RNA–Protein interactions for RNA: ENST00000398659.8

EIPR1-202, Transcript of EARP complex and GARP complex interacting protein 1, humanhuman

TSL 5 BASIC

Gene EIPR1, Length 1,795 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIPR1-202ENST00000398659 NISCHQ9Y2I1 1504 aa37.9■■■■□ 3.66
EIPR1-202ENST00000398659 CCDC180Q9P1Z9 1646 aa33.23■■■□□ 2.91
EIPR1-202ENST00000398659 ZCCHC6Q5VYS8 1495 aaKnown RBP31.82■■■□□ 2.68
EIPR1-202ENST00000398659 ABCC9O60706 1549 aa31.48■■■□□ 2.63
EIPR1-202ENST00000398659 DCAF1Q9Y4B6 1507 aa31.39■■■□□ 2.62
EIPR1-202ENST00000398659 DCAF8L2P0C7V8 631 aa31.29■■■□□ 2.6
EIPR1-202ENST00000398659 MYO15BQ96JP2 1530 aa31.11■■■□□ 2.57
EIPR1-202ENST00000398659 NACADO15069 1562 aa30.97■■■□□ 2.55
EIPR1-202ENST00000398659 RB1CC1Q8TDY2 1594 aa30.75■■■□□ 2.51
EIPR1-202ENST00000398659 SHROOM4Q9ULL8 1493 aa30.69■■■□□ 2.5
EIPR1-202ENST00000398659 SCRIBQ14160 1630 aa30.45■■■□□ 2.47
EIPR1-202ENST00000398659 UNC13AQ9UPW8 1703 aa30.08■■■□□ 2.41
EIPR1-202ENST00000398659 BICRAQ9NZM4 1560 aa29.74■■■□□ 2.35
EIPR1-202ENST00000398659 PABPN1Q86U42 306 aaKnown RBP eCLIP29.59■■■□□ 2.33
EIPR1-202ENST00000398659 SUPT5HO00267 1087 aaKnown RBP29.44■■■□□ 2.3
EIPR1-202ENST00000398659 CECR2Q9BXF3 1484 aa29.39■■■□□ 2.3
EIPR1-202ENST00000398659 BAZ1AQ9NRL2 1556 aaPredicted RBP29.33■■■□□ 2.29
EIPR1-202ENST00000398659 RSF1Q96T23 1441 aaPredicted RBP29.29■■■□□ 2.28
EIPR1-202ENST00000398659 MROH2BQ7Z745 1585 aa29.23■■■□□ 2.27
EIPR1-202ENST00000398659 SMARCA4P51532 1647 aa29.19■■■□□ 2.26
EIPR1-202ENST00000398659 WIZO95785 1651 aa29■■■□□ 2.23
EIPR1-202ENST00000398659 EIF4G1Q04637 1599 aaKnown RBP28.91■■■□□ 2.22
EIPR1-202ENST00000398659 PEG3Q9GZU2 1588 aa28.87■■■□□ 2.21
EIPR1-202ENST00000398659 SMARCA2P51531 1590 aa28.78■■■□□ 2.2
EIPR1-202ENST00000398659 TOP2AP11388 1531 aaKnown RBP28.75■■■□□ 2.19
EIPR1-202ENST00000398659 ATAD2BQ9ULI0 1458 aa28.74■■■□□ 2.19
EIPR1-202ENST00000398659 BAZ1BQ9UIG0 1483 aaKnown RBP28.61■■■□□ 2.17
EIPR1-202ENST00000398659 HMGXB3Q12766 1538 aa28.53■■■□□ 2.16
EIPR1-202ENST00000398659 NCAPD3P42695 1498 aa28.53■■■□□ 2.16
EIPR1-202ENST00000398659 CC2D2AQ9P2K1 1620 aa28.52■■■□□ 2.16
EIPR1-202ENST00000398659 CCDC88BA6NC98 1476 aa28.39■■■□□ 2.14
EIPR1-202ENST00000398659 CHIC1Q5VXU3 224 aa28.07■■■□□ 2.08
EIPR1-202ENST00000398659 CFTRP13569 1480 aa27.85■■■□□ 2.05
EIPR1-202ENST00000398659 DNAJC5BQ9UF47 199 aa27.81■■■□□ 2.04
EIPR1-202ENST00000398659 PRDM2Q13029 1718 aa27.78■■■□□ 2.04
EIPR1-202ENST00000398659 CADPSQ9ULU8 1353 aa27.78■■■□□ 2.04
EIPR1-202ENST00000398659 TRIM41Q8WV44 630 aa27.75■■■□□ 2.03
EIPR1-202ENST00000398659 ABCC8Q09428 1581 aa27.73■■■□□ 2.03
EIPR1-202ENST00000398659 LAMC3Q9Y6N6 1575 aa27.65■■■□□ 2.02
EIPR1-202ENST00000398659 WRNQ14191 1432 aaPredicted RBP eCLIP27.62■■■□□ 2.01
EIPR1-202ENST00000398659 NESP48681 1621 aa27.54■■■□□ 2
EIPR1-202ENST00000398659 FANCD2Q9BXW9 1451 aa27.49■■□□□ 1.99
EIPR1-202ENST00000398659 SYNJ1O43426 1573 aa27.49■■□□□ 1.99
EIPR1-202ENST00000398659 TOP2BQ02880 1626 aa27.44■■□□□ 1.98
EIPR1-202ENST00000398659 PDS5BQ9NTI5 1447 aa27.43■■□□□ 1.98
EIPR1-202ENST00000398659 BIVM-ERCC5R4GMW8 1640 aa27.42■■□□□ 1.98
EIPR1-202ENST00000398659 CEP164Q9UPV0 1460 aa27.36■■□□□ 1.97
EIPR1-202ENST00000398659 CUX1P39880 1505 aa27.36■■□□□ 1.97
EIPR1-202ENST00000398659 KIF21AQ7Z4S6 1674 aa27.28■■□□□ 1.96
EIPR1-202ENST00000398659 DNMBPQ6XZF7 1577 aa27.24■■□□□ 1.95
EIPR1-202ENST00000398659 EEA1Q15075 1411 aa27.18■■□□□ 1.94
EIPR1-202ENST00000398659 FAM9AQ8IZU1 332 aaPredicted RBP27.17■■□□□ 1.94
EIPR1-202ENST00000398659 TOPBP1Q92547 1522 aa27.16■■□□□ 1.94
EIPR1-202ENST00000398659 SOGA1O94964 1423 aa27.14■■□□□ 1.94
EIPR1-202ENST00000398659 URB2Q14146 1524 aaKnown RBP27.12■■□□□ 1.93
EIPR1-202ENST00000398659 FGD5Q6ZNL6 1462 aa27.12■■□□□ 1.93
EIPR1-202ENST00000398659 ERCC6Q03468 1493 aa27.08■■□□□ 1.93
EIPR1-202ENST00000398659 MRC2Q9UBG0 1479 aa27.08■■□□□ 1.93
EIPR1-202ENST00000398659 RUSC2Q8N2Y8 1516 aa27.02■■□□□ 1.92
EIPR1-202ENST00000398659 POLA1P09884 1462 aaPredicted RBP27.01■■□□□ 1.91
EIPR1-202ENST00000398659 KIF27Q86VH2 1401 aa26.96■■□□□ 1.91
EIPR1-202ENST00000398659 CSRNP3Q8WYN3 585 aa26.95■■□□□ 1.9
EIPR1-202ENST00000398659 WDR62O43379 1518 aa26.95■■□□□ 1.9
EIPR1-202ENST00000398659 LOC105371045A0A1W2PR82 267 aa26.94■■□□□ 1.9
EIPR1-202ENST00000398659 CUX2O14529 1486 aa26.9■■□□□ 1.9
EIPR1-202ENST00000398659 THOC2Q8NI27 1593 aaKnown RBP26.9■■□□□ 1.9
EIPR1-202ENST00000398659 ABCA10Q8WWZ4 1543 aa26.89■■□□□ 1.9
EIPR1-202ENST00000398659 RAD54L2Q9Y4B4 1467 aa26.88■■□□□ 1.89
EIPR1-202ENST00000398659 WDR97A6NE52 1622 aa26.84■■□□□ 1.89
EIPR1-202ENST00000398659 KIF21BO75037 1637 aa26.82■■□□□ 1.88
EIPR1-202ENST00000398659 TARBP1Q13395 1621 aaKnown RBP26.78■■□□□ 1.88
EIPR1-202ENST00000398659 GOLGA3Q08378 1498 aa26.77■■□□□ 1.88
EIPR1-202ENST00000398659 EHMT2Q96KQ7 1210 aa26.76■■□□□ 1.87
EIPR1-202ENST00000398659 IFT140Q96RY7 1462 aa26.72■■□□□ 1.87
EIPR1-202ENST00000398659 ABCA5Q8WWZ7 1642 aa26.7■■□□□ 1.86
EIPR1-202ENST00000398659 PRXQ9BXM0 1461 aa26.69■■□□□ 1.86
EIPR1-202ENST00000398659 ERICH3Q5RHP9 1530 aa26.68■■□□□ 1.86
EIPR1-202ENST00000398659 IGF1RP08069 1367 aa26.66■■□□□ 1.86
EIPR1-202ENST00000398659 GAPVD1Q14C86 1478 aa26.64■■□□□ 1.85
EIPR1-202ENST00000398659 TDRD9Q8NDG6 1382 aaKnown RBP26.64■■□□□ 1.85
EIPR1-202ENST00000398659 RAPGEF2Q9Y4G8 1499 aa26.62■■□□□ 1.85
EIPR1-202ENST00000398659 TNIKQ9UKE5 1360 aa26.61■■□□□ 1.85
EIPR1-202ENST00000398659 UBTFP17480 764 aaKnown RBP26.61■■□□□ 1.85
EIPR1-202ENST00000398659 CUL7Q14999 1698 aa26.6■■□□□ 1.85
EIPR1-202ENST00000398659 CARMIL1Q5VZK9 1371 aa26.56■■□□□ 1.84
EIPR1-202ENST00000398659 PBRM1Q86U86 1689 aa26.54■■□□□ 1.84
EIPR1-202ENST00000398659 ZNF608Q9ULD9 1512 aaPredicted RBP26.5■■□□□ 1.83
EIPR1-202ENST00000398659 AQRO60306 1485 aaKnown RBP eCLIP26.5■■□□□ 1.832e-8■■■■■ 29.2
EIPR1-202ENST00000398659 EIF4G3O43432 1585 aaKnown RBP26.49■■□□□ 1.83
EIPR1-202ENST00000398659 GRIN2BQ13224 1484 aa26.48■■□□□ 1.83
EIPR1-202ENST00000398659 CEP162Q5TB80 1403 aa26.45■■□□□ 1.82
EIPR1-202ENST00000398659 ADAMTS12P58397 1594 aa26.38■■□□□ 1.81
EIPR1-202ENST00000398659 FHAD1B1AJZ9 1412 aa26.36■■□□□ 1.81
EIPR1-202ENST00000398659 SNAPC4Q5SXM2 1469 aa26.3■■□□□ 1.8
EIPR1-202ENST00000398659 CLIP1P30622 1438 aa26.3■■□□□ 1.8
EIPR1-202ENST00000398659 MAGI1Q96QZ7 1491 aaPredicted RBP26.3■■□□□ 1.8
EIPR1-202ENST00000398659 CTTNBP2Q8WZ74 1663 aa26.27■■□□□ 1.8
EIPR1-202ENST00000398659 SYNJ2O15056 1496 aa26.18■■□□□ 1.78
EIPR1-202ENST00000398659 RANGAP1P46060 587 aaPredicted RBP26.17■■□□□ 1.78
EIPR1-202ENST00000398659 GRIN2AQ12879 1464 aa26.14■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms