RNA–Protein interactions for RNA: ENST00000590099.5

BECN1-213, Transcript of beclin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BECN1, Length 2,087 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BECN1-213ENST00000590099 NISCHQ9Y2I1 1504 aa34.64■■■■□ 3.14
BECN1-213ENST00000590099 CCDC180Q9P1Z9 1646 aa29.97■■■□□ 2.39
BECN1-213ENST00000590099 ZCCHC6Q5VYS8 1495 aaKnown RBP29.19■■■□□ 2.26
BECN1-213ENST00000590099 SHROOM4Q9ULL8 1493 aa28.87■■■□□ 2.21
BECN1-213ENST00000590099 DCAF1Q9Y4B6 1507 aa28.62■■■□□ 2.17
BECN1-213ENST00000590099 DCAF8L2P0C7V8 631 aa28.47■■■□□ 2.15
BECN1-213ENST00000590099 SUPT5HO00267 1087 aaKnown RBP28.2■■■□□ 2.1
BECN1-213ENST00000590099 MYO15BQ96JP2 1530 aa28.14■■■□□ 2.09
BECN1-213ENST00000590099 ABCC9O60706 1549 aa28.09■■■□□ 2.09
BECN1-213ENST00000590099 NACADO15069 1562 aa27.85■■■□□ 2.05
BECN1-213ENST00000590099 SCRIBQ14160 1630 aa27.67■■■□□ 2.02
BECN1-213ENST00000590099 RB1CC1Q8TDY2 1594 aa27.51■■□□□ 1.99
BECN1-213ENST00000590099 CHIC1Q5VXU3 224 aa27.39■■□□□ 1.98
BECN1-213ENST00000590099 RSF1Q96T23 1441 aaPredicted RBP27.09■■□□□ 1.93
BECN1-213ENST00000590099 UNC13AQ9UPW8 1703 aa27.03■■□□□ 1.92
BECN1-213ENST00000590099 CECR2Q9BXF3 1484 aa26.94■■□□□ 1.9
BECN1-213ENST00000590099 MROH2BQ7Z745 1585 aa26.81■■□□□ 1.88
BECN1-213ENST00000590099 BICRAQ9NZM4 1560 aa26.77■■□□□ 1.88
BECN1-213ENST00000590099 BAZ1AQ9NRL2 1556 aaPredicted RBP26.69■■□□□ 1.86
BECN1-213ENST00000590099 PABPN1Q86U42 306 aaKnown RBP eCLIP26.6■■□□□ 1.85
BECN1-213ENST00000590099 WIZO95785 1651 aa26.59■■□□□ 1.85
BECN1-213ENST00000590099 SMARCA4P51532 1647 aa26.55■■□□□ 1.84
BECN1-213ENST00000590099 LOC105371045A0A1W2PR82 267 aa26.48■■□□□ 1.83
BECN1-213ENST00000590099 TRIM41Q8WV44 630 aa26.37■■□□□ 1.81
BECN1-213ENST00000590099 TOP2AP11388 1531 aaKnown RBP26.3■■□□□ 1.8
BECN1-213ENST00000590099 PEG3Q9GZU2 1588 aa26.21■■□□□ 1.79
BECN1-213ENST00000590099 PCGF6Q9BYE7 350 aa26.11■■□□□ 1.77
BECN1-213ENST00000590099 EIF4G1Q04637 1599 aaKnown RBP26.1■■□□□ 1.77
BECN1-213ENST00000590099 SMARCA2P51531 1590 aa26.09■■□□□ 1.77
BECN1-213ENST00000590099 CCDC88BA6NC98 1476 aa26.07■■□□□ 1.76
BECN1-213ENST00000590099 ATAD2BQ9ULI0 1458 aa26.04■■□□□ 1.76
BECN1-213ENST00000590099 FAM9AQ8IZU1 332 aaPredicted RBP26.02■■□□□ 1.76
BECN1-213ENST00000590099 HRCP23327 699 aa25.99■■□□□ 1.75
BECN1-213ENST00000590099 BAZ1BQ9UIG0 1483 aaKnown RBP25.88■■□□□ 1.73
BECN1-213ENST00000590099 TRIM26Q12899 539 aaPredicted RBP25.8■■□□□ 1.72
BECN1-213ENST00000590099 ABCC8Q09428 1581 aa25.77■■□□□ 1.72
BECN1-213ENST00000590099 NCAPD3P42695 1498 aa25.74■■□□□ 1.71
BECN1-213ENST00000590099 HMGXB3Q12766 1538 aa25.71■■□□□ 1.71
BECN1-213ENST00000590099 EHMT2Q96KQ7 1210 aa25.7■■□□□ 1.7
BECN1-213ENST00000590099 SOGA1O94964 1423 aa25.49■■□□□ 1.67
BECN1-213ENST00000590099 WRNQ14191 1432 aaPredicted RBP eCLIP25.44■■□□□ 1.66
BECN1-213ENST00000590099 CC2D2AQ9P2K1 1620 aa25.42■■□□□ 1.66
BECN1-213ENST00000590099 EEA1Q15075 1411 aa25.42■■□□□ 1.66
BECN1-213ENST00000590099 PPARGC1BQ86YN6 1023 aaKnown RBP25.37■■□□□ 1.65
BECN1-213ENST00000590099 RUSC2Q8N2Y8 1516 aa25.36■■□□□ 1.65
BECN1-213ENST00000590099 CSRNP3Q8WYN3 585 aa25.35■■□□□ 1.65
BECN1-213ENST00000590099 SYNJ1O43426 1573 aa25.32■■□□□ 1.64
BECN1-213ENST00000590099 TNIKQ9UKE5 1360 aa25.29■■□□□ 1.64
BECN1-213ENST00000590099 CFTRP13569 1480 aa25.28■■□□□ 1.64
BECN1-213ENST00000590099 CEP162Q5TB80 1403 aa25.24■■□□□ 1.63
BECN1-213ENST00000590099 GOLGA3Q08378 1498 aa25.17■■□□□ 1.62
BECN1-213ENST00000590099 TOP2BQ02880 1626 aa25.16■■□□□ 1.62
BECN1-213ENST00000590099 UBTFP17480 764 aaKnown RBP25.13■■□□□ 1.61
BECN1-213ENST00000590099 ZEB1P37275 1124 aaPredicted RBP25.13■■□□□ 1.61
BECN1-213ENST00000590099 BIVM-ERCC5R4GMW8 1640 aa25.12■■□□□ 1.61
BECN1-213ENST00000590099 PRDM2Q13029 1718 aa25.11■■□□□ 1.61
BECN1-213ENST00000590099 CADPSQ9ULU8 1353 aa25.1■■□□□ 1.61
BECN1-213ENST00000590099 CEP164Q9UPV0 1460 aa25.08■■□□□ 1.6
BECN1-213ENST00000590099 KIF21BO75037 1637 aa25.07■■□□□ 1.6
BECN1-213ENST00000590099 CUX1P39880 1505 aa25.04■■□□□ 1.6
BECN1-213ENST00000590099 RAPGEF2Q9Y4G8 1499 aa24.89■■□□□ 1.58
BECN1-213ENST00000590099 CLIP1P30622 1438 aa24.84■■□□□ 1.57
BECN1-213ENST00000590099 FANCD2Q9BXW9 1451 aa24.83■■□□□ 1.57
BECN1-213ENST00000590099 NESP48681 1621 aa24.81■■□□□ 1.56
BECN1-213ENST00000590099 TTBK1Q5TCY1 1321 aaPredicted RBP24.8■■□□□ 1.56
BECN1-213ENST00000590099 DNAJC5BQ9UF47 199 aa24.79■■□□□ 1.56
BECN1-213ENST00000590099 PRXQ9BXM0 1461 aa24.77■■□□□ 1.56
BECN1-213ENST00000590099 LAMC3Q9Y6N6 1575 aa24.77■■□□□ 1.56
BECN1-213ENST00000590099 ERICH3Q5RHP9 1530 aa24.74■■□□□ 1.55
BECN1-213ENST00000590099 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.74■■□□□ 1.55
BECN1-213ENST00000590099 VPS8Q8N3P4 1428 aa24.72■■□□□ 1.55
BECN1-213ENST00000590099 KIF27Q86VH2 1401 aa24.71■■□□□ 1.55
BECN1-213ENST00000590099 FGD5Q6ZNL6 1462 aa24.69■■□□□ 1.54
BECN1-213ENST00000590099 CCER1Q8TC90 406 aaPredicted RBP24.66■■□□□ 1.54
BECN1-213ENST00000590099 DNMBPQ6XZF7 1577 aa24.65■■□□□ 1.54
BECN1-213ENST00000590099 TOPBP1Q92547 1522 aa24.61■■□□□ 1.53
BECN1-213ENST00000590099 CUX2O14529 1486 aa24.59■■□□□ 1.53
BECN1-213ENST00000590099 RANGAP1P46060 587 aaPredicted RBP24.58■■□□□ 1.53
BECN1-213ENST00000590099 PDS5BQ9NTI5 1447 aa24.56■■□□□ 1.52
BECN1-213ENST00000590099 URB2Q14146 1524 aaKnown RBP24.53■■□□□ 1.52
BECN1-213ENST00000590099 POLA1P09884 1462 aaPredicted RBP24.52■■□□□ 1.52
BECN1-213ENST00000590099 APLP2Q06481 763 aa24.52■■□□□ 1.52
BECN1-213ENST00000590099 IGF1RP08069 1367 aa24.51■■□□□ 1.51
BECN1-213ENST00000590099 ARAP1Q96P48 1450 aa24.5■■□□□ 1.51
BECN1-213ENST00000590099 ABCA10Q8WWZ4 1543 aa24.47■■□□□ 1.51
BECN1-213ENST00000590099 RAD54L2Q9Y4B4 1467 aa24.47■■□□□ 1.51
BECN1-213ENST00000590099 KIF21AQ7Z4S6 1674 aa24.47■■□□□ 1.51
BECN1-213ENST00000590099 CARMIL1Q5VZK9 1371 aa24.37■■□□□ 1.49
BECN1-213ENST00000590099 WDR97A6NE52 1622 aa24.36■■□□□ 1.49
BECN1-213ENST00000590099 HNRNPUL2Q1KMD3 747 aaKnown RBP24.35■■□□□ 1.49
BECN1-213ENST00000590099 ARHGAP35Q9NRY4 1499 aa24.35■■□□□ 1.49
BECN1-213ENST00000590099 KANK4Q5T7N3 995 aaPredicted RBP24.28■■□□□ 1.48
BECN1-213ENST00000590099 MRC2Q9UBG0 1479 aa24.25■■□□□ 1.47
BECN1-213ENST00000590099 ABCA5Q8WWZ7 1642 aa24.25■■□□□ 1.47
BECN1-213ENST00000590099 TARBP1Q13395 1621 aaKnown RBP24.22■■□□□ 1.47
BECN1-213ENST00000590099 CUL7Q14999 1698 aa24.21■■□□□ 1.47
BECN1-213ENST00000590099 TDRD9Q8NDG6 1382 aaKnown RBP24.19■■□□□ 1.46
BECN1-213ENST00000590099 GAPVD1Q14C86 1478 aa24.17■■□□□ 1.46
BECN1-213ENST00000590099 RRBP1Q9P2E9 1410 aaKnown RBP24.13■■□□□ 1.45
BECN1-213ENST00000590099 WDR62O43379 1518 aa24.12■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms