RNA–Protein interactions for RNA: ENST00000564340.1

ERVK13-1-203, Transcript of endogenous retrovirus group K13 member 1, humanhuman

TSL 1 (best) BASIC

Gene ERVK13-1, Length 1,449 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERVK13-1-203ENST00000564340 NISCHQ9Y2I1 1504 aa45.15■■■■■ 4.82
ERVK13-1-203ENST00000564340 ABCC9O60706 1549 aa40.59■■■■■ 4.09
ERVK13-1-203ENST00000564340 CCDC180Q9P1Z9 1646 aa40.43■■■■■ 4.06
ERVK13-1-203ENST00000564340 RB1CC1Q8TDY2 1594 aa38.53■■■■□ 3.76
ERVK13-1-203ENST00000564340 NACADO15069 1562 aa38.27■■■■□ 3.72
ERVK13-1-203ENST00000564340 DNAJC5BQ9UF47 199 aa38.2■■■■□ 3.71
ERVK13-1-203ENST00000564340 DCAF8L2P0C7V8 631 aa38.16■■■■□ 3.7
ERVK13-1-203ENST00000564340 PABPN1Q86U42 306 aaKnown RBP eCLIP37.83■■■■□ 3.65
ERVK13-1-203ENST00000564340 MYO15BQ96JP2 1530 aa37.73■■■■□ 3.63
ERVK13-1-203ENST00000564340 UNC13AQ9UPW8 1703 aa37.67■■■■□ 3.62
ERVK13-1-203ENST00000564340 BICRAQ9NZM4 1560 aa37.49■■■■□ 3.59
ERVK13-1-203ENST00000564340 ZCCHC6Q5VYS8 1495 aaKnown RBP37.4■■■■□ 3.58
ERVK13-1-203ENST00000564340 DCAF1Q9Y4B6 1507 aa37.25■■■■□ 3.55
ERVK13-1-203ENST00000564340 SCRIBQ14160 1630 aa36.92■■■■□ 3.5
ERVK13-1-203ENST00000564340 SHROOM4Q9ULL8 1493 aa36.88■■■■□ 3.49
ERVK13-1-203ENST00000564340 CC2D2AQ9P2K1 1620 aa36.62■■■■□ 3.45
ERVK13-1-203ENST00000564340 CECR2Q9BXF3 1484 aa36.54■■■■□ 3.44
ERVK13-1-203ENST00000564340 EIF4G1Q04637 1599 aaKnown RBP36.53■■■■□ 3.44
ERVK13-1-203ENST00000564340 NCAPD3P42695 1498 aa35.38■■■■□ 3.25
ERVK13-1-203ENST00000564340 ATAD2BQ9ULI0 1458 aa35.28■■■■□ 3.24
ERVK13-1-203ENST00000564340 SMARCA4P51532 1647 aa35.2■■■■□ 3.23
ERVK13-1-203ENST00000564340 SMARCA2P51531 1590 aa35.11■■■■□ 3.21
ERVK13-1-203ENST00000564340 HMGXB3Q12766 1538 aa35.07■■■■□ 3.2
ERVK13-1-203ENST00000564340 DNAJC5Q9H3Z4 198 aa35.02■■■■□ 3.2
ERVK13-1-203ENST00000564340 BAZ1AQ9NRL2 1556 aaPredicted RBP35.01■■■■□ 3.19
ERVK13-1-203ENST00000564340 ERCC6Q03468 1493 aa34.99■■■■□ 3.19
ERVK13-1-203ENST00000564340 CUX2O14529 1486 aa34.93■■■■□ 3.18
ERVK13-1-203ENST00000564340 BAZ1BQ9UIG0 1483 aaKnown RBP34.9■■■■□ 3.18
ERVK13-1-203ENST00000564340 NESP48681 1621 aa34.88■■■■□ 3.17
ERVK13-1-203ENST00000564340 PEG3Q9GZU2 1588 aa34.85■■■■□ 3.17
ERVK13-1-203ENST00000564340 MROH2BQ7Z745 1585 aa34.82■■■■□ 3.16
ERVK13-1-203ENST00000564340 LAMC3Q9Y6N6 1575 aa34.53■■■■□ 3.12
ERVK13-1-203ENST00000564340 THOC2Q8NI27 1593 aaKnown RBP34.47■■■■□ 3.11
ERVK13-1-203ENST00000564340 WIZO95785 1651 aa34.37■■■■□ 3.09
ERVK13-1-203ENST00000564340 PDS5BQ9NTI5 1447 aa34.36■■■■□ 3.09
ERVK13-1-203ENST00000564340 KIF21AQ7Z4S6 1674 aa34.35■■■■□ 3.09
ERVK13-1-203ENST00000564340 CADPSQ9ULU8 1353 aa34.31■■■■□ 3.08
ERVK13-1-203ENST00000564340 RSF1Q96T23 1441 aaPredicted RBP34.09■■■■□ 3.05
ERVK13-1-203ENST00000564340 MRC2Q9UBG0 1479 aa34.08■■■■□ 3.05
ERVK13-1-203ENST00000564340 WDR62O43379 1518 aa33.99■■■■□ 3.03
ERVK13-1-203ENST00000564340 CEP164Q9UPV0 1460 aa33.92■■■■□ 3.02
ERVK13-1-203ENST00000564340 FANCD2Q9BXW9 1451 aa33.91■■■■□ 3.02
ERVK13-1-203ENST00000564340 TOP2AP11388 1531 aaKnown RBP33.91■■■■□ 3.02
ERVK13-1-203ENST00000564340 CFTRP13569 1480 aa33.91■■■■□ 3.02
ERVK13-1-203ENST00000564340 URB2Q14146 1524 aaKnown RBP33.66■■■□□ 2.98
ERVK13-1-203ENST00000564340 CCDC88BA6NC98 1476 aa33.58■■■□□ 2.97
ERVK13-1-203ENST00000564340 TRIM41Q8WV44 630 aa33.47■■■□□ 2.95
ERVK13-1-203ENST00000564340 PRDM2Q13029 1718 aa33.45■■■□□ 2.95
ERVK13-1-203ENST00000564340 OSCARQ8IYS5 282 aa33.37■■■□□ 2.93
ERVK13-1-203ENST00000564340 TOPBP1Q92547 1522 aa33.27■■■□□ 2.92
ERVK13-1-203ENST00000564340 ZNF608Q9ULD9 1512 aaPredicted RBP33.27■■■□□ 2.92
ERVK13-1-203ENST00000564340 IFT140Q96RY7 1462 aa33.25■■■□□ 2.91
ERVK13-1-203ENST00000564340 ABCC8Q09428 1581 aa33.13■■■□□ 2.89
ERVK13-1-203ENST00000564340 DNMBPQ6XZF7 1577 aa33.12■■■□□ 2.89
ERVK13-1-203ENST00000564340 EIF4G3O43432 1585 aaKnown RBP33.01■■■□□ 2.88
ERVK13-1-203ENST00000564340 TARBP1Q13395 1621 aaKnown RBP32.97■■■□□ 2.87
ERVK13-1-203ENST00000564340 AQRO60306 1485 aaKnown RBP eCLIP32.96■■■□□ 2.871e-6■■■■■ 33.8
ERVK13-1-203ENST00000564340 POLA1P09884 1462 aaPredicted RBP32.94■■■□□ 2.86
ERVK13-1-203ENST00000564340 RIMBP3CA6NJZ7 1639 aa32.92■■■□□ 2.86
ERVK13-1-203ENST00000564340 RIMBP3BA6NNM3 1639 aa32.92■■■□□ 2.86
ERVK13-1-203ENST00000564340 RIMBP3Q9UFD9 1639 aa32.92■■■□□ 2.86
ERVK13-1-203ENST00000564340 RAD54L2Q9Y4B4 1467 aa32.85■■■□□ 2.85
ERVK13-1-203ENST00000564340 ARHGEF11O15085 1522 aa32.83■■■□□ 2.85
ERVK13-1-203ENST00000564340 SOGA1O94964 1423 aa32.79■■■□□ 2.84
ERVK13-1-203ENST00000564340 TDRD9Q8NDG6 1382 aaKnown RBP32.76■■■□□ 2.84
ERVK13-1-203ENST00000564340 CHD1O14646 1710 aa32.76■■■□□ 2.84
ERVK13-1-203ENST00000564340 FBLN2P98095 1184 aa32.74■■■□□ 2.83
ERVK13-1-203ENST00000564340 FGD5Q6ZNL6 1462 aa32.72■■■□□ 2.83
ERVK13-1-203ENST00000564340 CUX1P39880 1505 aa32.71■■■□□ 2.83
ERVK13-1-203ENST00000564340 CYB5RLQ6IPT4 315 aa32.63■■■□□ 2.81
ERVK13-1-203ENST00000564340 SNAPC4Q5SXM2 1469 aa32.59■■■□□ 2.81
ERVK13-1-203ENST00000564340 SUPT5HO00267 1087 aaKnown RBP32.59■■■□□ 2.81
ERVK13-1-203ENST00000564340 WDR97A6NE52 1622 aa32.55■■■□□ 2.8
ERVK13-1-203ENST00000564340 ARAP1Q96P48 1450 aa32.53■■■□□ 2.8
ERVK13-1-203ENST00000564340 GRIN2BQ13224 1484 aa32.48■■■□□ 2.79
ERVK13-1-203ENST00000564340 CHMP7Q8WUX9 453 aaPredicted RBP32.47■■■□□ 2.79
ERVK13-1-203ENST00000564340 MAGI1Q96QZ7 1491 aaPredicted RBP32.47■■■□□ 2.79
ERVK13-1-203ENST00000564340 CLASP1Q7Z460 1538 aa32.42■■■□□ 2.78
ERVK13-1-203ENST00000564340 SYNJ2O15056 1496 aa32.38■■■□□ 2.77
ERVK13-1-203ENST00000564340 GAPVD1Q14C86 1478 aa32.37■■■□□ 2.77
ERVK13-1-203ENST00000564340 SYNJ1O43426 1573 aa32.35■■■□□ 2.77
ERVK13-1-203ENST00000564340 ABCA10Q8WWZ4 1543 aa32.34■■■□□ 2.77
ERVK13-1-203ENST00000564340 PBRM1Q86U86 1689 aa32.3■■■□□ 2.76
ERVK13-1-203ENST00000564340 ABCA5Q8WWZ7 1642 aa32.28■■■□□ 2.76
ERVK13-1-203ENST00000564340 TRHP20396 242 aaPredicted RBP32.24■■■□□ 2.75
ERVK13-1-203ENST00000564340 WRNQ14191 1432 aaPredicted RBP eCLIP32.2■■■□□ 2.74
ERVK13-1-203ENST00000564340 TOP2BQ02880 1626 aa32.12■■■□□ 2.73
ERVK13-1-203ENST00000564340 BIVM-ERCC5R4GMW8 1640 aa32.11■■■□□ 2.73
ERVK13-1-203ENST00000564340 GRIN2AQ12879 1464 aa32.07■■■□□ 2.72
ERVK13-1-203ENST00000564340 ADAMTS12P58397 1594 aa32.04■■■□□ 2.72
ERVK13-1-203ENST00000564340 NUP160Q12769 1436 aa31.98■■■□□ 2.71
ERVK13-1-203ENST00000564340 CEP170Q5SW79 1584 aa31.97■■■□□ 2.71
ERVK13-1-203ENST00000564340 ERCC6L2Q5T890 1561 aa31.97■■■□□ 2.71
ERVK13-1-203ENST00000564340 FHAD1B1AJZ9 1412 aa31.96■■■□□ 2.71
ERVK13-1-203ENST00000564340 ERICH3Q5RHP9 1530 aa31.9■■■□□ 2.7
ERVK13-1-203ENST00000564340 SHROOM2Q13796 1616 aa31.81■■■□□ 2.68
ERVK13-1-203ENST00000564340 PRG4Q92954 1404 aaPredicted RBP31.68■■■□□ 2.66
ERVK13-1-203ENST00000564340 JPH4Q96JJ6 628 aa31.67■■■□□ 2.66
ERVK13-1-203ENST00000564340 RUSC2Q8N2Y8 1516 aa31.58■■■□□ 2.65
ERVK13-1-203ENST00000564340 IGF1RP08069 1367 aa31.57■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms