RNA–Protein interactions for RNA: ENST00000545766.6

AP1S2-206, Transcript of adaptor related protein complex 1 subunit sigma 2, humanhuman

TSL 1 (best) BASIC

Gene AP1S2, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2-206ENST00000545766 NISCHQ9Y2I1 1504 aa45.7■■■■■ 4.91
AP1S2-206ENST00000545766 ABCC9O60706 1549 aa41.18■■■■■ 4.18
AP1S2-206ENST00000545766 CCDC180Q9P1Z9 1646 aa41.11■■■■■ 4.17
AP1S2-206ENST00000545766 RB1CC1Q8TDY2 1594 aa39.16■■■■□ 3.86
AP1S2-206ENST00000545766 NACADO15069 1562 aa38.85■■■■□ 3.81
AP1S2-206ENST00000545766 DNAJC5BQ9UF47 199 aa38.74■■■■□ 3.79
AP1S2-206ENST00000545766 DCAF8L2P0C7V8 631 aa38.52■■■■□ 3.76
AP1S2-206ENST00000545766 UNC13AQ9UPW8 1703 aa38.38■■■■□ 3.73
AP1S2-206ENST00000545766 PABPN1Q86U42 306 aaKnown RBP eCLIP38.29■■■■□ 3.72
AP1S2-206ENST00000545766 MYO15BQ96JP2 1530 aa38.27■■■■□ 3.72
AP1S2-206ENST00000545766 BICRAQ9NZM4 1560 aa38.06■■■■□ 3.68
AP1S2-206ENST00000545766 ZCCHC6Q5VYS8 1495 aaKnown RBP37.87■■■■□ 3.65
AP1S2-206ENST00000545766 DCAF1Q9Y4B6 1507 aa37.74■■■■□ 3.63
AP1S2-206ENST00000545766 SHROOM4Q9ULL8 1493 aa37.49■■■■□ 3.59
AP1S2-206ENST00000545766 SCRIBQ14160 1630 aa37.44■■■■□ 3.58
AP1S2-206ENST00000545766 CC2D2AQ9P2K1 1620 aa37.24■■■■□ 3.55
AP1S2-206ENST00000545766 EIF4G1Q04637 1599 aaKnown RBP37.12■■■■□ 3.53
AP1S2-206ENST00000545766 CECR2Q9BXF3 1484 aa37.11■■■■□ 3.53
AP1S2-206ENST00000545766 NCAPD3P42695 1498 aa35.85■■■■□ 3.33
AP1S2-206ENST00000545766 ATAD2BQ9ULI0 1458 aa35.74■■■■□ 3.31
AP1S2-206ENST00000545766 SMARCA4P51532 1647 aa35.71■■■■□ 3.31
AP1S2-206ENST00000545766 DNAJC5Q9H3Z4 198 aa35.63■■■■□ 3.29
AP1S2-206ENST00000545766 SMARCA2P51531 1590 aa35.63■■■■□ 3.29
AP1S2-206ENST00000545766 HMGXB3Q12766 1538 aa35.61■■■■□ 3.29
AP1S2-206ENST00000545766 CUX2O14529 1486 aa35.55■■■■□ 3.28
AP1S2-206ENST00000545766 ERCC6Q03468 1493 aa35.54■■■■□ 3.28
AP1S2-206ENST00000545766 BAZ1AQ9NRL2 1556 aaPredicted RBP35.47■■■■□ 3.27
AP1S2-206ENST00000545766 BAZ1BQ9UIG0 1483 aaKnown RBP35.38■■■■□ 3.25
AP1S2-206ENST00000545766 NESP48681 1621 aa35.37■■■■□ 3.25
AP1S2-206ENST00000545766 PEG3Q9GZU2 1588 aa35.36■■■■□ 3.25
AP1S2-206ENST00000545766 MROH2BQ7Z745 1585 aa35.22■■■■□ 3.23
AP1S2-206ENST00000545766 THOC2Q8NI27 1593 aaKnown RBP35.08■■■■□ 3.21
AP1S2-206ENST00000545766 LAMC3Q9Y6N6 1575 aa35.08■■■■□ 3.21
AP1S2-206ENST00000545766 KIF21AQ7Z4S6 1674 aa34.96■■■■□ 3.19
AP1S2-206ENST00000545766 PDS5BQ9NTI5 1447 aa34.84■■■■□ 3.17
AP1S2-206ENST00000545766 WIZO95785 1651 aa34.82■■■■□ 3.17
AP1S2-206ENST00000545766 CADPSQ9ULU8 1353 aa34.74■■■■□ 3.15
AP1S2-206ENST00000545766 MRC2Q9UBG0 1479 aa34.59■■■■□ 3.13
AP1S2-206ENST00000545766 WDR62O43379 1518 aa34.54■■■■□ 3.12
AP1S2-206ENST00000545766 CEP164Q9UPV0 1460 aa34.42■■■■□ 3.1
AP1S2-206ENST00000545766 RSF1Q96T23 1441 aaPredicted RBP34.42■■■■□ 3.1
AP1S2-206ENST00000545766 FANCD2Q9BXW9 1451 aa34.37■■■■□ 3.09
AP1S2-206ENST00000545766 TOP2AP11388 1531 aaKnown RBP34.35■■■■□ 3.09
AP1S2-206ENST00000545766 CFTRP13569 1480 aa34.34■■■■□ 3.09
AP1S2-206ENST00000545766 URB2Q14146 1524 aaKnown RBP34.13■■■■□ 3.05
AP1S2-206ENST00000545766 PRDM2Q13029 1718 aa34.09■■■■□ 3.05
AP1S2-206ENST00000545766 TRIM41Q8WV44 630 aa34.01■■■■□ 3.03
AP1S2-206ENST00000545766 CCDC88BA6NC98 1476 aa33.94■■■■□ 3.02
AP1S2-206ENST00000545766 OSCARQ8IYS5 282 aa33.83■■■■□ 3.01
AP1S2-206ENST00000545766 IFT140Q96RY7 1462 aa33.73■■■□□ 2.99
AP1S2-206ENST00000545766 TOPBP1Q92547 1522 aa33.73■■■□□ 2.99
AP1S2-206ENST00000545766 ZNF608Q9ULD9 1512 aaPredicted RBP33.72■■■□□ 2.99
AP1S2-206ENST00000545766 DNMBPQ6XZF7 1577 aa33.6■■■□□ 2.97
AP1S2-206ENST00000545766 ABCC8Q09428 1581 aa33.59■■■□□ 2.97
AP1S2-206ENST00000545766 EIF4G3O43432 1585 aaKnown RBP33.55■■■□□ 2.96
AP1S2-206ENST00000545766 RIMBP3CA6NJZ7 1639 aa33.53■■■□□ 2.96
AP1S2-206ENST00000545766 RIMBP3BA6NNM3 1639 aa33.53■■■□□ 2.96
AP1S2-206ENST00000545766 RIMBP3Q9UFD9 1639 aa33.53■■■□□ 2.96
AP1S2-206ENST00000545766 TARBP1Q13395 1621 aaKnown RBP33.46■■■□□ 2.95
AP1S2-206ENST00000545766 ARHGEF11O15085 1522 aa33.38■■■□□ 2.93
AP1S2-206ENST00000545766 POLA1P09884 1462 aaPredicted RBP33.37■■■□□ 2.93
AP1S2-206ENST00000545766 AQRO60306 1485 aaKnown RBP eCLIP33.37■■■□□ 2.93
AP1S2-206ENST00000545766 CHD1O14646 1710 aa33.36■■■□□ 2.93
AP1S2-206ENST00000545766 RAD54L2Q9Y4B4 1467 aa33.25■■■□□ 2.91
AP1S2-206ENST00000545766 SOGA1O94964 1423 aa33.17■■■□□ 2.9
AP1S2-206ENST00000545766 FGD5Q6ZNL6 1462 aa33.14■■■□□ 2.9
AP1S2-206ENST00000545766 TDRD9Q8NDG6 1382 aaKnown RBP33.13■■■□□ 2.89
AP1S2-206ENST00000545766 FBLN2P98095 1184 aa33.11■■■□□ 2.89
AP1S2-206ENST00000545766 CUX1P39880 1505 aa33.11■■■□□ 2.89
AP1S2-206ENST00000545766 WDR97A6NE52 1622 aa33.1■■■□□ 2.89
AP1S2-206ENST00000545766 CYB5RLQ6IPT4 315 aa33.06■■■□□ 2.88
AP1S2-206ENST00000545766 ARAP1Q96P48 1450 aa33.05■■■□□ 2.88
AP1S2-206ENST00000545766 SNAPC4Q5SXM2 1469 aa33.05■■■□□ 2.88
AP1S2-206ENST00000545766 CLASP1Q7Z460 1538 aa32.94■■■□□ 2.86
AP1S2-206ENST00000545766 MAGI1Q96QZ7 1491 aaPredicted RBP32.93■■■□□ 2.86
AP1S2-206ENST00000545766 GRIN2BQ13224 1484 aa32.92■■■□□ 2.86
AP1S2-206ENST00000545766 SYNJ1O43426 1573 aa32.88■■■□□ 2.85
AP1S2-206ENST00000545766 PBRM1Q86U86 1689 aa32.87■■■□□ 2.85
AP1S2-206ENST00000545766 CHMP7Q8WUX9 453 aaPredicted RBP32.85■■■□□ 2.85
AP1S2-206ENST00000545766 SYNJ2O15056 1496 aa32.83■■■□□ 2.85
AP1S2-206ENST00000545766 GAPVD1Q14C86 1478 aa32.79■■■□□ 2.84
AP1S2-206ENST00000545766 ABCA5Q8WWZ7 1642 aa32.76■■■□□ 2.83
AP1S2-206ENST00000545766 ABCA10Q8WWZ4 1543 aa32.76■■■□□ 2.83
AP1S2-206ENST00000545766 SUPT5HO00267 1087 aaKnown RBP32.73■■■□□ 2.83
AP1S2-206ENST00000545766 TRHP20396 242 aaPredicted RBP32.72■■■□□ 2.83
AP1S2-206ENST00000545766 BIVM-ERCC5R4GMW8 1640 aa32.57■■■□□ 2.8
AP1S2-206ENST00000545766 WRNQ14191 1432 aaPredicted RBP eCLIP32.55■■■□□ 2.8
AP1S2-206ENST00000545766 TOP2BQ02880 1626 aa32.54■■■□□ 2.8
AP1S2-206ENST00000545766 ADAMTS12P58397 1594 aa32.52■■■□□ 2.8
AP1S2-206ENST00000545766 GRIN2AQ12879 1464 aa32.51■■■□□ 2.79
AP1S2-206ENST00000545766 CEP170Q5SW79 1584 aa32.44■■■□□ 2.78
AP1S2-206ENST00000545766 ERCC6L2Q5T890 1561 aa32.43■■■□□ 2.78
AP1S2-206ENST00000545766 NUP160Q12769 1436 aa32.42■■■□□ 2.78
AP1S2-206ENST00000545766 FHAD1B1AJZ9 1412 aa32.35■■■□□ 2.77
AP1S2-206ENST00000545766 ERICH3Q5RHP9 1530 aa32.34■■■□□ 2.77
AP1S2-206ENST00000545766 SHROOM2Q13796 1616 aa32.33■■■□□ 2.77
AP1S2-206ENST00000545766 PRG4Q92954 1404 aaPredicted RBP32.09■■■□□ 2.73
AP1S2-206ENST00000545766 RUSC2Q8N2Y8 1516 aa32.06■■■□□ 2.72
AP1S2-206ENST00000545766 JPH4Q96JJ6 628 aa32.01■■■□□ 2.71
AP1S2-206ENST00000545766 KIF13AQ9H1H9 1805 aa31.99■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms