RNA–Protein interactions for RNA: ENST00000543146.2

CCT2-202, Transcript of chaperonin containing TCP1 subunit 2, humanhuman

TSL 2 BASIC

Gene CCT2, Length 2,189 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT2-202ENST00000543146 NISCHQ9Y2I1 1504 aa36.95■■■■□ 3.51
CCT2-202ENST00000543146 CCDC180Q9P1Z9 1646 aa32.05■■■□□ 2.72
CCT2-202ENST00000543146 ZCCHC6Q5VYS8 1495 aaKnown RBP31.02■■■□□ 2.56
CCT2-202ENST00000543146 DCAF8L2P0C7V8 631 aa30.89■■■□□ 2.54
CCT2-202ENST00000543146 ABCC9O60706 1549 aa30.64■■■□□ 2.5
CCT2-202ENST00000543146 SHROOM4Q9ULL8 1493 aa30.49■■■□□ 2.47
CCT2-202ENST00000543146 DCAF1Q9Y4B6 1507 aa30.39■■■□□ 2.45
CCT2-202ENST00000543146 MYO15BQ96JP2 1530 aa29.98■■■□□ 2.39
CCT2-202ENST00000543146 NACADO15069 1562 aa29.91■■■□□ 2.38
CCT2-202ENST00000543146 SCRIBQ14160 1630 aa29.74■■■□□ 2.35
CCT2-202ENST00000543146 RB1CC1Q8TDY2 1594 aa29.69■■■□□ 2.34
CCT2-202ENST00000543146 SUPT5HO00267 1087 aaKnown RBP29.33■■■□□ 2.29
CCT2-202ENST00000543146 UNC13AQ9UPW8 1703 aa29.15■■■□□ 2.26
CCT2-202ENST00000543146 PABPN1Q86U42 306 aaKnown RBP eCLIP29.02■■■□□ 2.24
CCT2-202ENST00000543146 BICRAQ9NZM4 1560 aa28.87■■■□□ 2.21
CCT2-202ENST00000543146 CECR2Q9BXF3 1484 aa28.86■■■□□ 2.21
CCT2-202ENST00000543146 RSF1Q96T23 1441 aaPredicted RBP28.75■■■□□ 2.19
CCT2-202ENST00000543146 MROH2BQ7Z745 1585 aa28.64■■■□□ 2.18
CCT2-202ENST00000543146 BAZ1AQ9NRL2 1556 aaPredicted RBP28.49■■■□□ 2.15
CCT2-202ENST00000543146 WIZO95785 1651 aa28.42■■■□□ 2.14
CCT2-202ENST00000543146 SMARCA4P51532 1647 aa28.4■■■□□ 2.14
CCT2-202ENST00000543146 EIF4G1Q04637 1599 aaKnown RBP28■■■□□ 2.07
CCT2-202ENST00000543146 TOP2AP11388 1531 aaKnown RBP27.99■■■□□ 2.07
CCT2-202ENST00000543146 ATAD2BQ9ULI0 1458 aa27.97■■■□□ 2.07
CCT2-202ENST00000543146 CHIC1Q5VXU3 224 aa27.96■■■□□ 2.07
CCT2-202ENST00000543146 PEG3Q9GZU2 1588 aa27.94■■■□□ 2.06
CCT2-202ENST00000543146 SMARCA2P51531 1590 aa27.86■■■□□ 2.05
CCT2-202ENST00000543146 CCDC88BA6NC98 1476 aa27.82■■■□□ 2.04
CCT2-202ENST00000543146 BAZ1BQ9UIG0 1483 aaKnown RBP27.82■■■□□ 2.04
CCT2-202ENST00000543146 NCAPD3P42695 1498 aa27.66■■■□□ 2.02
CCT2-202ENST00000543146 CC2D2AQ9P2K1 1620 aa27.62■■■□□ 2.01
CCT2-202ENST00000543146 HMGXB3Q12766 1538 aa27.56■■■□□ 2
CCT2-202ENST00000543146 TRIM41Q8WV44 630 aa27.46■■□□□ 1.99
CCT2-202ENST00000543146 ABCC8Q09428 1581 aa27.32■■□□□ 1.96
CCT2-202ENST00000543146 DNAJC5BQ9UF47 199 aa27.21■■□□□ 1.95
CCT2-202ENST00000543146 FAM9AQ8IZU1 332 aaPredicted RBP27.14■■□□□ 1.93
CCT2-202ENST00000543146 CFTRP13569 1480 aa27.08■■□□□ 1.93
CCT2-202ENST00000543146 LOC105371045A0A1W2PR82 267 aa27.05■■□□□ 1.92
CCT2-202ENST00000543146 WRNQ14191 1432 aaPredicted RBP eCLIP27.04■■□□□ 1.92
CCT2-202ENST00000543146 CADPSQ9ULU8 1353 aa27.03■■□□□ 1.92
CCT2-202ENST00000543146 SYNJ1O43426 1573 aa26.94■■□□□ 1.9
CCT2-202ENST00000543146 NESP48681 1621 aa26.92■■□□□ 1.9
CCT2-202ENST00000543146 EHMT2Q96KQ7 1210 aa26.9■■□□□ 1.9
CCT2-202ENST00000543146 SOGA1O94964 1423 aa26.82■■□□□ 1.88
CCT2-202ENST00000543146 PRDM2Q13029 1718 aa26.8■■□□□ 1.88
CCT2-202ENST00000543146 CUX1P39880 1505 aa26.76■■□□□ 1.87
CCT2-202ENST00000543146 TOP2BQ02880 1626 aa26.75■■□□□ 1.87
CCT2-202ENST00000543146 RUSC2Q8N2Y8 1516 aa26.75■■□□□ 1.87
CCT2-202ENST00000543146 FANCD2Q9BXW9 1451 aa26.74■■□□□ 1.87
CCT2-202ENST00000543146 LAMC3Q9Y6N6 1575 aa26.68■■□□□ 1.86
CCT2-202ENST00000543146 BIVM-ERCC5R4GMW8 1640 aa26.68■■□□□ 1.86
CCT2-202ENST00000543146 CSRNP3Q8WYN3 585 aa26.57■■□□□ 1.84
CCT2-202ENST00000543146 PDS5BQ9NTI5 1447 aa26.55■■□□□ 1.84
CCT2-202ENST00000543146 CEP164Q9UPV0 1460 aa26.54■■□□□ 1.84
CCT2-202ENST00000543146 EEA1Q15075 1411 aa26.51■■□□□ 1.83
CCT2-202ENST00000543146 KIF21AQ7Z4S6 1674 aa26.47■■□□□ 1.83
CCT2-202ENST00000543146 FGD5Q6ZNL6 1462 aa26.47■■□□□ 1.83
CCT2-202ENST00000543146 TOPBP1Q92547 1522 aa26.44■■□□□ 1.82
CCT2-202ENST00000543146 DNMBPQ6XZF7 1577 aa26.42■■□□□ 1.82
CCT2-202ENST00000543146 URB2Q14146 1524 aaKnown RBP26.42■■□□□ 1.82
CCT2-202ENST00000543146 RAD54L2Q9Y4B4 1467 aa26.34■■□□□ 1.81
CCT2-202ENST00000543146 UBTFP17480 764 aaKnown RBP26.33■■□□□ 1.81
CCT2-202ENST00000543146 POLA1P09884 1462 aaPredicted RBP26.33■■□□□ 1.81
CCT2-202ENST00000543146 KIF27Q86VH2 1401 aa26.32■■□□□ 1.8
CCT2-202ENST00000543146 CUX2O14529 1486 aa26.32■■□□□ 1.8
CCT2-202ENST00000543146 GOLGA3Q08378 1498 aa26.25■■□□□ 1.79
CCT2-202ENST00000543146 RAPGEF2Q9Y4G8 1499 aa26.23■■□□□ 1.79
CCT2-202ENST00000543146 ERCC6Q03468 1493 aa26.21■■□□□ 1.79
CCT2-202ENST00000543146 KIF21BO75037 1637 aa26.2■■□□□ 1.79
CCT2-202ENST00000543146 MRC2Q9UBG0 1479 aa26.2■■□□□ 1.79
CCT2-202ENST00000543146 TNIKQ9UKE5 1360 aa26.18■■□□□ 1.78
CCT2-202ENST00000543146 IGF1RP08069 1367 aa26.16■■□□□ 1.78
CCT2-202ENST00000543146 ABCA10Q8WWZ4 1543 aa26.15■■□□□ 1.78
CCT2-202ENST00000543146 PRXQ9BXM0 1461 aa26.14■■□□□ 1.78
CCT2-202ENST00000543146 TDRD9Q8NDG6 1382 aaKnown RBP26.11■■□□□ 1.77
CCT2-202ENST00000543146 CEP162Q5TB80 1403 aa26.11■■□□□ 1.77
CCT2-202ENST00000543146 RANGAP1P46060 587 aaPredicted RBP26.1■■□□□ 1.77
CCT2-202ENST00000543146 WDR62O43379 1518 aa26.03■■□□□ 1.76
CCT2-202ENST00000543146 CARMIL1Q5VZK9 1371 aa26.02■■□□□ 1.76
CCT2-202ENST00000543146 WDR97A6NE52 1622 aa26.02■■□□□ 1.76
CCT2-202ENST00000543146 ERICH3Q5RHP9 1530 aa26.01■■□□□ 1.75
CCT2-202ENST00000543146 TARBP1Q13395 1621 aaKnown RBP26.01■■□□□ 1.75
CCT2-202ENST00000543146 THOC2Q8NI27 1593 aaKnown RBP25.97■■□□□ 1.75
CCT2-202ENST00000543146 GAPVD1Q14C86 1478 aa25.95■■□□□ 1.74
CCT2-202ENST00000543146 AQRO60306 1485 aaKnown RBP eCLIP25.93■■□□□ 1.748e-7■■■■□ 22.8
CCT2-202ENST00000543146 ABCA5Q8WWZ7 1642 aa25.92■■□□□ 1.74
CCT2-202ENST00000543146 CLIP1P30622 1438 aa25.9■■□□□ 1.74
CCT2-202ENST00000543146 PPARGC1BQ86YN6 1023 aaKnown RBP25.89■■□□□ 1.74
CCT2-202ENST00000543146 ZNF608Q9ULD9 1512 aaPredicted RBP25.88■■□□□ 1.73
CCT2-202ENST00000543146 IFT140Q96RY7 1462 aa25.86■■□□□ 1.73
CCT2-202ENST00000543146 PCGF6Q9BYE7 350 aa25.79■■□□□ 1.72
CCT2-202ENST00000543146 CUL7Q14999 1698 aa25.79■■□□□ 1.72
CCT2-202ENST00000543146 PBRM1Q86U86 1689 aa25.74■■□□□ 1.71
CCT2-202ENST00000543146 GRIN2BQ13224 1484 aa25.71■■□□□ 1.71
CCT2-202ENST00000543146 TTBK1Q5TCY1 1321 aaPredicted RBP25.7■■□□□ 1.7
CCT2-202ENST00000543146 EIF4G3O43432 1585 aaKnown RBP25.68■■□□□ 1.7
CCT2-202ENST00000543146 ARAP1Q96P48 1450 aa25.64■■□□□ 1.7
CCT2-202ENST00000543146 ARHGAP35Q9NRY4 1499 aa25.63■■□□□ 1.69
CCT2-202ENST00000543146 FHAD1B1AJZ9 1412 aa25.63■■□□□ 1.69
CCT2-202ENST00000543146 VPS8Q8N3P4 1428 aa25.62■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms