RNA–Protein interactions for RNA: ENST00000535004.1

MMP17-203, Transcript of matrix metallopeptidase 17, humanhuman

TSL 3 BASIC

Gene MMP17, Length 719 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP17-203ENST00000535004 NISCHQ9Y2I1 1504 aa40.37■■■■■ 4.05
MMP17-203ENST00000535004 CCDC180Q9P1Z9 1646 aa35.67■■■■□ 3.3
MMP17-203ENST00000535004 ABCC9O60706 1549 aa34.47■■■■□ 3.11
MMP17-203ENST00000535004 ZCCHC6Q5VYS8 1495 aaKnown RBP33.71■■■□□ 2.99
MMP17-203ENST00000535004 DCAF8L2P0C7V8 631 aa33.48■■■□□ 2.95
MMP17-203ENST00000535004 NACADO15069 1562 aa33.44■■■□□ 2.94
MMP17-203ENST00000535004 DCAF1Q9Y4B6 1507 aa33.43■■■□□ 2.94
MMP17-203ENST00000535004 MYO15BQ96JP2 1530 aa33.4■■■□□ 2.94
MMP17-203ENST00000535004 RB1CC1Q8TDY2 1594 aa33.34■■■□□ 2.93
MMP17-203ENST00000535004 UNC13AQ9UPW8 1703 aa32.68■■■□□ 2.82
MMP17-203ENST00000535004 SCRIBQ14160 1630 aa32.56■■■□□ 2.8
MMP17-203ENST00000535004 BICRAQ9NZM4 1560 aa32.4■■■□□ 2.78
MMP17-203ENST00000535004 PABPN1Q86U42 306 aaKnown RBP eCLIP32.31■■■□□ 2.76
MMP17-203ENST00000535004 SHROOM4Q9ULL8 1493 aa32.1■■■□□ 2.73
MMP17-203ENST00000535004 EIF4G1Q04637 1599 aaKnown RBP31.45■■■□□ 2.63
MMP17-203ENST00000535004 CECR2Q9BXF3 1484 aa31.41■■■□□ 2.62
MMP17-203ENST00000535004 DNAJC5BQ9UF47 199 aa31.34■■■□□ 2.61
MMP17-203ENST00000535004 CC2D2AQ9P2K1 1620 aa31.23■■■□□ 2.59
MMP17-203ENST00000535004 BAZ1AQ9NRL2 1556 aaPredicted RBP31.22■■■□□ 2.59
MMP17-203ENST00000535004 SMARCA4P51532 1647 aa31.21■■■□□ 2.59
MMP17-203ENST00000535004 MROH2BQ7Z745 1585 aa31.13■■■□□ 2.57
MMP17-203ENST00000535004 ATAD2BQ9ULI0 1458 aa30.95■■■□□ 2.55
MMP17-203ENST00000535004 RSF1Q96T23 1441 aaPredicted RBP30.93■■■□□ 2.54
MMP17-203ENST00000535004 PEG3Q9GZU2 1588 aa30.92■■■□□ 2.54
MMP17-203ENST00000535004 SMARCA2P51531 1590 aa30.9■■■□□ 2.54
MMP17-203ENST00000535004 NCAPD3P42695 1498 aa30.88■■■□□ 2.53
MMP17-203ENST00000535004 WIZO95785 1651 aa30.81■■■□□ 2.52
MMP17-203ENST00000535004 HMGXB3Q12766 1538 aa30.73■■■□□ 2.51
MMP17-203ENST00000535004 BAZ1BQ9UIG0 1483 aaKnown RBP30.67■■■□□ 2.5
MMP17-203ENST00000535004 TOP2AP11388 1531 aaKnown RBP30.47■■■□□ 2.47
MMP17-203ENST00000535004 SUPT5HO00267 1087 aaKnown RBP30.42■■■□□ 2.46
MMP17-203ENST00000535004 CCDC88BA6NC98 1476 aa30.15■■■□□ 2.42
MMP17-203ENST00000535004 NESP48681 1621 aa29.99■■■□□ 2.39
MMP17-203ENST00000535004 CADPSQ9ULU8 1353 aa29.99■■■□□ 2.39
MMP17-203ENST00000535004 LAMC3Q9Y6N6 1575 aa29.96■■■□□ 2.39
MMP17-203ENST00000535004 CFTRP13569 1480 aa29.91■■■□□ 2.38
MMP17-203ENST00000535004 PDS5BQ9NTI5 1447 aa29.72■■■□□ 2.35
MMP17-203ENST00000535004 PRDM2Q13029 1718 aa29.71■■■□□ 2.35
MMP17-203ENST00000535004 KIF21AQ7Z4S6 1674 aa29.65■■■□□ 2.34
MMP17-203ENST00000535004 ERCC6Q03468 1493 aa29.63■■■□□ 2.33
MMP17-203ENST00000535004 FANCD2Q9BXW9 1451 aa29.61■■■□□ 2.33
MMP17-203ENST00000535004 CEP164Q9UPV0 1460 aa29.52■■■□□ 2.32
MMP17-203ENST00000535004 THOC2Q8NI27 1593 aaKnown RBP29.43■■■□□ 2.3
MMP17-203ENST00000535004 MRC2Q9UBG0 1479 aa29.4■■■□□ 2.3
MMP17-203ENST00000535004 URB2Q14146 1524 aaKnown RBP29.33■■■□□ 2.29
MMP17-203ENST00000535004 WDR62O43379 1518 aa29.3■■■□□ 2.28
MMP17-203ENST00000535004 ABCC8Q09428 1581 aa29.22■■■□□ 2.27
MMP17-203ENST00000535004 TOPBP1Q92547 1522 aa29.21■■■□□ 2.27
MMP17-203ENST00000535004 CUX2O14529 1486 aa29.21■■■□□ 2.27
MMP17-203ENST00000535004 DNMBPQ6XZF7 1577 aa29.2■■■□□ 2.26
MMP17-203ENST00000535004 CUX1P39880 1505 aa29.17■■■□□ 2.26
MMP17-203ENST00000535004 WRNQ14191 1432 aaPredicted RBP eCLIP29.11■■■□□ 2.25
MMP17-203ENST00000535004 SYNJ1O43426 1573 aa29.03■■■□□ 2.24
MMP17-203ENST00000535004 BIVM-ERCC5R4GMW8 1640 aa29.02■■■□□ 2.24
MMP17-203ENST00000535004 TOP2BQ02880 1626 aa29.02■■■□□ 2.24
MMP17-203ENST00000535004 POLA1P09884 1462 aaPredicted RBP28.99■■■□□ 2.23
MMP17-203ENST00000535004 FGD5Q6ZNL6 1462 aa28.97■■■□□ 2.23
MMP17-203ENST00000535004 IFT140Q96RY7 1462 aa28.9■■■□□ 2.22
MMP17-203ENST00000535004 TARBP1Q13395 1621 aaKnown RBP28.88■■■□□ 2.21
MMP17-203ENST00000535004 SOGA1O94964 1423 aa28.87■■■□□ 2.21
MMP17-203ENST00000535004 RAD54L2Q9Y4B4 1467 aa28.87■■■□□ 2.21
MMP17-203ENST00000535004 ZNF608Q9ULD9 1512 aaPredicted RBP28.76■■■□□ 2.19
MMP17-203ENST00000535004 WDR97A6NE52 1622 aa28.74■■■□□ 2.19
MMP17-203ENST00000535004 ABCA10Q8WWZ4 1543 aa28.74■■■□□ 2.19
MMP17-203ENST00000535004 CHIC1Q5VXU3 224 aa28.71■■■□□ 2.19
MMP17-203ENST00000535004 TRIM41Q8WV44 630 aa28.7■■■□□ 2.18
MMP17-203ENST00000535004 TDRD9Q8NDG6 1382 aaKnown RBP28.66■■■□□ 2.18
MMP17-203ENST00000535004 AQRO60306 1485 aaKnown RBP eCLIP28.65■■■□□ 2.186e-12■■■□□ 18.3
MMP17-203ENST00000535004 EIF4G3O43432 1585 aaKnown RBP28.62■■■□□ 2.17
MMP17-203ENST00000535004 ABCA5Q8WWZ7 1642 aa28.58■■■□□ 2.17
MMP17-203ENST00000535004 GAPVD1Q14C86 1478 aa28.55■■■□□ 2.16
MMP17-203ENST00000535004 GRIN2BQ13224 1484 aa28.47■■■□□ 2.15
MMP17-203ENST00000535004 PBRM1Q86U86 1689 aa28.46■■■□□ 2.15
MMP17-203ENST00000535004 KIF27Q86VH2 1401 aa28.45■■■□□ 2.15
MMP17-203ENST00000535004 RUSC2Q8N2Y8 1516 aa28.4■■■□□ 2.14
MMP17-203ENST00000535004 ERICH3Q5RHP9 1530 aa28.38■■■□□ 2.13
MMP17-203ENST00000535004 SNAPC4Q5SXM2 1469 aa28.37■■■□□ 2.13
MMP17-203ENST00000535004 IGF1RP08069 1367 aa28.36■■■□□ 2.13
MMP17-203ENST00000535004 MAGI1Q96QZ7 1491 aaPredicted RBP28.35■■■□□ 2.13
MMP17-203ENST00000535004 ADAMTS12P58397 1594 aa28.24■■■□□ 2.11
MMP17-203ENST00000535004 SYNJ2O15056 1496 aa28.23■■■□□ 2.11
MMP17-203ENST00000535004 FHAD1B1AJZ9 1412 aa28.23■■■□□ 2.11
MMP17-203ENST00000535004 CHD1O14646 1710 aa28.21■■■□□ 2.11
MMP17-203ENST00000535004 EEA1Q15075 1411 aa28.2■■■□□ 2.11
MMP17-203ENST00000535004 CUL7Q14999 1698 aa28.19■■■□□ 2.1
MMP17-203ENST00000535004 CHMP7Q8WUX9 453 aaPredicted RBP28.18■■■□□ 2.1
MMP17-203ENST00000535004 CARMIL1Q5VZK9 1371 aa28.17■■■□□ 2.1
MMP17-203ENST00000535004 FBLN2P98095 1184 aa28.16■■■□□ 2.1
MMP17-203ENST00000535004 CSRNP3Q8WYN3 585 aa28.14■■■□□ 2.1
MMP17-203ENST00000535004 GRIN2AQ12879 1464 aa28.11■■■□□ 2.09
MMP17-203ENST00000535004 OSCARQ8IYS5 282 aa28.09■■■□□ 2.09
MMP17-203ENST00000535004 FAM9AQ8IZU1 332 aaPredicted RBP28.09■■■□□ 2.09
MMP17-203ENST00000535004 PRXQ9BXM0 1461 aa28.07■■■□□ 2.08
MMP17-203ENST00000535004 RAPGEF2Q9Y4G8 1499 aa28.02■■■□□ 2.08
MMP17-203ENST00000535004 NUP160Q12769 1436 aa28■■■□□ 2.07
MMP17-203ENST00000535004 CEP170Q5SW79 1584 aa27.97■■■□□ 2.07
MMP17-203ENST00000535004 CLASP1Q7Z460 1538 aa27.92■■■□□ 2.06
MMP17-203ENST00000535004 KIF21BO75037 1637 aa27.89■■■□□ 2.06
MMP17-203ENST00000535004 DNAJC5Q9H3Z4 198 aa27.85■■■□□ 2.05
MMP17-203ENST00000535004 KIAA0586Q9BVV6 1533 aa27.82■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 139.2 ms