RNA–Protein interactions for RNA: ENST00000617472.4

TMC4-209, Transcript of transmembrane channel like 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMC4, Length 2,413 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC4-209ENST00000617472 NISCHQ9Y2I1 1504 aa36.95■■■■□ 3.51
TMC4-209ENST00000617472 CCDC180Q9P1Z9 1646 aa31.89■■■□□ 2.7
TMC4-209ENST00000617472 ZCCHC6Q5VYS8 1495 aaKnown RBP31.09■■■□□ 2.57
TMC4-209ENST00000617472 DCAF8L2P0C7V8 631 aa30.84■■■□□ 2.53
TMC4-209ENST00000617472 SHROOM4Q9ULL8 1493 aa30.84■■■□□ 2.53
TMC4-209ENST00000617472 DCAF1Q9Y4B6 1507 aa30.32■■■□□ 2.44
TMC4-209ENST00000617472 ABCC9O60706 1549 aa30.23■■■□□ 2.43
TMC4-209ENST00000617472 SUPT5HO00267 1087 aaKnown RBP29.81■■■□□ 2.36
TMC4-209ENST00000617472 MYO15BQ96JP2 1530 aa29.77■■■□□ 2.36
TMC4-209ENST00000617472 SCRIBQ14160 1630 aa29.73■■■□□ 2.35
TMC4-209ENST00000617472 NACADO15069 1562 aa29.64■■■□□ 2.34
TMC4-209ENST00000617472 RB1CC1Q8TDY2 1594 aa29.37■■■□□ 2.29
TMC4-209ENST00000617472 UNC13AQ9UPW8 1703 aa28.99■■■□□ 2.23
TMC4-209ENST00000617472 RSF1Q96T23 1441 aaPredicted RBP28.87■■■□□ 2.21
TMC4-209ENST00000617472 CECR2Q9BXF3 1484 aa28.86■■■□□ 2.21
TMC4-209ENST00000617472 MROH2BQ7Z745 1585 aa28.68■■■□□ 2.18
TMC4-209ENST00000617472 PABPN1Q86U42 306 aaKnown RBP eCLIP28.68■■■□□ 2.18
TMC4-209ENST00000617472 BICRAQ9NZM4 1560 aa28.59■■■□□ 2.17
TMC4-209ENST00000617472 CHIC1Q5VXU3 224 aa28.53■■■□□ 2.16
TMC4-209ENST00000617472 WIZO95785 1651 aa28.52■■■□□ 2.16
TMC4-209ENST00000617472 BAZ1AQ9NRL2 1556 aaPredicted RBP28.47■■■□□ 2.15
TMC4-209ENST00000617472 SMARCA4P51532 1647 aa28.36■■■□□ 2.13
TMC4-209ENST00000617472 TOP2AP11388 1531 aaKnown RBP28.04■■■□□ 2.08
TMC4-209ENST00000617472 CCDC88BA6NC98 1476 aa27.87■■■□□ 2.05
TMC4-209ENST00000617472 SMARCA2P51531 1590 aa27.87■■■□□ 2.05
TMC4-209ENST00000617472 PEG3Q9GZU2 1588 aa27.84■■■□□ 2.05
TMC4-209ENST00000617472 TRIM41Q8WV44 630 aa27.83■■■□□ 2.05
TMC4-209ENST00000617472 ATAD2BQ9ULI0 1458 aa27.8■■■□□ 2.04
TMC4-209ENST00000617472 EIF4G1Q04637 1599 aaKnown RBP27.74■■■□□ 2.03
TMC4-209ENST00000617472 BAZ1BQ9UIG0 1483 aaKnown RBP27.7■■■□□ 2.02
TMC4-209ENST00000617472 LOC105371045A0A1W2PR82 267 aa27.66■■■□□ 2.02
TMC4-209ENST00000617472 FAM9AQ8IZU1 332 aaPredicted RBP27.58■■■□□ 2.01
TMC4-209ENST00000617472 ABCC8Q09428 1581 aa27.56■■■□□ 2
TMC4-209ENST00000617472 NCAPD3P42695 1498 aa27.4■■□□□ 1.98
TMC4-209ENST00000617472 EHMT2Q96KQ7 1210 aa27.38■■□□□ 1.97
TMC4-209ENST00000617472 HMGXB3Q12766 1538 aa27.37■■□□□ 1.97
TMC4-209ENST00000617472 CC2D2AQ9P2K1 1620 aa27.25■■□□□ 1.95
TMC4-209ENST00000617472 WRNQ14191 1432 aaPredicted RBP eCLIP27.17■■□□□ 1.94
TMC4-209ENST00000617472 SYNJ1O43426 1573 aa27.1■■□□□ 1.93
TMC4-209ENST00000617472 SOGA1O94964 1423 aa27.08■■□□□ 1.93
TMC4-209ENST00000617472 RUSC2Q8N2Y8 1516 aa27■■□□□ 1.91
TMC4-209ENST00000617472 CFTRP13569 1480 aa26.95■■□□□ 1.9
TMC4-209ENST00000617472 TOP2BQ02880 1626 aa26.84■■□□□ 1.89
TMC4-209ENST00000617472 CADPSQ9ULU8 1353 aa26.8■■□□□ 1.88
TMC4-209ENST00000617472 CSRNP3Q8WYN3 585 aa26.8■■□□□ 1.88
TMC4-209ENST00000617472 PRDM2Q13029 1718 aa26.79■■□□□ 1.88
TMC4-209ENST00000617472 BIVM-ERCC5R4GMW8 1640 aa26.77■■□□□ 1.88
TMC4-209ENST00000617472 PCGF6Q9BYE7 350 aa26.77■■□□□ 1.88
TMC4-209ENST00000617472 EEA1Q15075 1411 aa26.76■■□□□ 1.87
TMC4-209ENST00000617472 CUX1P39880 1505 aa26.76■■□□□ 1.87
TMC4-209ENST00000617472 DNAJC5BQ9UF47 199 aa26.76■■□□□ 1.87
TMC4-209ENST00000617472 NESP48681 1621 aa26.67■■□□□ 1.86
TMC4-209ENST00000617472 UBTFP17480 764 aaKnown RBP26.64■■□□□ 1.86
TMC4-209ENST00000617472 GOLGA3Q08378 1498 aa26.57■■□□□ 1.84
TMC4-209ENST00000617472 FANCD2Q9BXW9 1451 aa26.57■■□□□ 1.84
TMC4-209ENST00000617472 CEP162Q5TB80 1403 aa26.54■■□□□ 1.84
TMC4-209ENST00000617472 TNIKQ9UKE5 1360 aa26.52■■□□□ 1.84
TMC4-209ENST00000617472 CEP164Q9UPV0 1460 aa26.51■■□□□ 1.84
TMC4-209ENST00000617472 KIF21BO75037 1637 aa26.5■■□□□ 1.83
TMC4-209ENST00000617472 PPARGC1BQ86YN6 1023 aaKnown RBP26.49■■□□□ 1.83
TMC4-209ENST00000617472 RAPGEF2Q9Y4G8 1499 aa26.48■■□□□ 1.83
TMC4-209ENST00000617472 TRIM26Q12899 539 aaPredicted RBP26.43■■□□□ 1.82
TMC4-209ENST00000617472 FGD5Q6ZNL6 1462 aa26.43■■□□□ 1.82
TMC4-209ENST00000617472 LAMC3Q9Y6N6 1575 aa26.42■■□□□ 1.82
TMC4-209ENST00000617472 KIF27Q86VH2 1401 aa26.4■■□□□ 1.82
TMC4-209ENST00000617472 RANGAP1P46060 587 aaPredicted RBP26.38■■□□□ 1.81
TMC4-209ENST00000617472 CUX2O14529 1486 aa26.35■■□□□ 1.81
TMC4-209ENST00000617472 DNMBPQ6XZF7 1577 aa26.31■■□□□ 1.8
TMC4-209ENST00000617472 TOPBP1Q92547 1522 aa26.3■■□□□ 1.8
TMC4-209ENST00000617472 PRXQ9BXM0 1461 aa26.3■■□□□ 1.8
TMC4-209ENST00000617472 KIF21AQ7Z4S6 1674 aa26.28■■□□□ 1.8
TMC4-209ENST00000617472 TTBK1Q5TCY1 1321 aaPredicted RBP26.27■■□□□ 1.8
TMC4-209ENST00000617472 RAD54L2Q9Y4B4 1467 aa26.26■■□□□ 1.79
TMC4-209ENST00000617472 POLA1P09884 1462 aaPredicted RBP26.24■■□□□ 1.79
TMC4-209ENST00000617472 URB2Q14146 1524 aaKnown RBP26.24■■□□□ 1.79
TMC4-209ENST00000617472 PDS5BQ9NTI5 1447 aa26.24■■□□□ 1.79
TMC4-209ENST00000617472 CLIP1P30622 1438 aa26.23■■□□□ 1.79
TMC4-209ENST00000617472 ERICH3Q5RHP9 1530 aa26.22■■□□□ 1.79
TMC4-209ENST00000617472 IGF1RP08069 1367 aa26.17■■□□□ 1.78
TMC4-209ENST00000617472 HRCP23327 699 aa26.09■■□□□ 1.77
TMC4-209ENST00000617472 ABCA10Q8WWZ4 1543 aa26.08■■□□□ 1.77
TMC4-209ENST00000617472 CARMIL1Q5VZK9 1371 aa26.05■■□□□ 1.76
TMC4-209ENST00000617472 VPS8Q8N3P4 1428 aa26■■□□□ 1.75
TMC4-209ENST00000617472 TDRD9Q8NDG6 1382 aaKnown RBP25.99■■□□□ 1.75
TMC4-209ENST00000617472 WDR97A6NE52 1622 aa25.99■■□□□ 1.75
TMC4-209ENST00000617472 ARAP1Q96P48 1450 aa25.92■■□□□ 1.74
TMC4-209ENST00000617472 MRC2Q9UBG0 1479 aa25.9■■□□□ 1.74
TMC4-209ENST00000617472 ABCA5Q8WWZ7 1642 aa25.87■■□□□ 1.73
TMC4-209ENST00000617472 TARBP1Q13395 1621 aaKnown RBP25.86■■□□□ 1.73
TMC4-209ENST00000617472 ARHGAP35Q9NRY4 1499 aa25.86■■□□□ 1.73
TMC4-209ENST00000617472 GAPVD1Q14C86 1478 aa25.85■■□□□ 1.73
TMC4-209ENST00000617472 CUL7Q14999 1698 aa25.83■■□□□ 1.73
TMC4-209ENST00000617472 APLP2Q06481 763 aa25.83■■□□□ 1.72
TMC4-209ENST00000617472 ERCC6Q03468 1493 aa25.81■■□□□ 1.72
TMC4-209ENST00000617472 AQRO60306 1485 aaKnown RBP eCLIP25.75■■□□□ 1.71
TMC4-209ENST00000617472 P3H3Q8IVL6 736 aa25.73■■□□□ 1.71
TMC4-209ENST00000617472 WDR62O43379 1518 aa25.72■■□□□ 1.71
TMC4-209ENST00000617472 PBRM1Q86U86 1689 aa25.69■■□□□ 1.7
TMC4-209ENST00000617472 CTTNBP2Q8WZ74 1663 aa25.69■■□□□ 1.7
TMC4-209ENST00000617472 ZNF608Q9ULD9 1512 aaPredicted RBP25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms