RNA–Protein interactions for RNA: ENST00000607093.1

LCE1C-202, Transcript of late cornified envelope 1C, humanhuman

APPRIS P2 BASIC

Gene LCE1C, Length 644 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCE1C-202ENST00000607093 NISCHQ9Y2I1 1504 aa45.93■■■■■ 4.94
LCE1C-202ENST00000607093 ABCC9O60706 1549 aa41.56■■■■■ 4.24
LCE1C-202ENST00000607093 CCDC180Q9P1Z9 1646 aa41.33■■■■■ 4.21
LCE1C-202ENST00000607093 RB1CC1Q8TDY2 1594 aa39.42■■■■□ 3.9
LCE1C-202ENST00000607093 DNAJC5BQ9UF47 199 aa39.15■■■■□ 3.86
LCE1C-202ENST00000607093 NACADO15069 1562 aa39.07■■■■□ 3.84
LCE1C-202ENST00000607093 DCAF8L2P0C7V8 631 aa38.87■■■■□ 3.81
LCE1C-202ENST00000607093 UNC13AQ9UPW8 1703 aa38.69■■■■□ 3.78
LCE1C-202ENST00000607093 PABPN1Q86U42 306 aaKnown RBP eCLIP38.64■■■■□ 3.78
LCE1C-202ENST00000607093 MYO15BQ96JP2 1530 aa38.39■■■■□ 3.74
LCE1C-202ENST00000607093 BICRAQ9NZM4 1560 aa38.34■■■■□ 3.73
LCE1C-202ENST00000607093 ZCCHC6Q5VYS8 1495 aaKnown RBP38.03■■■■□ 3.68
LCE1C-202ENST00000607093 DCAF1Q9Y4B6 1507 aa37.86■■■■□ 3.65
LCE1C-202ENST00000607093 SCRIBQ14160 1630 aa37.72■■■■□ 3.63
LCE1C-202ENST00000607093 SHROOM4Q9ULL8 1493 aa37.64■■■■□ 3.62
LCE1C-202ENST00000607093 CC2D2AQ9P2K1 1620 aa37.54■■■■□ 3.6
LCE1C-202ENST00000607093 CECR2Q9BXF3 1484 aa37.41■■■■□ 3.58
LCE1C-202ENST00000607093 EIF4G1Q04637 1599 aaKnown RBP37.38■■■■□ 3.58
LCE1C-202ENST00000607093 NCAPD3P42695 1498 aa36.04■■■■□ 3.36
LCE1C-202ENST00000607093 DNAJC5Q9H3Z4 198 aa36.01■■■■□ 3.36
LCE1C-202ENST00000607093 ATAD2BQ9ULI0 1458 aa35.95■■■■□ 3.35
LCE1C-202ENST00000607093 SMARCA4P51532 1647 aa35.92■■■■□ 3.34
LCE1C-202ENST00000607093 ERCC6Q03468 1493 aa35.86■■■■□ 3.33
LCE1C-202ENST00000607093 SMARCA2P51531 1590 aa35.82■■■■□ 3.32
LCE1C-202ENST00000607093 CUX2O14529 1486 aa35.81■■■■□ 3.32
LCE1C-202ENST00000607093 HMGXB3Q12766 1538 aa35.8■■■■□ 3.32
LCE1C-202ENST00000607093 NESP48681 1621 aa35.67■■■■□ 3.3
LCE1C-202ENST00000607093 BAZ1AQ9NRL2 1556 aaPredicted RBP35.65■■■■□ 3.3
LCE1C-202ENST00000607093 BAZ1BQ9UIG0 1483 aaKnown RBP35.6■■■■□ 3.29
LCE1C-202ENST00000607093 PEG3Q9GZU2 1588 aa35.51■■■■□ 3.27
LCE1C-202ENST00000607093 MROH2BQ7Z745 1585 aa35.43■■■■□ 3.26
LCE1C-202ENST00000607093 THOC2Q8NI27 1593 aaKnown RBP35.35■■■■□ 3.25
LCE1C-202ENST00000607093 LAMC3Q9Y6N6 1575 aa35.31■■■■□ 3.24
LCE1C-202ENST00000607093 KIF21AQ7Z4S6 1674 aa35.26■■■■□ 3.23
LCE1C-202ENST00000607093 PDS5BQ9NTI5 1447 aa35.06■■■■□ 3.2
LCE1C-202ENST00000607093 WIZO95785 1651 aa35.05■■■■□ 3.2
LCE1C-202ENST00000607093 CADPSQ9ULU8 1353 aa34.94■■■■□ 3.18
LCE1C-202ENST00000607093 MRC2Q9UBG0 1479 aa34.83■■■■□ 3.17
LCE1C-202ENST00000607093 WDR62O43379 1518 aa34.76■■■■□ 3.16
LCE1C-202ENST00000607093 CEP164Q9UPV0 1460 aa34.65■■■■□ 3.14
LCE1C-202ENST00000607093 FANCD2Q9BXW9 1451 aa34.59■■■■□ 3.13
LCE1C-202ENST00000607093 RSF1Q96T23 1441 aaPredicted RBP34.56■■■■□ 3.12
LCE1C-202ENST00000607093 CFTRP13569 1480 aa34.52■■■■□ 3.12
LCE1C-202ENST00000607093 TOP2AP11388 1531 aaKnown RBP34.51■■■■□ 3.12
LCE1C-202ENST00000607093 TRIM41Q8WV44 630 aa34.44■■■■□ 3.1
LCE1C-202ENST00000607093 URB2Q14146 1524 aaKnown RBP34.36■■■■□ 3.09
LCE1C-202ENST00000607093 PRDM2Q13029 1718 aa34.3■■■■□ 3.08
LCE1C-202ENST00000607093 CCDC88BA6NC98 1476 aa34.13■■■■□ 3.05
LCE1C-202ENST00000607093 OSCARQ8IYS5 282 aa34.11■■■■□ 3.05
LCE1C-202ENST00000607093 ZNF608Q9ULD9 1512 aaPredicted RBP33.99■■■■□ 3.03
LCE1C-202ENST00000607093 TOPBP1Q92547 1522 aa33.94■■■■□ 3.02
LCE1C-202ENST00000607093 IFT140Q96RY7 1462 aa33.93■■■■□ 3.02
LCE1C-202ENST00000607093 RIMBP3CA6NJZ7 1639 aa33.84■■■■□ 3.01
LCE1C-202ENST00000607093 RIMBP3BA6NNM3 1639 aa33.84■■■■□ 3.01
LCE1C-202ENST00000607093 RIMBP3Q9UFD9 1639 aa33.84■■■■□ 3.01
LCE1C-202ENST00000607093 EIF4G3O43432 1585 aaKnown RBP33.81■■■■□ 3
LCE1C-202ENST00000607093 DNMBPQ6XZF7 1577 aa33.8■■■■□ 3
LCE1C-202ENST00000607093 ABCC8Q09428 1581 aa33.75■■■□□ 2.99
LCE1C-202ENST00000607093 TARBP1Q13395 1621 aaKnown RBP33.68■■■□□ 2.98
LCE1C-202ENST00000607093 ARHGEF11O15085 1522 aa33.67■■■□□ 2.98
LCE1C-202ENST00000607093 CHD1O14646 1710 aa33.65■■■□□ 2.98
LCE1C-202ENST00000607093 AQRO60306 1485 aaKnown RBP eCLIP33.63■■■□□ 2.97
LCE1C-202ENST00000607093 POLA1P09884 1462 aaPredicted RBP33.57■■■□□ 2.97
LCE1C-202ENST00000607093 RAD54L2Q9Y4B4 1467 aa33.49■■■□□ 2.95
LCE1C-202ENST00000607093 FBLN2P98095 1184 aa33.43■■■□□ 2.94
LCE1C-202ENST00000607093 CYB5RLQ6IPT4 315 aa33.39■■■□□ 2.94
LCE1C-202ENST00000607093 SOGA1O94964 1423 aa33.37■■■□□ 2.93
LCE1C-202ENST00000607093 TDRD9Q8NDG6 1382 aaKnown RBP33.37■■■□□ 2.93
LCE1C-202ENST00000607093 FGD5Q6ZNL6 1462 aa33.35■■■□□ 2.93
LCE1C-202ENST00000607093 ARAP1Q96P48 1450 aa33.32■■■□□ 2.92
LCE1C-202ENST00000607093 CUX1P39880 1505 aa33.31■■■□□ 2.92
LCE1C-202ENST00000607093 SNAPC4Q5SXM2 1469 aa33.29■■■□□ 2.92
LCE1C-202ENST00000607093 WDR97A6NE52 1622 aa33.23■■■□□ 2.91
LCE1C-202ENST00000607093 CLASP1Q7Z460 1538 aa33.17■■■□□ 2.9
LCE1C-202ENST00000607093 MAGI1Q96QZ7 1491 aaPredicted RBP33.12■■■□□ 2.89
LCE1C-202ENST00000607093 SYNJ1O43426 1573 aa33.11■■■□□ 2.89
LCE1C-202ENST00000607093 GRIN2BQ13224 1484 aa33.11■■■□□ 2.89
LCE1C-202ENST00000607093 PBRM1Q86U86 1689 aa33.1■■■□□ 2.89
LCE1C-202ENST00000607093 TRHP20396 242 aaPredicted RBP33.09■■■□□ 2.89
LCE1C-202ENST00000607093 CHMP7Q8WUX9 453 aaPredicted RBP33.09■■■□□ 2.89
LCE1C-202ENST00000607093 SYNJ2O15056 1496 aa33.03■■■□□ 2.88
LCE1C-202ENST00000607093 GAPVD1Q14C86 1478 aa32.99■■■□□ 2.87
LCE1C-202ENST00000607093 ABCA5Q8WWZ7 1642 aa32.95■■■□□ 2.87
LCE1C-202ENST00000607093 SUPT5HO00267 1087 aaKnown RBP32.92■■■□□ 2.86
LCE1C-202ENST00000607093 ABCA10Q8WWZ4 1543 aa32.92■■■□□ 2.86
LCE1C-202ENST00000607093 BIVM-ERCC5R4GMW8 1640 aa32.73■■■□□ 2.83
LCE1C-202ENST00000607093 ADAMTS12P58397 1594 aa32.72■■■□□ 2.83
LCE1C-202ENST00000607093 GRIN2AQ12879 1464 aa32.71■■■□□ 2.83
LCE1C-202ENST00000607093 ERCC6L2Q5T890 1561 aa32.7■■■□□ 2.83
LCE1C-202ENST00000607093 WRNQ14191 1432 aaPredicted RBP eCLIP32.7■■■□□ 2.83
LCE1C-202ENST00000607093 TOP2BQ02880 1626 aa32.69■■■□□ 2.82
LCE1C-202ENST00000607093 CEP170Q5SW79 1584 aa32.66■■■□□ 2.82
LCE1C-202ENST00000607093 NUP160Q12769 1436 aa32.59■■■□□ 2.81
LCE1C-202ENST00000607093 FHAD1B1AJZ9 1412 aa32.52■■■□□ 2.8
LCE1C-202ENST00000607093 SHROOM2Q13796 1616 aa32.52■■■□□ 2.8
LCE1C-202ENST00000607093 ERICH3Q5RHP9 1530 aa32.49■■■□□ 2.79
LCE1C-202ENST00000607093 PRG4Q92954 1404 aaPredicted RBP32.31■■■□□ 2.76
LCE1C-202ENST00000607093 KIF13AQ9H1H9 1805 aa32.28■■■□□ 2.76
LCE1C-202ENST00000607093 RUSC2Q8N2Y8 1516 aa32.27■■■□□ 2.76
LCE1C-202ENST00000607093 AEBP2Q6ZN18 517 aaPredicted RBP32.24■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms