RNA–Protein interactions for RNA: ENST00000361762.3

PCDH7-201, Transcript of protocadherin 7, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDH7, Length 6,403 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7-201ENST00000361762 DCAF8L2P0C7V8 631 aa30.59■■■□□ 2.49
PCDH7-201ENST00000361762 SUPT5HO00267 1087 aaKnown RBP28.75■■■□□ 2.19
PCDH7-201ENST00000361762 EHMT2Q96KQ7 1210 aa28.48■■■□□ 2.15
PCDH7-201ENST00000361762 SHROOM4Q9ULL8 1493 aa28.34■■■□□ 2.13
PCDH7-201ENST00000361762 NISCHQ9Y2I1 1504 aa27.85■■■□□ 2.05
PCDH7-201ENST00000361762 PELP1Q8IZL8 1130 aaKnown RBP27.74■■■□□ 2.03
PCDH7-201ENST00000361762 TTBK1Q5TCY1 1321 aaPredicted RBP27.43■■□□□ 1.98
PCDH7-201ENST00000361762 FAM9AQ8IZU1 332 aaPredicted RBP27.31■■□□□ 1.96
PCDH7-201ENST00000361762 PCGF6Q9BYE7 350 aa27.25■■□□□ 1.95
PCDH7-201ENST00000361762 APLP2Q06481 763 aa27.24■■□□□ 1.95
PCDH7-201ENST00000361762 RANGAP1P46060 587 aaPredicted RBP27.13■■□□□ 1.93
PCDH7-201ENST00000361762 ERICH6Q7L0X2 663 aa26.97■■□□□ 1.91
PCDH7-201ENST00000361762 MYT1Q01538 1121 aa26.91■■□□□ 1.9
PCDH7-201ENST00000361762 CENPBP07199 599 aaPredicted RBP26.83■■□□□ 1.89
PCDH7-201ENST00000361762 ATP1B4Q9UN42 357 aaPredicted RBP26.78■■□□□ 1.88
PCDH7-201ENST00000361762 YTHDC1Q96MU7 727 aaKnown RBP26.51■■□□□ 1.83
PCDH7-201ENST00000361762 CCER1Q8TC90 406 aaPredicted RBP26.44■■□□□ 1.82
PCDH7-201ENST00000361762 ZEB1P37275 1124 aaPredicted RBP26.4■■□□□ 1.82
PCDH7-201ENST00000361762 TRIM41Q8WV44 630 aa26.39■■□□□ 1.81
PCDH7-201ENST00000361762 UBTFP17480 764 aaKnown RBP26.28■■□□□ 1.8
PCDH7-201ENST00000361762 PPARGC1BQ86YN6 1023 aaKnown RBP26.21■■□□□ 1.79
PCDH7-201ENST00000361762 NEFLP07196 543 aa26.02■■□□□ 1.76
PCDH7-201ENST00000361762 HRCP23327 699 aa26■■□□□ 1.75
PCDH7-201ENST00000361762 MYT1LQ9UL68 1186 aa25.8■■□□□ 1.72
PCDH7-201ENST00000361762 ITGAEP38570 1179 aa25.75■■□□□ 1.71
PCDH7-201ENST00000361762 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.7■■□□□ 1.71
PCDH7-201ENST00000361762 HNRNPUL2Q1KMD3 747 aaKnown RBP25.7■■□□□ 1.71
PCDH7-201ENST00000361762 POLR3GLQ9BT43 218 aa25.69■■□□□ 1.7
PCDH7-201ENST00000361762 CHIC1Q5VXU3 224 aa25.64■■□□□ 1.7
PCDH7-201ENST00000361762 TRIM26Q12899 539 aaPredicted RBP25.64■■□□□ 1.69
PCDH7-201ENST00000361762 CNGB1Q14028 1251 aaPredicted RBP25.63■■□□□ 1.69
PCDH7-201ENST00000361762 LOC105371045A0A1W2PR82 267 aa25.35■■□□□ 1.65
PCDH7-201ENST00000361762 DAXXQ9UER7 740 aaPredicted RBP25.35■■□□□ 1.65
PCDH7-201ENST00000361762 SLC4A1APQ9BWU0 796 aaKnown RBP25.26■■□□□ 1.63
PCDH7-201ENST00000361762 GTF3C3Q9Y5Q9 886 aa25.18■■□□□ 1.62
PCDH7-201ENST00000361762 DIEXFQ68CQ4 756 aaKnown RBP25.16■■□□□ 1.62
PCDH7-201ENST00000361762 RTL5Q5HYW3 569 aaPredicted RBP25.14■■□□□ 1.62
PCDH7-201ENST00000361762 BCANQ96GW7 911 aa25.03■■□□□ 1.6
PCDH7-201ENST00000361762 PABPN1Q86U42 306 aaKnown RBP eCLIP24.96■■□□□ 1.59
PCDH7-201ENST00000361762 FAM50AQ14320 339 aaKnown RBP24.91■■□□□ 1.58
PCDH7-201ENST00000361762 ZNF316A6NFI3 1004 aaPredicted RBP24.84■■□□□ 1.57
PCDH7-201ENST00000361762 TRIM52Q96A61 297 aa24.79■■□□□ 1.56
PCDH7-201ENST00000361762 NEUROD1Q13562 356 aa24.75■■□□□ 1.55
PCDH7-201ENST00000361762 ABCC9O60706 1549 aa24.73■■□□□ 1.55
PCDH7-201ENST00000361762 FBLN2P98095 1184 aa24.69■■□□□ 1.54
PCDH7-201ENST00000361762 CLSPNQ9HAW4 1339 aa24.68■■□□□ 1.54
PCDH7-201ENST00000361762 ZNF326Q5BKZ1 582 aaKnown RBP24.65■■□□□ 1.54
PCDH7-201ENST00000361762 ACIN1Q9UKV3 1341 aaKnown RBP24.65■■□□□ 1.54
PCDH7-201ENST00000361762 ARID3CA6NKF2 412 aa24.58■■□□□ 1.52
PCDH7-201ENST00000361762 BCL11AQ9H165 835 aa24.54■■□□□ 1.52
PCDH7-201ENST00000361762 EIF5BO60841 1220 aaKnown RBP24.54■■□□□ 1.52
PCDH7-201ENST00000361762 CDK11AQ9UQ88 783 aaPredicted RBP24.5■■□□□ 1.51
PCDH7-201ENST00000361762 SLC24A1O60721 1099 aa24.48■■□□□ 1.51
PCDH7-201ENST00000361762 P3H3Q8IVL6 736 aa24.42■■□□□ 1.5
PCDH7-201ENST00000361762 PLPPR3Q6T4P5 718 aa24.25■■□□□ 1.47
PCDH7-201ENST00000361762 SCAF1Q9H7N4 1312 aaKnown RBP24.23■■□□□ 1.47
PCDH7-201ENST00000361762 ANP32CO43423 234 aa24.21■■□□□ 1.47
PCDH7-201ENST00000361762 ZNF777Q9ULD5 760 aaPredicted RBP24.21■■□□□ 1.47
PCDH7-201ENST00000361762 NPM2Q86SE8 214 aaKnown RBP24.17■■□□□ 1.46
PCDH7-201ENST00000361762 ZBTB47Q9UFB7 747 aaPredicted RBP24.13■■□□□ 1.45
PCDH7-201ENST00000361762 CANXP27824 592 aaKnown RBP24.12■■□□□ 1.45
PCDH7-201ENST00000361762 ANP32AP39687 249 aaKnown RBP24.11■■□□□ 1.45
PCDH7-201ENST00000361762 FKBP8Q14318 412 aa24.1■■□□□ 1.45
PCDH7-201ENST00000361762 NBR1Q14596 966 aa24.04■■□□□ 1.44
PCDH7-201ENST00000361762 GLIPR1L2Q4G1C9 344 aa23.95■■□□□ 1.42
PCDH7-201ENST00000361762 CHGAP10645 457 aaKnown RBP23.94■■□□□ 1.42
PCDH7-201ENST00000361762 NEFMP07197 916 aa23.91■■□□□ 1.42
PCDH7-201ENST00000361762 ESF1Q9H501 851 aaKnown RBP23.84■■□□□ 1.41
PCDH7-201ENST00000361762 STAG3Q9UJ98 1225 aa23.82■■□□□ 1.4
PCDH7-201ENST00000361762 CSRNP3Q8WYN3 585 aa23.77■■□□□ 1.4
PCDH7-201ENST00000361762 ARXQ96QS3 562 aa23.77■■□□□ 1.4
PCDH7-201ENST00000361762 SENP3Q9H4L4 574 aaPredicted RBP23.77■■□□□ 1.4
PCDH7-201ENST00000361762 SALL2Q9Y467 1007 aaPredicted RBP23.75■■□□□ 1.39
PCDH7-201ENST00000361762 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.71■■□□□ 1.39
PCDH7-201ENST00000361762 SCRIBQ14160 1630 aa23.71■■□□□ 1.39
PCDH7-201ENST00000361762 CHIC2Q9UKJ5 165 aa23.68■■□□□ 1.38
PCDH7-201ENST00000361762 HNRNPUQ00839 825 aaKnown RBP eCLIP23.66■■□□□ 1.38
PCDH7-201ENST00000361762 IRX6P78412 446 aaPredicted RBP23.63■■□□□ 1.37
PCDH7-201ENST00000361762 PLEKHG5O94827 1062 aa23.62■■□□□ 1.37
PCDH7-201ENST00000361762 MIER1Q8N108 512 aa23.61■■□□□ 1.37
PCDH7-201ENST00000361762 ANP32EQ9BTT0 268 aa23.61■■□□□ 1.37
PCDH7-201ENST00000361762 ANP32BQ92688 251 aaKnown RBP23.61■■□□□ 1.37
PCDH7-201ENST00000361762 DDX10Q13206 875 aaKnown RBP23.6■■□□□ 1.37
PCDH7-201ENST00000361762 FAM9BQ8IZU0 186 aa23.6■■□□□ 1.37
PCDH7-201ENST00000361762 NPM1P06748 294 aaKnown RBP eCLIP23.56■■□□□ 1.36
PCDH7-201ENST00000361762 TONSLQ96HA7 1378 aa23.54■■□□□ 1.36
PCDH7-201ENST00000361762 KDM2AQ9Y2K7 1162 aa23.52■■□□□ 1.36
PCDH7-201ENST00000361762 RTN4Q9NQC3 1192 aaKnown RBP23.52■■□□□ 1.36
PCDH7-201ENST00000361762 A0A0G2JS52 829 aa23.49■■□□□ 1.35
PCDH7-201ENST00000361762 CCDC136Q96JN2 1154 aa23.46■■□□□ 1.35
PCDH7-201ENST00000361762 HSP90AA1P07900 732 aaKnown RBP23.45■■□□□ 1.34
PCDH7-201ENST00000361762 ZBTB7CA1YPR0 619 aa23.45■■□□□ 1.34
PCDH7-201ENST00000361762 HIRIP3Q9BW71 556 aaPredicted RBP23.42■■□□□ 1.34
PCDH7-201ENST00000361762 DCAF1Q9Y4B6 1507 aa23.39■■□□□ 1.33
PCDH7-201ENST00000361762 TMC1Q8TDI8 760 aa23.3■■□□□ 1.32
PCDH7-201ENST00000361762 UPF2Q9HAU5 1272 aaKnown RBP23.3■■□□□ 1.32
PCDH7-201ENST00000361762 SENP3-EIF4A1A0A087X0R7 540 aa23.3■■□□□ 1.32
PCDH7-201ENST00000361762 CHMP7Q8WUX9 453 aaPredicted RBP23.29■■□□□ 1.32
PCDH7-201ENST00000361762 KCNH8Q96L42 1107 aa23.29■■□□□ 1.32
PCDH7-201ENST00000361762 C14orf37Q86TY3 774 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms