Protein–RNA interactions for Protein: Q9H4B7

TUBB1, Tubulin beta-1 chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1Q9H4B7 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.05■□□□□ 0.16
TUBB1Q9H4B7 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TUBB1Q9H4B7 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
TUBB1Q9H4B7 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
TUBB1Q9H4B7 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TUBB1Q9H4B7 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
TUBB1Q9H4B7 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
TUBB1Q9H4B7 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TUBB1Q9H4B7 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.04■□□□□ 0.16
TUBB1Q9H4B7 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TUBB1Q9H4B7 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TUBB1Q9H4B7 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TUBB1Q9H4B7 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TUBB1Q9H4B7 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TUBB1Q9H4B7 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TUBB1Q9H4B7 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TUBB1Q9H4B7 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
TUBB1Q9H4B7 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.04■□□□□ 0.16
TUBB1Q9H4B7 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
TUBB1Q9H4B7 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.04■□□□□ 0.16
TUBB1Q9H4B7 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TUBB1Q9H4B7 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TUBB1Q9H4B7 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TUBB1Q9H4B7 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.04■□□□□ 0.16
TUBB1Q9H4B7 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.04■□□□□ 0.16
TUBB1Q9H4B7 DUSP5P1-201ENST00000441325 1139 ntBASIC16.04■□□□□ 0.16
TUBB1Q9H4B7 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TUBB1Q9H4B7 SAPCD2P3-201ENST00000455031 850 ntBASIC16.04■□□□□ 0.16
TUBB1Q9H4B7 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.04■□□□□ 0.16
TUBB1Q9H4B7 POU5F1P6-201ENST00000466990 990 ntBASIC16.04■□□□□ 0.16
TUBB1Q9H4B7 AC087641.1-201ENST00000557561 1021 ntBASIC16.04■□□□□ 0.16
TUBB1Q9H4B7 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.04■□□□□ 0.16
TUBB1Q9H4B7 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.04■□□□□ 0.16
TUBB1Q9H4B7 AC006557.2-201ENST00000592985 1240 ntBASIC16.04■□□□□ 0.16
TUBB1Q9H4B7 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.04■□□□□ 0.16
TUBB1Q9H4B7 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.04■□□□□ 0.16
TUBB1Q9H4B7 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
TUBB1Q9H4B7 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TUBB1Q9H4B7 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
TUBB1Q9H4B7 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.04■□□□□ 0.16
TUBB1Q9H4B7 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TUBB1Q9H4B7 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TUBB1Q9H4B7 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TUBB1Q9H4B7 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TUBB1Q9H4B7 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TUBB1Q9H4B7 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.04■□□□□ 0.16
TUBB1Q9H4B7 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.04■□□□□ 0.16
TUBB1Q9H4B7 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TUBB1Q9H4B7 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.04■□□□□ 0.16
TUBB1Q9H4B7 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TUBB1Q9H4B7 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.04■□□□□ 0.16
TUBB1Q9H4B7 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TUBB1Q9H4B7 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.03■□□□□ 0.16
TUBB1Q9H4B7 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
TUBB1Q9H4B7 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TUBB1Q9H4B7 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.03■□□□□ 0.16
TUBB1Q9H4B7 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TUBB1Q9H4B7 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TUBB1Q9H4B7 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.03■□□□□ 0.16
TUBB1Q9H4B7 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TUBB1Q9H4B7 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
TUBB1Q9H4B7 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.03■□□□□ 0.16
TUBB1Q9H4B7 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.03■□□□□ 0.16
TUBB1Q9H4B7 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.03■□□□□ 0.16
TUBB1Q9H4B7 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.03■□□□□ 0.16
TUBB1Q9H4B7 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.03■□□□□ 0.16
TUBB1Q9H4B7 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.03■□□□□ 0.16
TUBB1Q9H4B7 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.03■□□□□ 0.16
TUBB1Q9H4B7 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.03■□□□□ 0.16
TUBB1Q9H4B7 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TUBB1Q9H4B7 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.03■□□□□ 0.16
TUBB1Q9H4B7 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.03■□□□□ 0.16
TUBB1Q9H4B7 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.03■□□□□ 0.16
TUBB1Q9H4B7 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TUBB1Q9H4B7 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
TUBB1Q9H4B7 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TUBB1Q9H4B7 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TUBB1Q9H4B7 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TUBB1Q9H4B7 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.03■□□□□ 0.16
TUBB1Q9H4B7 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.03■□□□□ 0.16
TUBB1Q9H4B7 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.03■□□□□ 0.16
TUBB1Q9H4B7 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TUBB1Q9H4B7 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TUBB1Q9H4B7 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.03■□□□□ 0.16
TUBB1Q9H4B7 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TUBB1Q9H4B7 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TUBB1Q9H4B7 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.02■□□□□ 0.16
TUBB1Q9H4B7 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TUBB1Q9H4B7 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TUBB1Q9H4B7 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TUBB1Q9H4B7 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.02■□□□□ 0.16
TUBB1Q9H4B7 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.02■□□□□ 0.16
TUBB1Q9H4B7 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TUBB1Q9H4B7 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TUBB1Q9H4B7 MIR1224-201ENST00000408193 85 ntBASIC16.02■□□□□ 0.16
TUBB1Q9H4B7 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.02■□□□□ 0.16
TUBB1Q9H4B7 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TUBB1Q9H4B7 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.02■□□□□ 0.16
TUBB1Q9H4B7 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TUBB1Q9H4B7 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms