RNA–Protein interactions for RNA: ENST00000370100.5

SRPK3-201, Transcript of SRSF protein kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SRPK3, Length 1,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK3-201ENST00000370100 NISCHQ9Y2I1 1504 aa39.31■■■■□ 3.88
SRPK3-201ENST00000370100 CCDC180Q9P1Z9 1646 aa34.89■■■■□ 3.18
SRPK3-201ENST00000370100 ABCC9O60706 1549 aa33.95■■■■□ 3.03
SRPK3-201ENST00000370100 DCAF8L2P0C7V8 631 aa32.88■■■□□ 2.85
SRPK3-201ENST00000370100 ZCCHC6Q5VYS8 1495 aaKnown RBP32.78■■■□□ 2.84
SRPK3-201ENST00000370100 RB1CC1Q8TDY2 1594 aa32.74■■■□□ 2.83
SRPK3-201ENST00000370100 NACADO15069 1562 aa32.73■■■□□ 2.83
SRPK3-201ENST00000370100 MYO15BQ96JP2 1530 aa32.55■■■□□ 2.8
SRPK3-201ENST00000370100 DCAF1Q9Y4B6 1507 aa32.5■■■□□ 2.79
SRPK3-201ENST00000370100 UNC13AQ9UPW8 1703 aa32.09■■■□□ 2.73
SRPK3-201ENST00000370100 SCRIBQ14160 1630 aa31.88■■■□□ 2.69
SRPK3-201ENST00000370100 PABPN1Q86U42 306 aaKnown RBP eCLIP31.76■■■□□ 2.67
SRPK3-201ENST00000370100 BICRAQ9NZM4 1560 aa31.72■■■□□ 2.67
SRPK3-201ENST00000370100 SHROOM4Q9ULL8 1493 aa31.35■■■□□ 2.61
SRPK3-201ENST00000370100 DNAJC5BQ9UF47 199 aa30.94■■■□□ 2.54
SRPK3-201ENST00000370100 EIF4G1Q04637 1599 aaKnown RBP30.87■■■□□ 2.53
SRPK3-201ENST00000370100 CC2D2AQ9P2K1 1620 aa30.72■■■□□ 2.51
SRPK3-201ENST00000370100 CECR2Q9BXF3 1484 aa30.62■■■□□ 2.49
SRPK3-201ENST00000370100 SMARCA4P51532 1647 aa30.49■■■□□ 2.47
SRPK3-201ENST00000370100 BAZ1AQ9NRL2 1556 aaPredicted RBP30.47■■■□□ 2.47
SRPK3-201ENST00000370100 MROH2BQ7Z745 1585 aa30.32■■■□□ 2.44
SRPK3-201ENST00000370100 ATAD2BQ9ULI0 1458 aa30.24■■■□□ 2.43
SRPK3-201ENST00000370100 SMARCA2P51531 1590 aa30.23■■■□□ 2.43
SRPK3-201ENST00000370100 NCAPD3P42695 1498 aa30.18■■■□□ 2.42
SRPK3-201ENST00000370100 PEG3Q9GZU2 1588 aa30.14■■■□□ 2.42
SRPK3-201ENST00000370100 HMGXB3Q12766 1538 aa30.06■■■□□ 2.4
SRPK3-201ENST00000370100 WIZO95785 1651 aa30.05■■■□□ 2.4
SRPK3-201ENST00000370100 BAZ1BQ9UIG0 1483 aaKnown RBP30.03■■■□□ 2.4
SRPK3-201ENST00000370100 RSF1Q96T23 1441 aaPredicted RBP30.02■■■□□ 2.4
SRPK3-201ENST00000370100 TOP2AP11388 1531 aaKnown RBP29.69■■■□□ 2.34
SRPK3-201ENST00000370100 SUPT5HO00267 1087 aaKnown RBP29.52■■■□□ 2.32
SRPK3-201ENST00000370100 NESP48681 1621 aa29.43■■■□□ 2.3
SRPK3-201ENST00000370100 LAMC3Q9Y6N6 1575 aa29.38■■■□□ 2.29
SRPK3-201ENST00000370100 CCDC88BA6NC98 1476 aa29.35■■■□□ 2.29
SRPK3-201ENST00000370100 CADPSQ9ULU8 1353 aa29.33■■■□□ 2.29
SRPK3-201ENST00000370100 ERCC6Q03468 1493 aa29.26■■■□□ 2.27
SRPK3-201ENST00000370100 CFTRP13569 1480 aa29.19■■■□□ 2.26
SRPK3-201ENST00000370100 PDS5BQ9NTI5 1447 aa29.17■■■□□ 2.26
SRPK3-201ENST00000370100 KIF21AQ7Z4S6 1674 aa29.15■■■□□ 2.26
SRPK3-201ENST00000370100 PRDM2Q13029 1718 aa29.1■■■□□ 2.25
SRPK3-201ENST00000370100 FANCD2Q9BXW9 1451 aa29.01■■■□□ 2.23
SRPK3-201ENST00000370100 CEP164Q9UPV0 1460 aa28.96■■■□□ 2.23
SRPK3-201ENST00000370100 THOC2Q8NI27 1593 aaKnown RBP28.93■■■□□ 2.22
SRPK3-201ENST00000370100 MRC2Q9UBG0 1479 aa28.85■■■□□ 2.21
SRPK3-201ENST00000370100 CUX2O14529 1486 aa28.81■■■□□ 2.2
SRPK3-201ENST00000370100 WDR62O43379 1518 aa28.74■■■□□ 2.19
SRPK3-201ENST00000370100 URB2Q14146 1524 aaKnown RBP28.69■■■□□ 2.18
SRPK3-201ENST00000370100 ABCC8Q09428 1581 aa28.57■■■□□ 2.16
SRPK3-201ENST00000370100 TOPBP1Q92547 1522 aa28.57■■■□□ 2.16
SRPK3-201ENST00000370100 DNMBPQ6XZF7 1577 aa28.55■■■□□ 2.16
SRPK3-201ENST00000370100 CUX1P39880 1505 aa28.43■■■□□ 2.14
SRPK3-201ENST00000370100 WRNQ14191 1432 aaPredicted RBP eCLIP28.33■■■□□ 2.13
SRPK3-201ENST00000370100 POLA1P09884 1462 aaPredicted RBP28.33■■■□□ 2.13
SRPK3-201ENST00000370100 IFT140Q96RY7 1462 aa28.32■■■□□ 2.12
SRPK3-201ENST00000370100 FGD5Q6ZNL6 1462 aa28.3■■■□□ 2.12
SRPK3-201ENST00000370100 TOP2BQ02880 1626 aa28.25■■■□□ 2.11
SRPK3-201ENST00000370100 BIVM-ERCC5R4GMW8 1640 aa28.25■■■□□ 2.11
SRPK3-201ENST00000370100 SYNJ1O43426 1573 aa28.25■■■□□ 2.11
SRPK3-201ENST00000370100 TARBP1Q13395 1621 aaKnown RBP28.24■■■□□ 2.11
SRPK3-201ENST00000370100 SOGA1O94964 1423 aa28.24■■■□□ 2.11
SRPK3-201ENST00000370100 RAD54L2Q9Y4B4 1467 aa28.22■■■□□ 2.11
SRPK3-201ENST00000370100 ZNF608Q9ULD9 1512 aaPredicted RBP28.19■■■□□ 2.1
SRPK3-201ENST00000370100 EIF4G3O43432 1585 aaKnown RBP28.11■■■□□ 2.09
SRPK3-201ENST00000370100 WDR97A6NE52 1622 aa28.07■■■□□ 2.08
SRPK3-201ENST00000370100 AQRO60306 1485 aaKnown RBP eCLIP28.07■■■□□ 2.08
SRPK3-201ENST00000370100 TDRD9Q8NDG6 1382 aaKnown RBP28.05■■■□□ 2.08
SRPK3-201ENST00000370100 ABCA10Q8WWZ4 1543 aa28.02■■■□□ 2.08
SRPK3-201ENST00000370100 GAPVD1Q14C86 1478 aa27.91■■■□□ 2.06
SRPK3-201ENST00000370100 ABCA5Q8WWZ7 1642 aa27.91■■■□□ 2.06
SRPK3-201ENST00000370100 PBRM1Q86U86 1689 aa27.89■■■□□ 2.06
SRPK3-201ENST00000370100 GRIN2BQ13224 1484 aa27.86■■■□□ 2.05
SRPK3-201ENST00000370100 TRIM41Q8WV44 630 aa27.85■■■□□ 2.05
SRPK3-201ENST00000370100 SNAPC4Q5SXM2 1469 aa27.81■■■□□ 2.04
SRPK3-201ENST00000370100 CHD1O14646 1710 aa27.77■■■□□ 2.04
SRPK3-201ENST00000370100 MAGI1Q96QZ7 1491 aaPredicted RBP27.77■■■□□ 2.04
SRPK3-201ENST00000370100 FBLN2P98095 1184 aa27.75■■■□□ 2.03
SRPK3-201ENST00000370100 KIF27Q86VH2 1401 aa27.72■■■□□ 2.03
SRPK3-201ENST00000370100 OSCARQ8IYS5 282 aa27.71■■■□□ 2.03
SRPK3-201ENST00000370100 ERICH3Q5RHP9 1530 aa27.7■■■□□ 2.03
SRPK3-201ENST00000370100 DNAJC5Q9H3Z4 198 aa27.7■■■□□ 2.03
SRPK3-201ENST00000370100 CHMP7Q8WUX9 453 aaPredicted RBP27.68■■■□□ 2.02
SRPK3-201ENST00000370100 SYNJ2O15056 1496 aa27.66■■■□□ 2.02
SRPK3-201ENST00000370100 CHIC1Q5VXU3 224 aa27.62■■■□□ 2.01
SRPK3-201ENST00000370100 ADAMTS12P58397 1594 aa27.62■■■□□ 2.01
SRPK3-201ENST00000370100 FHAD1B1AJZ9 1412 aa27.58■■■□□ 2.01
SRPK3-201ENST00000370100 IGF1RP08069 1367 aa27.57■■■□□ 2
SRPK3-201ENST00000370100 RUSC2Q8N2Y8 1516 aa27.54■■■□□ 2
SRPK3-201ENST00000370100 CUL7Q14999 1698 aa27.52■■■□□ 2
SRPK3-201ENST00000370100 GRIN2AQ12879 1464 aa27.51■■□□□ 1.99
SRPK3-201ENST00000370100 CARMIL1Q5VZK9 1371 aa27.43■■□□□ 1.98
SRPK3-201ENST00000370100 CLASP1Q7Z460 1538 aa27.38■■□□□ 1.97
SRPK3-201ENST00000370100 CEP170Q5SW79 1584 aa27.37■■□□□ 1.97
SRPK3-201ENST00000370100 NUP160Q12769 1436 aa27.35■■□□□ 1.97
SRPK3-201ENST00000370100 EEA1Q15075 1411 aa27.31■■□□□ 1.96
SRPK3-201ENST00000370100 FAM9AQ8IZU1 332 aaPredicted RBP27.3■■□□□ 1.96
SRPK3-201ENST00000370100 RAPGEF2Q9Y4G8 1499 aa27.29■■□□□ 1.96
SRPK3-201ENST00000370100 CSRNP3Q8WYN3 585 aa27.28■■□□□ 1.96
SRPK3-201ENST00000370100 RIMBP3CA6NJZ7 1639 aa27.25■■□□□ 1.95
SRPK3-201ENST00000370100 RIMBP3BA6NNM3 1639 aa27.25■■□□□ 1.95
SRPK3-201ENST00000370100 RIMBP3Q9UFD9 1639 aa27.25■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms