Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HOXA13P31271 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC18.89■□□□□ 0.61
HOXA13P31271 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
HOXA13P31271 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC18.89■□□□□ 0.61
HOXA13P31271 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HOXA13P31271 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HOXA13P31271 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HOXA13P31271 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC18.89■□□□□ 0.61
HOXA13P31271 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC18.89■□□□□ 0.61
HOXA13P31271 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
HOXA13P31271 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC18.89■□□□□ 0.61
HOXA13P31271 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC18.89■□□□□ 0.61
HOXA13P31271 AC069262.1-201ENST00000539058 672 ntBASIC18.89■□□□□ 0.61
HOXA13P31271 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC18.89■□□□□ 0.61
HOXA13P31271 AC073389.1-201ENST00000595595 795 ntBASIC18.89■□□□□ 0.61
HOXA13P31271 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HOXA13P31271 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HOXA13P31271 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC18.89■□□□□ 0.61
HOXA13P31271 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HOXA13P31271 AC006538.1-201ENST00000567905 1585 ntBASIC18.89■□□□□ 0.61
HOXA13P31271 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
HOXA13P31271 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
HOXA13P31271 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC18.89■□□□□ 0.61
HOXA13P31271 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
HOXA13P31271 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC18.88■□□□□ 0.61
HOXA13P31271 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC18.88■□□□□ 0.61
HOXA13P31271 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HOXA13P31271 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
HOXA13P31271 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
HOXA13P31271 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
HOXA13P31271 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HOXA13P31271 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
HOXA13P31271 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC18.88■□□□□ 0.61
HOXA13P31271 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC18.88■□□□□ 0.61
HOXA13P31271 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
HOXA13P31271 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HOXA13P31271 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HOXA13P31271 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
HOXA13P31271 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HOXA13P31271 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HOXA13P31271 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
HOXA13P31271 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC18.88■□□□□ 0.61
HOXA13P31271 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HOXA13P31271 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HOXA13P31271 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
HOXA13P31271 GPAA1P2-202ENST00000606848 1787 ntBASIC18.88■□□□□ 0.61
HOXA13P31271 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC18.88■□□□□ 0.61
HOXA13P31271 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HOXA13P31271 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
HOXA13P31271 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HOXA13P31271 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC18.88■□□□□ 0.61
HOXA13P31271 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
HOXA13P31271 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC18.88■□□□□ 0.61
HOXA13P31271 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HOXA13P31271 AC092171.3-201ENST00000610122 2651 ntBASIC18.87■□□□□ 0.61
HOXA13P31271 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
HOXA13P31271 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC18.87■□□□□ 0.61
HOXA13P31271 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HOXA13P31271 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
HOXA13P31271 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HOXA13P31271 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
HOXA13P31271 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC18.87■□□□□ 0.61
HOXA13P31271 TUBB3P1-201ENST00000405796 1332 ntBASIC18.87■□□□□ 0.61
HOXA13P31271 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HOXA13P31271 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC18.87■□□□□ 0.61
HOXA13P31271 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC18.87■□□□□ 0.61
HOXA13P31271 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC18.87■□□□□ 0.61
HOXA13P31271 CNN2P2-201ENST00000443536 909 ntBASIC18.87■□□□□ 0.61
HOXA13P31271 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC18.87■□□□□ 0.61
HOXA13P31271 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HOXA13P31271 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC18.87■□□□□ 0.61
HOXA13P31271 CNN2P3-201ENST00000450201 906 ntBASIC18.87■□□□□ 0.61
HOXA13P31271 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC18.87■□□□□ 0.61
HOXA13P31271 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC18.87■□□□□ 0.61
HOXA13P31271 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HOXA13P31271 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC18.87■□□□□ 0.61
HOXA13P31271 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
HOXA13P31271 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HOXA13P31271 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HOXA13P31271 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
HOXA13P31271 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
HOXA13P31271 MIR6080-201ENST00000617359 66 ntBASIC18.87■□□□□ 0.61
HOXA13P31271 AL136317.3-201ENST00000618497 906 ntBASIC18.87■□□□□ 0.61
HOXA13P31271 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
HOXA13P31271 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HOXA13P31271 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
HOXA13P31271 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC18.86■□□□□ 0.61
HOXA13P31271 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
HOXA13P31271 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC18.86■□□□□ 0.61
HOXA13P31271 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
HOXA13P31271 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
HOXA13P31271 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HOXA13P31271 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HOXA13P31271 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC18.86■□□□□ 0.61
HOXA13P31271 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
HOXA13P31271 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC18.86■□□□□ 0.61
HOXA13P31271 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC18.86■□□□□ 0.61
HOXA13P31271 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC18.86■□□□□ 0.61
HOXA13P31271 MIR770-201ENST00000390219 98 ntBASIC18.86■□□□□ 0.61
HOXA13P31271 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms