RNA–Protein interactions for RNA: ENST00000586600.5

CCDC130-204, Transcript of coiled-coil domain containing 130, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC130, Length 1,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-204ENST00000586600 NISCHQ9Y2I1 1504 aa38.58■■■■□ 3.77
CCDC130-204ENST00000586600 CCDC180Q9P1Z9 1646 aa33.94■■■■□ 3.02
CCDC130-204ENST00000586600 ABCC9O60706 1549 aa32.53■■■□□ 2.8
CCDC130-204ENST00000586600 ZCCHC6Q5VYS8 1495 aaKnown RBP32.29■■■□□ 2.76
CCDC130-204ENST00000586600 DCAF8L2P0C7V8 631 aa32.01■■■□□ 2.71
CCDC130-204ENST00000586600 DCAF1Q9Y4B6 1507 aa31.92■■■□□ 2.7
CCDC130-204ENST00000586600 MYO15BQ96JP2 1530 aa31.76■■■□□ 2.68
CCDC130-204ENST00000586600 NACADO15069 1562 aa31.73■■■□□ 2.67
CCDC130-204ENST00000586600 RB1CC1Q8TDY2 1594 aa31.59■■■□□ 2.65
CCDC130-204ENST00000586600 SCRIBQ14160 1630 aa31.08■■■□□ 2.57
CCDC130-204ENST00000586600 SHROOM4Q9ULL8 1493 aa31.02■■■□□ 2.56
CCDC130-204ENST00000586600 UNC13AQ9UPW8 1703 aa30.94■■■□□ 2.54
CCDC130-204ENST00000586600 BICRAQ9NZM4 1560 aa30.62■■■□□ 2.49
CCDC130-204ENST00000586600 PABPN1Q86U42 306 aaKnown RBP eCLIP30.55■■■□□ 2.48
CCDC130-204ENST00000586600 CECR2Q9BXF3 1484 aa30■■■□□ 2.39
CCDC130-204ENST00000586600 BAZ1AQ9NRL2 1556 aaPredicted RBP29.85■■■□□ 2.37
CCDC130-204ENST00000586600 SMARCA4P51532 1647 aa29.78■■■□□ 2.36
CCDC130-204ENST00000586600 MROH2BQ7Z745 1585 aa29.77■■■□□ 2.36
CCDC130-204ENST00000586600 EIF4G1Q04637 1599 aaKnown RBP29.75■■■□□ 2.35
CCDC130-204ENST00000586600 RSF1Q96T23 1441 aaPredicted RBP29.7■■■□□ 2.34
CCDC130-204ENST00000586600 SUPT5HO00267 1087 aaKnown RBP29.59■■■□□ 2.33
CCDC130-204ENST00000586600 WIZO95785 1651 aa29.51■■■□□ 2.31
CCDC130-204ENST00000586600 CC2D2AQ9P2K1 1620 aa29.46■■■□□ 2.31
CCDC130-204ENST00000586600 PEG3Q9GZU2 1588 aa29.45■■■□□ 2.31
CCDC130-204ENST00000586600 ATAD2BQ9ULI0 1458 aa29.42■■■□□ 2.3
CCDC130-204ENST00000586600 SMARCA2P51531 1590 aa29.41■■■□□ 2.3
CCDC130-204ENST00000586600 NCAPD3P42695 1498 aa29.27■■■□□ 2.28
CCDC130-204ENST00000586600 BAZ1BQ9UIG0 1483 aaKnown RBP29.22■■■□□ 2.27
CCDC130-204ENST00000586600 TOP2AP11388 1531 aaKnown RBP29.19■■■□□ 2.26
CCDC130-204ENST00000586600 HMGXB3Q12766 1538 aa29.19■■■□□ 2.26
CCDC130-204ENST00000586600 DNAJC5BQ9UF47 199 aa29.18■■■□□ 2.26
CCDC130-204ENST00000586600 CCDC88BA6NC98 1476 aa28.87■■■□□ 2.21
CCDC130-204ENST00000586600 CADPSQ9ULU8 1353 aa28.47■■■□□ 2.15
CCDC130-204ENST00000586600 CFTRP13569 1480 aa28.46■■■□□ 2.15
CCDC130-204ENST00000586600 LAMC3Q9Y6N6 1575 aa28.39■■■□□ 2.13
CCDC130-204ENST00000586600 NESP48681 1621 aa28.38■■■□□ 2.13
CCDC130-204ENST00000586600 PRDM2Q13029 1718 aa28.33■■■□□ 2.13
CCDC130-204ENST00000586600 PDS5BQ9NTI5 1447 aa28.17■■■□□ 2.1
CCDC130-204ENST00000586600 FANCD2Q9BXW9 1451 aa28.16■■■□□ 2.1
CCDC130-204ENST00000586600 ABCC8Q09428 1581 aa28.08■■■□□ 2.09
CCDC130-204ENST00000586600 KIF21AQ7Z4S6 1674 aa28.07■■■□□ 2.08
CCDC130-204ENST00000586600 CEP164Q9UPV0 1460 aa28.04■■■□□ 2.08
CCDC130-204ENST00000586600 CHIC1Q5VXU3 224 aa28.04■■■□□ 2.08
CCDC130-204ENST00000586600 WRNQ14191 1432 aaPredicted RBP eCLIP27.98■■■□□ 2.07
CCDC130-204ENST00000586600 ERCC6Q03468 1493 aa27.97■■■□□ 2.07
CCDC130-204ENST00000586600 TRIM41Q8WV44 630 aa27.88■■■□□ 2.05
CCDC130-204ENST00000586600 SYNJ1O43426 1573 aa27.88■■■□□ 2.05
CCDC130-204ENST00000586600 CUX1P39880 1505 aa27.87■■■□□ 2.05
CCDC130-204ENST00000586600 TOP2BQ02880 1626 aa27.83■■■□□ 2.05
CCDC130-204ENST00000586600 URB2Q14146 1524 aaKnown RBP27.83■■■□□ 2.05
CCDC130-204ENST00000586600 MRC2Q9UBG0 1479 aa27.82■■■□□ 2.04
CCDC130-204ENST00000586600 BIVM-ERCC5R4GMW8 1640 aa27.82■■■□□ 2.04
CCDC130-204ENST00000586600 DNMBPQ6XZF7 1577 aa27.81■■■□□ 2.04
CCDC130-204ENST00000586600 TOPBP1Q92547 1522 aa27.79■■■□□ 2.04
CCDC130-204ENST00000586600 THOC2Q8NI27 1593 aaKnown RBP27.75■■■□□ 2.03
CCDC130-204ENST00000586600 WDR62O43379 1518 aa27.71■■■□□ 2.03
CCDC130-204ENST00000586600 FGD5Q6ZNL6 1462 aa27.66■■■□□ 2.02
CCDC130-204ENST00000586600 POLA1P09884 1462 aaPredicted RBP27.61■■■□□ 2.01
CCDC130-204ENST00000586600 SOGA1O94964 1423 aa27.52■■■□□ 2
CCDC130-204ENST00000586600 RAD54L2Q9Y4B4 1467 aa27.5■■□□□ 1.99
CCDC130-204ENST00000586600 CUX2O14529 1486 aa27.49■■□□□ 1.99
CCDC130-204ENST00000586600 TARBP1Q13395 1621 aaKnown RBP27.43■■□□□ 1.98
CCDC130-204ENST00000586600 ABCA10Q8WWZ4 1543 aa27.41■■□□□ 1.98
CCDC130-204ENST00000586600 IFT140Q96RY7 1462 aa27.41■■□□□ 1.98
CCDC130-204ENST00000586600 WDR97A6NE52 1622 aa27.39■■□□□ 1.97
CCDC130-204ENST00000586600 RUSC2Q8N2Y8 1516 aa27.36■■□□□ 1.97
CCDC130-204ENST00000586600 FAM9AQ8IZU1 332 aaPredicted RBP27.33■■□□□ 1.97
CCDC130-204ENST00000586600 KIF27Q86VH2 1401 aa27.33■■□□□ 1.96
CCDC130-204ENST00000586600 EEA1Q15075 1411 aa27.3■■□□□ 1.96
CCDC130-204ENST00000586600 TDRD9Q8NDG6 1382 aaKnown RBP27.29■■□□□ 1.96
CCDC130-204ENST00000586600 ZNF608Q9ULD9 1512 aaPredicted RBP27.25■■□□□ 1.95
CCDC130-204ENST00000586600 ABCA5Q8WWZ7 1642 aa27.24■■□□□ 1.95
CCDC130-204ENST00000586600 GAPVD1Q14C86 1478 aa27.21■■□□□ 1.95
CCDC130-204ENST00000586600 AQRO60306 1485 aaKnown RBP eCLIP27.21■■□□□ 1.953e-6■■■■□ 20.5
CCDC130-204ENST00000586600 CSRNP3Q8WYN3 585 aa27.19■■□□□ 1.94
CCDC130-204ENST00000586600 EIF4G3O43432 1585 aaKnown RBP27.17■■□□□ 1.94
CCDC130-204ENST00000586600 IGF1RP08069 1367 aa27.13■■□□□ 1.93
CCDC130-204ENST00000586600 PBRM1Q86U86 1689 aa27.11■■□□□ 1.93
CCDC130-204ENST00000586600 ERICH3Q5RHP9 1530 aa27.1■■□□□ 1.93
CCDC130-204ENST00000586600 GRIN2BQ13224 1484 aa27.09■■□□□ 1.93
CCDC130-204ENST00000586600 CUL7Q14999 1698 aa27■■□□□ 1.91
CCDC130-204ENST00000586600 PRXQ9BXM0 1461 aa26.99■■□□□ 1.91
CCDC130-204ENST00000586600 CARMIL1Q5VZK9 1371 aa26.99■■□□□ 1.91
CCDC130-204ENST00000586600 KIF21BO75037 1637 aa26.97■■□□□ 1.91
CCDC130-204ENST00000586600 SNAPC4Q5SXM2 1469 aa26.95■■□□□ 1.91
CCDC130-204ENST00000586600 EHMT2Q96KQ7 1210 aa26.94■■□□□ 1.9
CCDC130-204ENST00000586600 LOC105371045A0A1W2PR82 267 aa26.93■■□□□ 1.9
CCDC130-204ENST00000586600 MAGI1Q96QZ7 1491 aaPredicted RBP26.93■■□□□ 1.9
CCDC130-204ENST00000586600 ADAMTS12P58397 1594 aa26.92■■□□□ 1.9
CCDC130-204ENST00000586600 RAPGEF2Q9Y4G8 1499 aa26.91■■□□□ 1.9
CCDC130-204ENST00000586600 FHAD1B1AJZ9 1412 aa26.9■■□□□ 1.9
CCDC130-204ENST00000586600 GOLGA3Q08378 1498 aa26.88■■□□□ 1.89
CCDC130-204ENST00000586600 SYNJ2O15056 1496 aa26.82■■□□□ 1.88
CCDC130-204ENST00000586600 UBTFP17480 764 aaKnown RBP26.78■■□□□ 1.88
CCDC130-204ENST00000586600 CHMP7Q8WUX9 453 aaPredicted RBP26.78■■□□□ 1.88
CCDC130-204ENST00000586600 FBLN2P98095 1184 aa26.77■■□□□ 1.88
CCDC130-204ENST00000586600 GRIN2AQ12879 1464 aa26.75■■□□□ 1.87
CCDC130-204ENST00000586600 CHD1O14646 1710 aa26.71■■□□□ 1.87
CCDC130-204ENST00000586600 TNIKQ9UKE5 1360 aa26.69■■□□□ 1.86
CCDC130-204ENST00000586600 CTTNBP2Q8WZ74 1663 aa26.64■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms