RNA–Protein interactions for RNA: ENST00000639583.1

SPIN3-224, Transcript of spindlin family member 3, humanhuman

TSL 5 BASIC

Gene SPIN3, Length 2,245 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-224ENST00000639583 NISCHQ9Y2I1 1504 aa34.56■■■■□ 3.12
SPIN3-224ENST00000639583 CCDC180Q9P1Z9 1646 aa29.96■■■□□ 2.39
SPIN3-224ENST00000639583 ZCCHC6Q5VYS8 1495 aaKnown RBP29.04■■■□□ 2.24
SPIN3-224ENST00000639583 DCAF8L2P0C7V8 631 aa28.79■■■□□ 2.2
SPIN3-224ENST00000639583 SHROOM4Q9ULL8 1493 aa28.59■■■□□ 2.17
SPIN3-224ENST00000639583 ABCC9O60706 1549 aa28.5■■■□□ 2.15
SPIN3-224ENST00000639583 DCAF1Q9Y4B6 1507 aa28.41■■■□□ 2.14
SPIN3-224ENST00000639583 MYO15BQ96JP2 1530 aa27.98■■■□□ 2.07
SPIN3-224ENST00000639583 NACADO15069 1562 aa27.89■■■□□ 2.06
SPIN3-224ENST00000639583 SCRIBQ14160 1630 aa27.81■■■□□ 2.04
SPIN3-224ENST00000639583 HRCP23327 699 aa27.76■■■□□ 2.03
SPIN3-224ENST00000639583 PELP1Q8IZL8 1130 aaKnown RBP27.68■■■□□ 2.02
SPIN3-224ENST00000639583 RB1CC1Q8TDY2 1594 aa27.67■■■□□ 2.02
SPIN3-224ENST00000639583 SUPT5HO00267 1087 aaKnown RBP27.53■■■□□ 2
SPIN3-224ENST00000639583 UNC13AQ9UPW8 1703 aa27.26■■□□□ 1.95
SPIN3-224ENST00000639583 CECR2Q9BXF3 1484 aa26.98■■□□□ 1.91
SPIN3-224ENST00000639583 PABPN1Q86U42 306 aaKnown RBP eCLIP26.97■■□□□ 1.91
SPIN3-224ENST00000639583 BICRAQ9NZM4 1560 aa26.92■■□□□ 1.9
SPIN3-224ENST00000639583 RSF1Q96T23 1441 aaPredicted RBP26.91■■□□□ 1.9
SPIN3-224ENST00000639583 MYT1Q01538 1121 aa26.87■■□□□ 1.89
SPIN3-224ENST00000639583 MROH2BQ7Z745 1585 aa26.79■■□□□ 1.88
SPIN3-224ENST00000639583 PPARGC1BQ86YN6 1023 aaKnown RBP26.75■■□□□ 1.87
SPIN3-224ENST00000639583 PCGF6Q9BYE7 350 aa26.7■■□□□ 1.87
SPIN3-224ENST00000639583 BAZ1AQ9NRL2 1556 aaPredicted RBP26.64■■□□□ 1.86
SPIN3-224ENST00000639583 WIZO95785 1651 aa26.62■■□□□ 1.85
SPIN3-224ENST00000639583 SMARCA4P51532 1647 aa26.56■■□□□ 1.84
SPIN3-224ENST00000639583 SCAF1Q9H7N4 1312 aaKnown RBP26.32■■□□□ 1.8
SPIN3-224ENST00000639583 CHIC1Q5VXU3 224 aa26.3■■□□□ 1.8
SPIN3-224ENST00000639583 TOP2AP11388 1531 aaKnown RBP26.21■■□□□ 1.79
SPIN3-224ENST00000639583 ZEB1P37275 1124 aaPredicted RBP26.16■■□□□ 1.78
SPIN3-224ENST00000639583 PEG3Q9GZU2 1588 aa26.12■■□□□ 1.77
SPIN3-224ENST00000639583 EIF4G1Q04637 1599 aaKnown RBP26.09■■□□□ 1.77
SPIN3-224ENST00000639583 ATAD2BQ9ULI0 1458 aa26.09■■□□□ 1.77
SPIN3-224ENST00000639583 TRIM26Q12899 539 aaPredicted RBP26.04■■□□□ 1.76
SPIN3-224ENST00000639583 SMARCA2P51531 1590 aa26.02■■□□□ 1.76
SPIN3-224ENST00000639583 CCDC88BA6NC98 1476 aa26.02■■□□□ 1.76
SPIN3-224ENST00000639583 BAZ1BQ9UIG0 1483 aaKnown RBP25.97■■□□□ 1.75
SPIN3-224ENST00000639583 NCAPD3P42695 1498 aa25.77■■□□□ 1.72
SPIN3-224ENST00000639583 TRIM41Q8WV44 630 aa25.75■■□□□ 1.71
SPIN3-224ENST00000639583 HMGXB3Q12766 1538 aa25.73■■□□□ 1.71
SPIN3-224ENST00000639583 CC2D2AQ9P2K1 1620 aa25.71■■□□□ 1.71
SPIN3-224ENST00000639583 ACIN1Q9UKV3 1341 aaKnown RBP25.68■■□□□ 1.7
SPIN3-224ENST00000639583 ABCC8Q09428 1581 aa25.63■■□□□ 1.69
SPIN3-224ENST00000639583 FAM9AQ8IZU1 332 aaPredicted RBP25.47■■□□□ 1.67
SPIN3-224ENST00000639583 LOC105371045A0A1W2PR82 267 aa25.44■■□□□ 1.66
SPIN3-224ENST00000639583 NEUROD1Q13562 356 aa25.43■■□□□ 1.66
SPIN3-224ENST00000639583 TTBK1Q5TCY1 1321 aaPredicted RBP25.41■■□□□ 1.66
SPIN3-224ENST00000639583 CENPBP07199 599 aaPredicted RBP25.41■■□□□ 1.66
SPIN3-224ENST00000639583 GTF3C3Q9Y5Q9 886 aa25.35■■□□□ 1.65
SPIN3-224ENST00000639583 WRNQ14191 1432 aaPredicted RBP eCLIP25.32■■□□□ 1.64
SPIN3-224ENST00000639583 CFTRP13569 1480 aa25.27■■□□□ 1.64
SPIN3-224ENST00000639583 SYNJ1O43426 1573 aa25.26■■□□□ 1.63
SPIN3-224ENST00000639583 EHMT2Q96KQ7 1210 aa25.25■■□□□ 1.63
SPIN3-224ENST00000639583 DNAJC5BQ9UF47 199 aa25.25■■□□□ 1.63
SPIN3-224ENST00000639583 CADPSQ9ULU8 1353 aa25.18■■□□□ 1.62
SPIN3-224ENST00000639583 SOGA1O94964 1423 aa25.14■■□□□ 1.62
SPIN3-224ENST00000639583 PRDM2Q13029 1718 aa25.12■■□□□ 1.61
SPIN3-224ENST00000639583 RUSC2Q8N2Y8 1516 aa25.09■■□□□ 1.61
SPIN3-224ENST00000639583 NESP48681 1621 aa25.08■■□□□ 1.61
SPIN3-224ENST00000639583 TOP2BQ02880 1626 aa25.06■■□□□ 1.6
SPIN3-224ENST00000639583 CUX1P39880 1505 aa25.02■■□□□ 1.6
SPIN3-224ENST00000639583 BIVM-ERCC5R4GMW8 1640 aa25.01■■□□□ 1.59
SPIN3-224ENST00000639583 DIEXFQ68CQ4 756 aaKnown RBP24.97■■□□□ 1.59
SPIN3-224ENST00000639583 FANCD2Q9BXW9 1451 aa24.94■■□□□ 1.58
SPIN3-224ENST00000639583 CSRNP3Q8WYN3 585 aa24.89■■□□□ 1.57
SPIN3-224ENST00000639583 LAMC3Q9Y6N6 1575 aa24.88■■□□□ 1.57
SPIN3-224ENST00000639583 EEA1Q15075 1411 aa24.87■■□□□ 1.57
SPIN3-224ENST00000639583 CEP164Q9UPV0 1460 aa24.75■■□□□ 1.55
SPIN3-224ENST00000639583 FGD5Q6ZNL6 1462 aa24.74■■□□□ 1.55
SPIN3-224ENST00000639583 KIF21AQ7Z4S6 1674 aa24.72■■□□□ 1.55
SPIN3-224ENST00000639583 CCER1Q8TC90 406 aaPredicted RBP24.7■■□□□ 1.54
SPIN3-224ENST00000639583 PDS5BQ9NTI5 1447 aa24.7■■□□□ 1.54
SPIN3-224ENST00000639583 DNMBPQ6XZF7 1577 aa24.68■■□□□ 1.54
SPIN3-224ENST00000639583 TOPBP1Q92547 1522 aa24.68■■□□□ 1.54
SPIN3-224ENST00000639583 UBTFP17480 764 aaKnown RBP24.67■■□□□ 1.54
SPIN3-224ENST00000639583 GOLGA3Q08378 1498 aa24.65■■□□□ 1.54
SPIN3-224ENST00000639583 URB2Q14146 1524 aaKnown RBP24.64■■□□□ 1.54
SPIN3-224ENST00000639583 KIF27Q86VH2 1401 aa24.63■■□□□ 1.53
SPIN3-224ENST00000639583 KIF21BO75037 1637 aa24.62■■□□□ 1.53
SPIN3-224ENST00000639583 CUX2O14529 1486 aa24.61■■□□□ 1.53
SPIN3-224ENST00000639583 BCL11AQ9H165 835 aa24.61■■□□□ 1.53
SPIN3-224ENST00000639583 RAPGEF2Q9Y4G8 1499 aa24.6■■□□□ 1.53
SPIN3-224ENST00000639583 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.59■■□□□ 1.53
SPIN3-224ENST00000639583 POLA1P09884 1462 aaPredicted RBP24.59■■□□□ 1.53
SPIN3-224ENST00000639583 RAD54L2Q9Y4B4 1467 aa24.59■■□□□ 1.53
SPIN3-224ENST00000639583 TNIKQ9UKE5 1360 aa24.58■■□□□ 1.52
SPIN3-224ENST00000639583 CLSPNQ9HAW4 1339 aa24.57■■□□□ 1.52
SPIN3-224ENST00000639583 CEP162Q5TB80 1403 aa24.55■■□□□ 1.52
SPIN3-224ENST00000639583 PRXQ9BXM0 1461 aa24.49■■□□□ 1.51
SPIN3-224ENST00000639583 ANP32EQ9BTT0 268 aa24.48■■□□□ 1.51
SPIN3-224ENST00000639583 ZNF316A6NFI3 1004 aaPredicted RBP24.47■■□□□ 1.51
SPIN3-224ENST00000639583 RANGAP1P46060 587 aaPredicted RBP24.43■■□□□ 1.5
SPIN3-224ENST00000639583 ABCA10Q8WWZ4 1543 aa24.43■■□□□ 1.5
SPIN3-224ENST00000639583 IGF1RP08069 1367 aa24.43■■□□□ 1.5
SPIN3-224ENST00000639583 ERICH3Q5RHP9 1530 aa24.41■■□□□ 1.5
SPIN3-224ENST00000639583 MRC2Q9UBG0 1479 aa24.4■■□□□ 1.5
SPIN3-224ENST00000639583 WDR97A6NE52 1622 aa24.36■■□□□ 1.49
SPIN3-224ENST00000639583 ERCC6Q03468 1493 aa24.36■■□□□ 1.49
SPIN3-224ENST00000639583 TDRD9Q8NDG6 1382 aaKnown RBP24.35■■□□□ 1.49
SPIN3-224ENST00000639583 YTHDC1Q96MU7 727 aaKnown RBP24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms