RNA–Protein interactions for RNA: ENST00000338305.6

LRFN2-201, Transcript of leucine rich repeat and fibronectin type III domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN2, Length 3,270 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN2-201ENST00000338305 NISCHQ9Y2I1 1504 aa29.64■■■□□ 2.34
LRFN2-201ENST00000338305 SHROOM4Q9ULL8 1493 aa27.44■■□□□ 1.98
LRFN2-201ENST00000338305 SUPT5HO00267 1087 aaKnown RBP27.4■■□□□ 1.98
LRFN2-201ENST00000338305 HRCP23327 699 aa27.2■■□□□ 1.95
LRFN2-201ENST00000338305 PPARGC1BQ86YN6 1023 aaKnown RBP27.19■■□□□ 1.94
LRFN2-201ENST00000338305 PCGF6Q9BYE7 350 aa27.13■■□□□ 1.93
LRFN2-201ENST00000338305 MYO15BQ96JP2 1530 aa26.48■■□□□ 1.83
LRFN2-201ENST00000338305 CHIC1Q5VXU3 224 aa26.41■■□□□ 1.82
LRFN2-201ENST00000338305 LOC105371045A0A1W2PR82 267 aa26.23■■□□□ 1.79
LRFN2-201ENST00000338305 DCAF8L2P0C7V8 631 aa26.15■■□□□ 1.78
LRFN2-201ENST00000338305 PELP1Q8IZL8 1130 aaKnown RBP25.98■■□□□ 1.75
LRFN2-201ENST00000338305 SCAF1Q9H7N4 1312 aaKnown RBP25.93■■□□□ 1.74
LRFN2-201ENST00000338305 CCDC180Q9P1Z9 1646 aa25.85■■□□□ 1.73
LRFN2-201ENST00000338305 EHMT2Q96KQ7 1210 aa25.83■■□□□ 1.73
LRFN2-201ENST00000338305 TRIM26Q12899 539 aaPredicted RBP25.79■■□□□ 1.72
LRFN2-201ENST00000338305 FAM9AQ8IZU1 332 aaPredicted RBP25.52■■□□□ 1.68
LRFN2-201ENST00000338305 DCAF1Q9Y4B6 1507 aa25.49■■□□□ 1.67
LRFN2-201ENST00000338305 ZEB1P37275 1124 aaPredicted RBP25.39■■□□□ 1.66
LRFN2-201ENST00000338305 NEUROD1Q13562 356 aa25.29■■□□□ 1.64
LRFN2-201ENST00000338305 GTF3C3Q9Y5Q9 886 aa25.24■■□□□ 1.63
LRFN2-201ENST00000338305 ACIN1Q9UKV3 1341 aaKnown RBP25.18■■□□□ 1.62
LRFN2-201ENST00000338305 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.15■■□□□ 1.62
LRFN2-201ENST00000338305 TTBK1Q5TCY1 1321 aaPredicted RBP25.13■■□□□ 1.61
LRFN2-201ENST00000338305 ZCCHC6Q5VYS8 1495 aaKnown RBP25.11■■□□□ 1.61
LRFN2-201ENST00000338305 CCER1Q8TC90 406 aaPredicted RBP25.04■■□□□ 1.6
LRFN2-201ENST00000338305 TRIM41Q8WV44 630 aa25.03■■□□□ 1.6
LRFN2-201ENST00000338305 YTHDC1Q96MU7 727 aaKnown RBP25.02■■□□□ 1.6
LRFN2-201ENST00000338305 CENPBP07199 599 aaPredicted RBP24.93■■□□□ 1.58
LRFN2-201ENST00000338305 DIEXFQ68CQ4 756 aaKnown RBP24.9■■□□□ 1.58
LRFN2-201ENST00000338305 MYT1Q01538 1121 aa24.82■■□□□ 1.56
LRFN2-201ENST00000338305 MIER1Q8N108 512 aa24.31■■□□□ 1.48
LRFN2-201ENST00000338305 ZNF316A6NFI3 1004 aaPredicted RBP24.26■■□□□ 1.47
LRFN2-201ENST00000338305 ABCC9O60706 1549 aa24.2■■□□□ 1.47
LRFN2-201ENST00000338305 HNRNPUL2Q1KMD3 747 aaKnown RBP24.13■■□□□ 1.45
LRFN2-201ENST00000338305 RSF1Q96T23 1441 aaPredicted RBP24.1■■□□□ 1.45
LRFN2-201ENST00000338305 RB1CC1Q8TDY2 1594 aa24.04■■□□□ 1.44
LRFN2-201ENST00000338305 NACADO15069 1562 aa24.02■■□□□ 1.44
LRFN2-201ENST00000338305 UBTFP17480 764 aaKnown RBP23.93■■□□□ 1.42
LRFN2-201ENST00000338305 RANGAP1P46060 587 aaPredicted RBP23.92■■□□□ 1.42
LRFN2-201ENST00000338305 BCANQ96GW7 911 aa23.88■■□□□ 1.41
LRFN2-201ENST00000338305 SCRIBQ14160 1630 aa23.83■■□□□ 1.41
LRFN2-201ENST00000338305 SUPT16HQ9Y5B9 1047 aaKnown RBP23.81■■□□□ 1.4
LRFN2-201ENST00000338305 BCL11AQ9H165 835 aa23.81■■□□□ 1.4
LRFN2-201ENST00000338305 TSHZ2Q9NRE2 1034 aa23.71■■□□□ 1.39
LRFN2-201ENST00000338305 ANP32EQ9BTT0 268 aa23.71■■□□□ 1.39
LRFN2-201ENST00000338305 CSRNP3Q8WYN3 585 aa23.66■■□□□ 1.38
LRFN2-201ENST00000338305 CEP162Q5TB80 1403 aa23.63■■□□□ 1.37
LRFN2-201ENST00000338305 CECR2Q9BXF3 1484 aa23.58■■□□□ 1.36
LRFN2-201ENST00000338305 KCNH8Q96L42 1107 aa23.51■■□□□ 1.35
LRFN2-201ENST00000338305 APLP2Q06481 763 aa23.5■■□□□ 1.35
LRFN2-201ENST00000338305 SOGA1O94964 1423 aa23.45■■□□□ 1.35
LRFN2-201ENST00000338305 FKBP8Q14318 412 aa23.43■■□□□ 1.34
LRFN2-201ENST00000338305 ITGAEP38570 1179 aa23.43■■□□□ 1.34
LRFN2-201ENST00000338305 CCDC88BA6NC98 1476 aa23.42■■□□□ 1.34
LRFN2-201ENST00000338305 ABCC8Q09428 1581 aa23.41■■□□□ 1.34
LRFN2-201ENST00000338305 MROH2BQ7Z745 1585 aa23.39■■□□□ 1.33
LRFN2-201ENST00000338305 WRNQ14191 1432 aaPredicted RBP eCLIP23.33■■□□□ 1.33
LRFN2-201ENST00000338305 UNC13AQ9UPW8 1703 aa23.32■■□□□ 1.32
LRFN2-201ENST00000338305 RUSC2Q8N2Y8 1516 aa23.32■■□□□ 1.32
LRFN2-201ENST00000338305 WIZO95785 1651 aa23.3■■□□□ 1.32
LRFN2-201ENST00000338305 TNIKQ9UKE5 1360 aa23.27■■□□□ 1.32
LRFN2-201ENST00000338305 RBM19Q9Y4C8 960 aaKnown RBP23.21■■□□□ 1.31
LRFN2-201ENST00000338305 TRIM52Q96A61 297 aa23.2■■□□□ 1.3
LRFN2-201ENST00000338305 NEFLP07196 543 aa23.18■■□□□ 1.3
LRFN2-201ENST00000338305 CLSPNQ9HAW4 1339 aa23.17■■□□□ 1.3
LRFN2-201ENST00000338305 HIRIP3Q9BW71 556 aaPredicted RBP23.17■■□□□ 1.3
LRFN2-201ENST00000338305 DDX10Q13206 875 aaKnown RBP23.15■■□□□ 1.3
LRFN2-201ENST00000338305 ERICH6Q7L0X2 663 aa23.11■■□□□ 1.29
LRFN2-201ENST00000338305 IRX6P78412 446 aaPredicted RBP23.09■■□□□ 1.29
LRFN2-201ENST00000338305 BICRAQ9NZM4 1560 aa23.05■■□□□ 1.28
LRFN2-201ENST00000338305 CLIP1P30622 1438 aa23.03■■□□□ 1.28
LRFN2-201ENST00000338305 DHX57Q6P158 1386 aaKnown RBP22.99■■□□□ 1.27
LRFN2-201ENST00000338305 GOLGA3Q08378 1498 aa22.99■■□□□ 1.27
LRFN2-201ENST00000338305 MSH5O43196 834 aa22.97■■□□□ 1.27
LRFN2-201ENST00000338305 KANK4Q5T7N3 995 aaPredicted RBP22.92■■□□□ 1.26
LRFN2-201ENST00000338305 SIN3AQ96ST3 1273 aa22.84■■□□□ 1.25
LRFN2-201ENST00000338305 VPS8Q8N3P4 1428 aa22.82■■□□□ 1.24
LRFN2-201ENST00000338305 BAZ1AQ9NRL2 1556 aaPredicted RBP22.78■■□□□ 1.24
LRFN2-201ENST00000338305 NBR1Q14596 966 aa22.76■■□□□ 1.23
LRFN2-201ENST00000338305 EIF4G1Q04637 1599 aaKnown RBP22.76■■□□□ 1.23
LRFN2-201ENST00000338305 EEA1Q15075 1411 aa22.75■■□□□ 1.23
LRFN2-201ENST00000338305 CDK11AQ9UQ88 783 aaPredicted RBP22.75■■□□□ 1.23
LRFN2-201ENST00000338305 ANP32CO43423 234 aa22.73■■□□□ 1.23
LRFN2-201ENST00000338305 PABPN1Q86U42 306 aaKnown RBP eCLIP22.7■■□□□ 1.23
LRFN2-201ENST00000338305 CEP164Q9UPV0 1460 aa22.7■■□□□ 1.22
LRFN2-201ENST00000338305 PRKCSHP14314 528 aaPredicted RBP22.7■■□□□ 1.22
LRFN2-201ENST00000338305 RAPGEF2Q9Y4G8 1499 aa22.7■■□□□ 1.22
LRFN2-201ENST00000338305 HNRNPUQ00839 825 aaKnown RBP eCLIP22.69■■□□□ 1.22
LRFN2-201ENST00000338305 ATP1B4Q9UN42 357 aaPredicted RBP22.69■■□□□ 1.22
LRFN2-201ENST00000338305 DEKP35659 375 aaKnown RBP22.66■■□□□ 1.22
LRFN2-201ENST00000338305 SMARCA4P51532 1647 aa22.65■■□□□ 1.22
LRFN2-201ENST00000338305 FAM50AQ14320 339 aaKnown RBP22.65■■□□□ 1.22
LRFN2-201ENST00000338305 CNGB1Q14028 1251 aaPredicted RBP22.63■■□□□ 1.21
LRFN2-201ENST00000338305 SMARCA2P51531 1590 aa22.59■■□□□ 1.21
LRFN2-201ENST00000338305 TOP2AP11388 1531 aaKnown RBP22.57■■□□□ 1.2
LRFN2-201ENST00000338305 SENP3-EIF4A1A0A087X0R7 540 aa22.55■■□□□ 1.2
LRFN2-201ENST00000338305 RAB3GAP2Q9H2M9 1393 aa22.54■■□□□ 1.2
LRFN2-201ENST00000338305 B4GALNT3Q6L9W6 998 aa22.54■■□□□ 1.2
LRFN2-201ENST00000338305 KIF21BO75037 1637 aa22.54■■□□□ 1.2
LRFN2-201ENST00000338305 ANO8Q9HCE9 1232 aaPredicted RBP22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms