■■□□ 2.47
MRPS16-201ENST00000372940 RIMBP3Q9UFD9 1639 aa30.47■■■□□ 2.47
MRPS16-201ENST00000372940 TDRD9Q8NDG6 1382 aaKnown RBP30.41■■■□□ 2.46
MRPS16-201ENST00000372940 PBRM1Q86U86 1689 aa30.37■■■□□ 2.45
MRPS16-201ENST00000372940 ARHGEF11O15085 1522 aa30.35■■■□□ 2.45
MRPS16-201ENST00000372940 SNAPC4Q5SXM2 1469 aa30.33■■■□□ 2.45
MRPS16-201ENST00000372940 BIVM-ERCC5R4GMW8 1640 aa30.31■■■□□ 2.44
MRPS16-201ENST00000372940 MAGI1Q96QZ7 1491 aaPredicted RBP30.31■■■□□ 2.44
MRPS16-201ENST00000372940 GRIN2BQ13224 1484 aa30.3■■■□□ 2.44
MRPS16-201ENST00000372940 ABCA5Q8WWZ7 1642 aa30.27■■■□□ 2.44
MRPS16-201ENST00000372940 FBLN2P98095 1184 aa30.27■■■□□ 2.44
MRPS16-201ENST00000372940 ABCA10Q8WWZ4 1543 aa30.27■■■□□ 2.44
MRPS16-201ENST00000372940 TOP2BQ02880 1626 aa30.25■■■□□ 2.43
MRPS16-201ENST00000372940 GAPVD1Q14C86 1478 aa30.22■■■□□ 2.43
MRPS16-201ENST00000372940 SYNJ1O43426 1573 aa30.2■■■□□ 2.42
MRPS16-201ENST00000372940 SYNJ2O15056 1496 aa30.18■■■□□ 2.42
MRPS16-201ENST00000372940 WRNQ14191 1432 aaPredicted RBP eCLIP30.17■■■□□ 2.42
MRPS16-201ENST00000372940 CLASP1Q7Z460 1538 aa30.17■■■□□ 2.42
MRPS16-201ENST00000372940 CHMP7Q8WUX9 453 aaPredicted RBP30.12■■■□□ 2.41
MRPS16-201ENST00000372940 ARAP1Q96P48 1450 aa30.06■■■□□ 2.4
MRPS16-201ENST00000372940 ADAMTS12P58397 1594 aa30.01■■■□□ 2.39
MRPS16-201ENST00000372940 CYB5RLQ6IPT4 315 aa29.97■■■□□ 2.39
MRPS16-201ENST00000372940 ERICH3Q5RHP9 1530 aa29.92■■■□□ 2.38
MRPS16-201ENST00000372940 GRIN2AQ12879 1464 aa29.92■■■□□ 2.38
MRPS16-201ENST00000372940 FHAD1B1AJZ9 1412 aa29.85■■■□□ 2.37
MRPS16-201ENST00000372940 CEP170Q5SW79 1584 aa29.83■■■□□ 2.37
MRPS16-201ENST00000372940 NUP160Q12769 1436 aa29.79■■■□□ 2.36
MRPS16-201ENST00000372940 SHROOM2Q13796 1616 aa29.74■■■□□ 2.35
MRPS16-201ENST00000372940 ERCC6L2Q5T890 1561 aa29.67■■■□□ 2.34
MRPS16-201ENST00000372940 CUL7Q14999 1698 aa29.63■■■□□ 2.33
MRPS16-201ENST00000372940 RUSC2Q8N2Y8 1516 aa29.59■■■□□ 2.33
MRPS16-201ENST00000372940 KIF27Q86VH2 1401 aa29.58■■■□□ 2.33
MRPS16-201ENST00000372940 TRHP20396 242 aaPredicted RBP29.54■■■□□ 2.32
MRPS16-201ENST00000372940 IGF1RP08069 1367 aa29.48■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms