RNA–Protein interactions for RNA: ENST00000344576.6

EGFR-203, Transcript of epidermal growth factor receptor, humanhuman

TSL 1 (best) BASIC

Gene EGFR, Length 2,864 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EGFR-203ENST00000344576 NISCHQ9Y2I1 1504 aa33.7■■■□□ 2.99
EGFR-203ENST00000344576 CCDC180Q9P1Z9 1646 aa29.01■■■□□ 2.23
EGFR-203ENST00000344576 ZCCHC6Q5VYS8 1495 aaKnown RBP28.36■■■□□ 2.13
EGFR-203ENST00000344576 SHROOM4Q9ULL8 1493 aa28.29■■■□□ 2.12
EGFR-203ENST00000344576 DCAF8L2P0C7V8 631 aa28.23■■■□□ 2.11
EGFR-203ENST00000344576 ABCC9O60706 1549 aa27.64■■■□□ 2.01
EGFR-203ENST00000344576 DCAF1Q9Y4B6 1507 aa27.58■■■□□ 2.01
EGFR-203ENST00000344576 SUPT5HO00267 1087 aaKnown RBP27.41■■□□□ 1.98
EGFR-203ENST00000344576 SCRIBQ14160 1630 aa27.17■■□□□ 1.94
EGFR-203ENST00000344576 MYO15BQ96JP2 1530 aa27.05■■□□□ 1.92
EGFR-203ENST00000344576 NACADO15069 1562 aa26.98■■□□□ 1.91
EGFR-203ENST00000344576 HRCP23327 699 aa26.97■■□□□ 1.91
EGFR-203ENST00000344576 CHIC1Q5VXU3 224 aa26.78■■□□□ 1.88
EGFR-203ENST00000344576 RB1CC1Q8TDY2 1594 aa26.74■■□□□ 1.87
EGFR-203ENST00000344576 PCGF6Q9BYE7 350 aa26.7■■□□□ 1.86
EGFR-203ENST00000344576 PPARGC1BQ86YN6 1023 aaKnown RBP26.6■■□□□ 1.85
EGFR-203ENST00000344576 CECR2Q9BXF3 1484 aa26.4■■□□□ 1.82
EGFR-203ENST00000344576 UNC13AQ9UPW8 1703 aa26.39■■□□□ 1.82
EGFR-203ENST00000344576 RSF1Q96T23 1441 aaPredicted RBP26.37■■□□□ 1.81
EGFR-203ENST00000344576 PABPN1Q86U42 306 aaKnown RBP eCLIP26.26■■□□□ 1.79
EGFR-203ENST00000344576 MROH2BQ7Z745 1585 aa26.21■■□□□ 1.79
EGFR-203ENST00000344576 LOC105371045A0A1W2PR82 267 aa26.2■■□□□ 1.78
EGFR-203ENST00000344576 BICRAQ9NZM4 1560 aa26.08■■□□□ 1.77
EGFR-203ENST00000344576 WIZO95785 1651 aa26.05■■□□□ 1.76
EGFR-203ENST00000344576 BAZ1AQ9NRL2 1556 aaPredicted RBP25.93■■□□□ 1.74
EGFR-203ENST00000344576 SMARCA4P51532 1647 aa25.86■■□□□ 1.73
EGFR-203ENST00000344576 TRIM26Q12899 539 aaPredicted RBP25.83■■□□□ 1.73
EGFR-203ENST00000344576 TOP2AP11388 1531 aaKnown RBP25.58■■□□□ 1.68
EGFR-203ENST00000344576 EHMT2Q96KQ7 1210 aa25.56■■□□□ 1.68
EGFR-203ENST00000344576 CCDC88BA6NC98 1476 aa25.45■■□□□ 1.67
EGFR-203ENST00000344576 FAM9AQ8IZU1 332 aaPredicted RBP25.45■■□□□ 1.66
EGFR-203ENST00000344576 SMARCA2P51531 1590 aa25.43■■□□□ 1.66
EGFR-203ENST00000344576 TRIM41Q8WV44 630 aa25.43■■□□□ 1.66
EGFR-203ENST00000344576 ZEB1P37275 1124 aaPredicted RBP25.38■■□□□ 1.65
EGFR-203ENST00000344576 SCAF1Q9H7N4 1312 aaKnown RBP25.37■■□□□ 1.65
EGFR-203ENST00000344576 ATAD2BQ9ULI0 1458 aa25.36■■□□□ 1.65
EGFR-203ENST00000344576 PEG3Q9GZU2 1588 aa25.34■■□□□ 1.65
EGFR-203ENST00000344576 EIF4G1Q04637 1599 aaKnown RBP25.33■■□□□ 1.65
EGFR-203ENST00000344576 BAZ1BQ9UIG0 1483 aaKnown RBP25.27■■□□□ 1.64
EGFR-203ENST00000344576 ABCC8Q09428 1581 aa25.21■■□□□ 1.63
EGFR-203ENST00000344576 PELP1Q8IZL8 1130 aaKnown RBP25.2■■□□□ 1.62
EGFR-203ENST00000344576 NCAPD3P42695 1498 aa24.96■■□□□ 1.59
EGFR-203ENST00000344576 HMGXB3Q12766 1538 aa24.92■■□□□ 1.58
EGFR-203ENST00000344576 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.91■■□□□ 1.58
EGFR-203ENST00000344576 CC2D2AQ9P2K1 1620 aa24.85■■□□□ 1.57
EGFR-203ENST00000344576 NEUROD1Q13562 356 aa24.82■■□□□ 1.56
EGFR-203ENST00000344576 WRNQ14191 1432 aaPredicted RBP eCLIP24.8■■□□□ 1.56
EGFR-203ENST00000344576 ACIN1Q9UKV3 1341 aaKnown RBP24.79■■□□□ 1.56
EGFR-203ENST00000344576 SOGA1O94964 1423 aa24.78■■□□□ 1.56
EGFR-203ENST00000344576 TTBK1Q5TCY1 1321 aaPredicted RBP24.77■■□□□ 1.56
EGFR-203ENST00000344576 CCER1Q8TC90 406 aaPredicted RBP24.77■■□□□ 1.56
EGFR-203ENST00000344576 SYNJ1O43426 1573 aa24.76■■□□□ 1.55
EGFR-203ENST00000344576 RUSC2Q8N2Y8 1516 aa24.72■■□□□ 1.55
EGFR-203ENST00000344576 GTF3C3Q9Y5Q9 886 aa24.62■■□□□ 1.53
EGFR-203ENST00000344576 DIEXFQ68CQ4 756 aaKnown RBP24.6■■□□□ 1.53
EGFR-203ENST00000344576 CFTRP13569 1480 aa24.56■■□□□ 1.52
EGFR-203ENST00000344576 DNAJC5BQ9UF47 199 aa24.53■■□□□ 1.52
EGFR-203ENST00000344576 CSRNP3Q8WYN3 585 aa24.47■■□□□ 1.51
EGFR-203ENST00000344576 TOP2BQ02880 1626 aa24.47■■□□□ 1.51
EGFR-203ENST00000344576 CUX1P39880 1505 aa24.45■■□□□ 1.51
EGFR-203ENST00000344576 CENPBP07199 599 aaPredicted RBP24.45■■□□□ 1.5
EGFR-203ENST00000344576 CADPSQ9ULU8 1353 aa24.44■■□□□ 1.5
EGFR-203ENST00000344576 NESP48681 1621 aa24.4■■□□□ 1.5
EGFR-203ENST00000344576 BIVM-ERCC5R4GMW8 1640 aa24.39■■□□□ 1.5
EGFR-203ENST00000344576 EEA1Q15075 1411 aa24.38■■□□□ 1.49
EGFR-203ENST00000344576 UBTFP17480 764 aaKnown RBP24.36■■□□□ 1.49
EGFR-203ENST00000344576 PRDM2Q13029 1718 aa24.35■■□□□ 1.49
EGFR-203ENST00000344576 CEP162Q5TB80 1403 aa24.29■■□□□ 1.48
EGFR-203ENST00000344576 YTHDC1Q96MU7 727 aaKnown RBP24.26■■□□□ 1.47
EGFR-203ENST00000344576 GOLGA3Q08378 1498 aa24.25■■□□□ 1.47
EGFR-203ENST00000344576 FANCD2Q9BXW9 1451 aa24.25■■□□□ 1.47
EGFR-203ENST00000344576 RANGAP1P46060 587 aaPredicted RBP24.21■■□□□ 1.47
EGFR-203ENST00000344576 RAPGEF2Q9Y4G8 1499 aa24.21■■□□□ 1.47
EGFR-203ENST00000344576 TNIKQ9UKE5 1360 aa24.2■■□□□ 1.47
EGFR-203ENST00000344576 ZNF316A6NFI3 1004 aaPredicted RBP24.2■■□□□ 1.46
EGFR-203ENST00000344576 CEP164Q9UPV0 1460 aa24.19■■□□□ 1.46
EGFR-203ENST00000344576 KIF21BO75037 1637 aa24.16■■□□□ 1.46
EGFR-203ENST00000344576 FGD5Q6ZNL6 1462 aa24.14■■□□□ 1.45
EGFR-203ENST00000344576 KIF27Q86VH2 1401 aa24.07■■□□□ 1.44
EGFR-203ENST00000344576 CUX2O14529 1486 aa24.07■■□□□ 1.44
EGFR-203ENST00000344576 MIER1Q8N108 512 aa24.07■■□□□ 1.44
EGFR-203ENST00000344576 LAMC3Q9Y6N6 1575 aa24.05■■□□□ 1.44
EGFR-203ENST00000344576 RAD54L2Q9Y4B4 1467 aa24.02■■□□□ 1.44
EGFR-203ENST00000344576 TOPBP1Q92547 1522 aa24■■□□□ 1.43
EGFR-203ENST00000344576 MYT1Q01538 1121 aa24■■□□□ 1.43
EGFR-203ENST00000344576 HNRNPUL2Q1KMD3 747 aaKnown RBP24■■□□□ 1.43
EGFR-203ENST00000344576 PRXQ9BXM0 1461 aa23.99■■□□□ 1.43
EGFR-203ENST00000344576 DNMBPQ6XZF7 1577 aa23.99■■□□□ 1.43
EGFR-203ENST00000344576 URB2Q14146 1524 aaKnown RBP23.97■■□□□ 1.43
EGFR-203ENST00000344576 CLIP1P30622 1438 aa23.97■■□□□ 1.43
EGFR-203ENST00000344576 KIF21AQ7Z4S6 1674 aa23.96■■□□□ 1.43
EGFR-203ENST00000344576 POLA1P09884 1462 aaPredicted RBP23.95■■□□□ 1.42
EGFR-203ENST00000344576 PDS5BQ9NTI5 1447 aa23.9■■□□□ 1.42
EGFR-203ENST00000344576 IGF1RP08069 1367 aa23.89■■□□□ 1.42
EGFR-203ENST00000344576 ERICH3Q5RHP9 1530 aa23.89■■□□□ 1.41
EGFR-203ENST00000344576 ABCA10Q8WWZ4 1543 aa23.78■■□□□ 1.4
EGFR-203ENST00000344576 CARMIL1Q5VZK9 1371 aa23.78■■□□□ 1.4
EGFR-203ENST00000344576 TDRD9Q8NDG6 1382 aaKnown RBP23.76■■□□□ 1.39
EGFR-203ENST00000344576 VPS8Q8N3P4 1428 aa23.74■■□□□ 1.39
EGFR-203ENST00000344576 ARAP1Q96P48 1450 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 361.9 ms